Canis lupus familiaris (dog): 483632
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Entry
483632 CDS
T01007
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04136
Autophagy - other
cfa04140
Autophagy - animal
cfa04211
Longevity regulating pathway
cfa05010
Alzheimer disease
cfa05014
Amyotrophic lateral sclerosis
cfa05016
Huntington disease
cfa05017
Spinocerebellar ataxia
cfa05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
483632 (ATG13)
04136 Autophagy - other
483632 (ATG13)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
483632 (ATG13)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
483632 (ATG13)
05014 Amyotrophic lateral sclerosis
483632 (ATG13)
05016 Huntington disease
483632 (ATG13)
05017 Spinocerebellar ataxia
483632 (ATG13)
05022 Pathways of neurodegeneration - multiple diseases
483632 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfa04131
]
483632 (ATG13)
03029 Mitochondrial biogenesis [BR:
cfa03029
]
483632 (ATG13)
Membrane trafficking [BR:
cfa04131
]
Autophagy
Autophagosome formation proteins
ULK complex
483632 (ATG13)
Atg1 complex
483632 (ATG13)
Mitochondrial biogenesis [BR:
cfa03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
483632 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
483632
NCBI-ProteinID:
XP_005631334
Ensembl:
ENSCAFG00000009170
VGNC:
38217
UniProt:
A0A8C0YX87
A0A8I3PTC5
LinkDB
All DBs
Position
18:complement(41563260..41615540)
Genome browser
AA seq
550 aa
AA seq
DB search
METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLNGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGV
TYPSVEDSQEVCTTSFSTSPPSQCVFTVTKAHFQTPTPVVTDTLRVPMAGLAFSHQLSSS
RLSYQPAALGVGSADLAYPVVFAAGLNTTHPHQLMVPGKEGGVPLAPNQPAHGAQADQER
LATYTPSDGAHCAVTPSSSEDTETVSNSSEGRASPHDVLETIFVRKVGAFVNKPINQVTL
TSLDIPFAMFAPKNLELEDADPMVNPPDSPETESPLQGSLHSDGSSGGSSGNTHDDFVMI
DFKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVR
EFDAFVETLQ
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgatctcaattcccaggacagaaaggacctggacaagtttattaaatttttt
gccctcaagactgtccaagtgattgtccaggctcgacttggcgagaagatttgtactcgt
tcgtcttcatccccaacgggttcagattggttcaatttagcaatcaaagacatcccagag
gttacacatgaagcaaaaaaggcactggccgggcagttgcctgcagtcgggagatcgatg
tgtgtggagatctctctcaagacatctgagggagattctatggaactagaaatttggtgt
ctcgaaatgaatgaaaagtgtgataaagagattaaagtgtcctacacggtgtacaacaga
ctgtcgctgctgctgaagtccctccttgccataactagggtgacaccagcttatagactc
tccagaaaacaggggcatgaatatgtcatattgtacaggatatattttggggaagttcag
ctgaatggcttaggagaaggtttccagacagttcgtgttgggacagtaggcacccctgtg
ggcaccatcactctttcttgcgcttacagaattaacttggcatttatgtctaccaggcaa
tttgagaggaccccacctatcatggggattatcattgatcactttgtggaccgtccctac
cccagctcctcacccatgcacccctgcaattacagaactgctggtgaggacactggagta
acatatccttctgtggaagattctcaagaagtgtgtaccacctctttttccacctcccct
ccatctcagtgtgtgtttactgtcacaaaggcacattttcagacccctactcctgtggtg
acggacactctgagggtccccatggcaggactggccttttcccatcaactctcaagctct
cgcctttcctatcagcctgctgccctgggcgttggatcagctgacctggcttacccagta
gtgtttgctgctggcctaaacaccacacaccctcaccagctcatggttcccgggaaggaa
ggtggggtaccccttgctcccaaccaacctgctcacggtgcccaggctgaccaggagaga
ctggcaacctacaccccttctgacggggcccactgcgctgtcacaccttccagcagcgag
gatactgaaactgtatcaaacagcagtgagggccgggcatccccccacgatgtcttggag
accatctttgtccgaaaagtgggggcttttgtcaacaagcccatcaaccaggtgaccctg
accagtctggacataccctttgccatgtttgctcccaagaatttggagctggaggatgct
gatcccatggtgaatcctccagattccccagagactgaatctcctctccagggcagcctg
cactctgatggctccagtgggggcagcagtggcaatacccatgatgactttgttatgatc
gacttcaaaccggctttttctaaagacgacattcttccgatggacttggggaccttctat
cgtgaatttcagaatcctcctcagctgagcagcctctccatagatatcggggcacagtcc
atggctgaggacttggactcactaccagagaagctggctgtgcacgagaagaatgtccga
gagtttgatgcctttgtagaaaccctgcagtaa
DBGET
integrated database retrieval system
