Canis lupus familiaris (dog): 483780
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Entry
483780 CDS
T01007
Symbol
NXF1
Name
(RefSeq) nuclear RNA export factor 1
KO
K14284
nuclear RNA export factor
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03008
Ribosome biogenesis in eukaryotes
cfa03013
Nucleocytoplasmic transport
cfa03015
mRNA surveillance pathway
cfa05014
Amyotrophic lateral sclerosis
cfa05164
Influenza A
cfa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
483780 (NXF1)
03015 mRNA surveillance pathway
483780 (NXF1)
03008 Ribosome biogenesis in eukaryotes
483780 (NXF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
483780 (NXF1)
05168 Herpes simplex virus 1 infection
483780 (NXF1)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
483780 (NXF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfa03019
]
483780 (NXF1)
03009 Ribosome biogenesis [BR:
cfa03009
]
483780 (NXF1)
Messenger RNA biogenesis [BR:
cfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
483780 (NXF1)
mRNA cycle factors
Stress granule specific factors
483780 (NXF1)
Ribosome biogenesis [BR:
cfa03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
483780 (NXF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
LRR_4
LRR_8
UBA_8
LRR_9
Motif
Other DBs
NCBI-GeneID:
483780
NCBI-ProteinID:
XP_540901
Ensembl:
ENSCAFG00000015594
VGNC:
44071
UniProt:
A0A8C0T1C8
A0A8I3N9B5
LinkDB
All DBs
Position
18:52490545..52501204
Genome browser
AA seq
618 aa
AA seq
DB search
MADEGKAYNEHDDRVSFPQRRKKGRGPFRWKYGEGNRRSGRGGSGIRSSRLEEDDRDVAM
SDAQDVPRIRHNPYPPRPNRRGDSWHDRDRIHVTVRRDRILPERGGAGTSQDGTSKNWFK
ITIPYGRKYDKSWLLSVIQSKCSVPFTPIEFHYENTRAQFFVEDASTASALKAVNYKILD
QENRRISIIINSSVPPHSVQNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQ
NIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSLVQKAPNLKILNLSGN
ELKSERELDKVKGLKLEELWLDGNPLCDTFRDQSTYISAIRERFPKLLRLDGHELPPPIA
FDVEAPTMLPPCKGSYFGTETLKNLVLHFLQQYYAVYDSGDRQRLLDAYHDGACCSLSIP
FTPQNPARSNLAEYFKDSRNVKKLKDPTLRFRLLKHTRLNVVAFLNELPKTQHDVNSFVV
DISAQTSTLLCFSVNGVFKEVDGKSRDSLRAFTRTFVAVPASNSGLCIVNDELFVRNASA
DEIQRAFAMPAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQ
AFTHLKAKGEIPEVAFMK
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggggaaggcctacaacgagcatgatgaccgtgttagtttccctcaaaga
agaaagaaaggccggggtcctttccggtggaagtatggcgaggggaaccggaggtctgga
agaggaggttctggcattcggtcttcccgcctggaggaagatgacagagatgtggcaatg
agtgatgcccaggatgttccccgaatacgacacaacccctatcctccccgacccaaccgt
cgaggtgacagttggcatgatcgagatcgcattcatgttactgtgcggagagacagaatt
cttccagagagaggaggggctggcaccagccaggatgggacctcgaagaactggtttaag
attacaattccctatgggagaaaatatgacaagtcatggctcctgagtgtgattcagagc
aagtgcagtgtccctttcacccccattgagtttcactatgaaaacacacgggcccagttt
tttgtggaggatgccagtaccgcctctgcattgaaagctgtcaactataagattttggat
caggaaaaccgaaggatatctatcatcatcaactcctctgtcccaccccattctgtacag
aacgaactgaagccagaacaagtagagcaactaaagctgatcatgagcaaacgatacgat
ggttcccaacaagcacttgacctcaagggtctccgttcagacccagacttggtggcccag
aacatcgatgttgtcctgaatcgcaggagctgtatggcggctacgctgcgaatcattgag
gagaatatccctgagctcttgtccttgaacttgagcaacaataggctctacaggctggat
gacatgtccagccttgtgcagaaagcacccaacctgaagatcctcaacctctccggaaat
gagttgaaatctgagagggaactggacaaggtaaaagggctgaagctggaagagctgtgg
cttgacggaaacccgctgtgcgacaccttccgagatcagtccacctacatcagcgccatt
cgagaacgatttcccaaattattacgcctggatggccatgagttacccccgccaattgcc
tttgatgtcgaagcccccacgatgttaccgccctgcaagggaagctattttgggacagag
accctgaagaacctggtcctgcacttcctgcagcagtactatgcagtttacgactctgga
gaccggcagcggctactagatgcctaccacgatggggcctgctgctccctcagcattccc
ttcaccccccagaaccctgcccgaagcaatctggccgagtacttcaaggatagcaggaat
gtgaagaagctcaaagacccgaccctgcggttccggctgctgaagcacacacgtctcaac
gtggtggccttcctcaatgagttgcccaaaactcagcatgacgtcaattccttcgtggta
gacataagcgcccagaccagtacgttgctgtgtttttctgtcaacggggtcttcaaagaa
gtggatggaaagtctcgggattctttacgagccttcacccggacatttgtcgctgttcct
gccagcaattcaggactgtgcatcgtaaatgacgagctatttgtgcggaatgccagcgct
gatgagatccagagagccttcgccatgcctgcacctacaccttcctccagtccagtgccc
accctgtccccagagcagcaggaaatgctgcaggcattctctacccagtctggcatgaat
cttgaatggtcccagaagtgccttcaagacaacaactgggactacaccagatctgcccag
gcctttactcatctcaaggccaagggcgagatcccagaagtggcgtttatgaagtga
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