Canis lupus familiaris (dog): 483420
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Entry
483420 CDS
T01007
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04068
FoxO signaling pathway
cfa05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
483420 (RAG1)
09160 Human Diseases
09163 Immune disease
05340 Primary immunodeficiency
483420 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cfa04121
]
483420 (RAG1)
Enzymes [BR:
cfa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
483420 (RAG1)
Ubiquitin system [BR:
cfa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
483420 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
zf-RING_2
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
483420
NCBI-ProteinID:
XP_540538
VGNC:
45326
UniProt:
A0A8C0SIL6
A0A8I3PC48
LinkDB
All DBs
Position
18:complement(31238815..31241946)
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AA seq
1043 aa
AA seq
DB search
MAVSLPPTLGLTSAPDEIQHPHIKFSEWKFKLFRVRSLEKAPEEAQIEKKVSSEGKPSLE
QSPAVPDKADGQEAALSPPALKAHPKFLKEPHDDGKTRDKAIHQANLRHLCRICGNSLKT
DRRNRRYPVHGPVDGKTQVLLRKKERRATSWPDLIAKVFRIDVKADVDSVHPTNFCHKCW
KVMYRRFSSAPRGVCFPRKAAPEWLPHAPSCDLCRAARQGLKRKSPQPSAQLSKRLRTVL
ERAGRARGHRRRARAGLRDSGATGKASDCGNVHLGTELLAVDFPAHFVKSISCRICEHIL
ADPVETTCKHVFCRVCILRRLKATGSYCPCCRYPCFPTDLESPGRSFLSILNSLMVRCPA
KGCDEEVSLERYNQHVAGHKDSDQTFVHINKGGRPRQPLLSLTRRAQKHRLRELKLQVKA
FADREEGGDVKSVCLALFLLVLRARNEHRQADELEAVLQGRGPGLQPAVCLAIRVNTFLS
CSQYHKMYRTVKAITGRQIFQPLHALRAAEKALLPGHHAFEWQPPLQNVSSSAHVGIIDG
LSGLSSCVDDYPVGTIAKRFRYDAALVSALMDMQEDLLEGVRARGLDDHLGGPFTVVVKE
SCDGMGDVSEKHGGGPAVPEKAVRFSFTVMRITVAQGSESVQVFEEGKPNSELCCKPLCL
MLADEADHETLTAILSPLVAEREAMKSSCLLLEMGGALRTFRFIFRGTGYDEKLVREVEG
LEASGSVYICTLCDATRLEASQNLVLHSITRSHSENLERYEVWRSNPYHESVDELRDRVK
GVSSKPFIETVPSIDALHCDIGNAAEFYKIFQLEIGQAYSKAGASKEERRRWQATLDKHL
RKKMNLKPIMRMNGNFARKLMTKETVEAVCELIPSEERHEALRELMDLYLKMKPVWRSSC
PAKECPESLCQYSFNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWA
SEGNESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQRFMNAHNGYKKSGPPFN
SQAGLGDPLGLEDSLETQDSMEF
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctctttgccacccaccctgggactcacttctgccccagatgagatccagcac
ccacatattaaattttcagaatggaaatttaaactgttcagggtgcggtctcttgaaaag
gcacctgaagaagctcaaatagaaaagaaagtttcctccgaggggaaaccctctctggag
caatctccagcagtcccggacaaggctgatggtcaggaggcagccctgagtccaccagca
ttgaaagctcaccctaagtttctgaaggaaccccacgatgatgggaaaacaagagacaaa
gcgatccaccaagccaaccttcgacacctctgccgtatctgtgggaattctttgaaaacc
gacaggcgtaataggaggtatccggtccacgggcccgtggatggcaaaacccaagtcctt
ctacggaagaaggaaaggagggccacatcctggccagacctcattgccaaggttttccgg
atcgatgtgaaagcagacgttgactccgtccaccccaccaacttctgccacaagtgctgg
aaggtcatgtacaggaggtttagcagcgccccacgcggggtttgcttcccgaggaaggca
gccccggagtggctcccccacgcgccctcctgtgacctctgccgtgctgcccgccaggga
ctcaagaggaagagtcctcagccaagtgcacagctcagcaaaaggctcagaaccgtgctt
gagcgggcgggcagggcccgtgggcaccggagaagagcccgggccgggctccgcgacagc
ggggcgaccgggaaggcctccgactgcgggaacgtgcaccttggtaccgagctcctcgcg
gtggacttcccggcccacttcgtgaagtccatctcctgccggatctgtgagcacatcctg
gcggaccccgtggagaccacgtgcaagcacgtgttttgcagggtctgcattctccgccgc
ctcaaagccacgggcagctactgtccctgctgccggtatccctgcttccctactgacctg
gagagcccggggaggtcctttctgagcatcctgaactccctgatggtgagatgtccggcc
aaagggtgcgacgaggaggtcagcttggagaggtacaaccagcacgtggcgggccacaag
gactcggaccagacttttgtgcacatcaacaagggggggcggccgcgccagcccctgctg
tcgctgacccggagggctcagaagcaccgcctgcgggagctcaagctgcaggtcaaggcc
ttcgccgaccgggaggaggggggcgacgtgaagtccgtgtgcctggccctgttcctgctg
gtgctgcgggccaggaacgagcaccggcaggccgacgagctggaggccgtcctgcagggc
cgcggccccggcctgcagccggccgtctgcctggccatccgggtcaacaccttcctcagc
tgcagccagtaccacaagatgtaccggaccgtgaaggccatcaccgggaggcagatcttt
cagccgctgcacgccctgcgggccgccgagaaggccctcctgcccggccaccacgccttc
gagtggcagccgcctctgcagaacgtgtcctccagcgcccacgttggcatcatcgacggc
ctgtcgggcctgtcctcctgcgtggacgactaccccgtgggcaccatcgccaagcggttc
cgctacgatgcggccctggtgtccgctctgatggacatgcaggaggacctcctggaaggc
gtgagggcccggggcctggacgaccacctcgggggcccgttcaccgtggtggtcaaggag
tcctgcgacggcatgggggacgtgagcgagaagcacggcggcggcccggccgtccccgag
aaggccgtgcggttctcgttcacggtcatgaggatcaccgtggcccagggctcggaaagc
gtgcaggtgttcgaggagggcaaaccgaactcggagctgtgctgcaagccgctgtgtctc
atgctggcggacgaggccgaccacgagaccctgacggccatcctgagcccgctggtcgcc
gagagggaggccatgaagagcagctgcctcctgctggagatggggggcgcgctgcggacc
ttcaggttcatcttcaggggcaccggatacgacgagaagctggtccgggaggtcgaaggc
ctcgaggcctcgggctcggtctacatctgcaccctctgcgacgccacccgcctggaagcc
tctcagaacctcgtcctgcactccatcaccaggagccactcggagaacctggagcgctat
gaggtctggcgctccaacccctaccacgagtccgtggacgagctgagggaccgggtcaag
ggcgtctcctccaagcccttcattgagacggtgccttccatcgatgcgctccactgcgac
atcggcaacgcggccgagttctacaagatcttccagctcgagataggccaggcctacagc
aaggccggtgcctccaaggaggagcggagaaggtggcaggccacgctggacaagcatctc
cgcaagaagatgaacctgaagcccatcatgaggatgaacggcaacttcgccaggaagctc
atgaccaaagagacggttgaagcagtctgtgaactgatcccctctgaggagaggcacgaa
gccctgagggagctcatggacctttacctgaagatgaagcccgtatggagatcttcgtgt
cccgcgaaagagtgcccagaatccctgtgccagtacagcttcaactcccagcgtttcgcc
gagctcctgtctaccaagttcaagtatagatatgagggcaaaatcaccaactacttccac
aaaaccctggcccacgtccccgagattatcgagagagatggttccatcggggcctgggcg
agcgagggcaacgagtctggcaacaaactgttcaggcgcttccggaaaatgaacgccagg
cagtccaagtgctacgagatggaagacgtcctgaaacaccactggctgtacacctccaaa
tacctgcagaggtttatgaatgctcacaatgggtataaaaagtccggccctcccttcaac
tcacaggcaggcttaggcgatccattaggcctagaggactctctggaaactcaagattcg
atggaattttaa
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