Canis lupus familiaris (dog): 484164
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Entry
484164 CDS
T01007
Symbol
RORB
Name
(RefSeq) nuclear receptor ROR-beta isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
484164 (RORB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfa03000
]
484164 (RORB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cfa03310
]
484164 (RORB)
Transcription factors [BR:
cfa03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
484164 (RORB)
Nuclear receptors [BR:
cfa03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
484164 (RORB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
484164
NCBI-ProteinID:
XP_013973030
Ensembl:
ENSCAFG00000001769
VGNC:
45696
UniProt:
A0A8C0PBT3
A0A8I3NN50
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Position
1:complement(83929462..84129651)
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AA seq
459 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQSGEAEALAR
VYGGGISNGLGGLHGEAGGTYANGHVIDLPKSEGYYNVDSGQPSPDQSGLDMTGIKQIKQ
EPIYDLTSVPNLFTYSSFNNGQLAPGITMGEIDRIAQNIIKSHLETCQYTMEELHQLAWQ
THTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCL
EVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIA
LFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIPTITAVC
NLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPDCATVCK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcacaaattgaagtgataccatgcaaaatttgtggcgataagtcctccgggatc
cactacggagtcatcacgtgtgaaggctgcaagggattctttaggaggagccagcaaaac
aatgcctcttactcctgcccaaggcagagaaactgtttaattgatagaaccaacagaaac
cgttgccaacactgccgactgcagaagtgtcttgccctaggaatgtcaagagatgctgtg
aagttcgggaggatgtccaagaagcagagggacagcctgtatgctgaggtgcagaagcac
cagcagcggctgcaggagcagcggcagcagcagagcggggaggccgaggcgctggccagg
gtgtacggcggcggcatcagcaacggcctcggcggcctccacggcgaggccggaggcacc
tatgccaacggacacgtcatcgacctgcccaagtccgagggttattacaacgtggattcc
ggccaaccgtcccctgatcagtcaggacttgacatgactggaatcaaacagataaagcaa
gaacctatctatgacctcacatccgtccccaacttgtttacctatagctctttcaacaac
gggcagctagcgcccgggataacgatgggtgagatcgatcgaattgcacagaacatcatt
aagtcccatctggagacatgtcagtacaccatggaggagctacaccagctggcatggcag
acacacacctatgaagaaattaaagcgtatcaaagcaagtccagggaagcactatggcag
caatgtgccatccagatcactcacgccatccagtatgtggtcgagttcgcaaagcggata
acgggcttcatggagctctgtcagaatgatcaaattctgcttctgaagtcaggttgcttg
gaagtggttttagtgagaatgtgccgtgccttcaacccattaaacaacactgttctgttt
gaaggaaaatatggaggaatgcagatgttcaaggccttaggttccgatgacctagtgaat
gaagcatttgactttgcaaagaatttgtgttccttgcagctgactgaggaggagattgct
ttgttctcatctgctgttctgatatctccagaccgagcctggctgatagaaccaaggaag
gtccagaagcttcaggaaaaaatctattttgcacttcaacatgtgattcagaagaatcac
ctggatgatgagaccttggcaaagttaatagccaagatccccaccatcacggcggtctgc
aacttgcatggggagaagctgcaggtattcaaacaatcacatccagacatagtgaataca
ctctttcctccattatacaaggaactctttaatcccgactgtgccaccgtctgcaaatga
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