Canis lupus familiaris (dog): 483205
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Entry
483205 CDS
T01007
Symbol
RORC
Name
(RefSeq) nuclear receptor ROR-gamma isoform X1
KO
K08534
RAR-related orphan receptor gamma
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04659
Th17 cell differentiation
cfa04710
Circadian rhythm
cfa05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
483205 (RORC)
09159 Environmental adaptation
04710 Circadian rhythm
483205 (RORC)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
483205 (RORC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfa03000
]
483205 (RORC)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cfa03310
]
483205 (RORC)
Transcription factors [BR:
cfa03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
483205 (RORC)
Nuclear receptors [BR:
cfa03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
483205 (RORC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
483205
NCBI-ProteinID:
XP_005630882
Ensembl:
ENSCAFG00000012884
VGNC:
45697
UniProt:
A0A8C0MZK9
A0A8I3PTL7
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All DBs
Position
17:complement(60263366..60285188)
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AA seq
518 aa
AA seq
DB search
MDRAPQRQHRASQELLAAKKTHTSQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQ
CNVVYSCTRQQNCPIDRTSRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQK
QLQRQQQQQRGQVAKTPPAGGQGADPLACPIGLPDGQLPLGSSPDLPEAAACPPGLLRAP
GSGSSYPSSLAKAGPDRASYHLEYSPQRGKAEASGGFYGTGSQLSLERCALHFEDARPPG
LEEPGRGPDTYCSPSSHSALEASYASLMETEHLVQNVCKSYRETCQLRLEDLLRQRPNIF
SREEVASYQRKSMWEMWERCAHRLTEAIQYVVEFAKRLSGFMELCQNDQIVLLKAGAMEV
VLVRMCRAYNADNHTVFFEGKYGGMELFRALGCSELISSIFDFSRSLSSLRFSEDEIALY
TALVLINANRPGLQEKRKVEQLQHNLEQAFHHHLYRTHRQGILAKLPPKGKLRSLCSQHV
EKLHTFQHLHPIVVQATFPPLYKELFSTEIESPEGLSE
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggacagggccccacagagacagcaccgagcctcgcaggagctgctggctgccaagaag
acccacacctcgcaaatcgaagtgattccttgcaaaatctgtggagacaagtcatctggg
atccactacggggtgatcacctgtgagggatgcaagggtttcttccgccggagccagcag
tgtaacgtggtctactcctgcacccgccagcagaactgccccatcgaccgcaccagccga
aaccgatgtcaacactgccgcctgcagaaatgcctggcactgggcatgtcccgagatgct
gtcaagttcggccgcatgtccaagaagcagagggacagcctgcacgccgaggtgcagaaa
cagctgcagcggcagcaacagcagcagcgaggacaggtggccaagaccccaccagcgggg
ggccagggagctgaccccctcgcctgccccatagggctcccagatgggcagctgcccctg
ggctcatcacctgacctacccgaggccgcggcctgcccccctggcctcctgagagcccca
ggctccggctcctcctaccccagcagcctggccaaggctgggcccgacagggcctcgtac
cacctggaatacagcccccagcggggtaaggctgaggccagcggtggcttctacggcaca
ggcagccagctgagcctggaaagatgcgcacttcactttgaagacgccaggcctcctgga
ctggaggagccaggacggggcccagacacctactgtagccccagttcccacagcgccttg
gaggcatcctatgcctccctgatggagactgagcacctggtacagaatgtttgtaagtcc
taccgagagacgtgtcagttgcggctggaggacctgctacggcagcgccctaacatcttc
tcccgggaggaggtggccagctaccagaggaagtccatgtgggagatgtgggaacgctgt
gcccaccgcctcaccgaggccattcagtacgtggtggagttcgcgaagaggctctcaggc
tttatggagctctgccagaatgaccagattgtgcttctcaaagcaggagcaatggaagtg
gttctggtccggatgtgccgggcttacaatgctgacaaccacacagtctttttcgaaggc
aaatacggtggcatggagctgttccgagccttgggctgcagcgagctcatcagctccatc
tttgacttctcccgctccctgagttccttgcgcttttctgaggatgagattgctctctac
acggccctggtcctcatcaacgccaaccgtccggggctccaagagaagaggaaagtagaa
cagctacagcacaacctggagcaggcttttcatcaccatctctacaggactcaccgccaa
ggcatcctggcaaagctgccgcccaaggggaagcttcggagcctgtgcagccagcatgtg
gaaaagctgcacactttccaacatctccaccccatcgtggtccaagccactttccctcca
ctctacaaggaactcttcagcactgaaatcgagtcacctgaagggctgtccgagtga
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