Canis lupus familiaris (dog): 484359
Help
Entry
484359 CDS
T01007
Symbol
SHANK1
Name
(RefSeq) LOW QUALITY PROTEIN: SH3 and multiple ankyrin repeat domains protein 1 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
484359 (SHANK1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
Ank_5
SH3_2
SAM_2
PDZ_6
PDZ
SH3_1
SH3_9
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
484359
NCBI-ProteinID:
XP_038516893
VGNC:
53977
LinkDB
All DBs
Position
1:105658928..105703011
Genome browser
AA seq
2173 aa
AA seq
DB search
MTHSPASSEEEERHSASECPEGGSESDSSPDGPSRGPRGTRGQGSGAPGSLASTRGLQGR
SMSVPDDAHFSMMVFRIGIPDLHQTKCLRFNPDATIWTAKQQVLCALSESLQDVLNYGLF
QPATSGRDANFLEEERLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTGL
KKFLEYVQLGTSDKVARLLDKGLDPNYHDSDSGETPLTLAAQTEGSVEVIRTLCLGGAHI
DFRARDGMTALHKAACARHCLALTALLDLGGSPNYKDRRGLTPLFHTAMVGGDPRCCELL
LYNRAQLGIADENGWQEIHQACQRGHSQHLEHLLFYGAEPGAQNASGNTALHICALYNKE
TCARILLYRGANKDVKNHNGQTPFQVAVIAGNFELGELIRNHREQDVVPFQESPKYAARR
RGPPGAGLTVPPALLRANSDTSMALPDWMVFAAPGTSSSGAPGPTSGTQGQSQPSAPSTK
LSSGTLRSASSPRGARARSPSRGRHPEEAKRQPRGRPSSSGTPREGPAGGTGGSGGPGGS
LGSRGRRRKLYSAVPGRSFMAVKSYQAQAEGEISLSKGEKIKVLSIGEGGFWEGQVKGRI
GWFPSDCLEEVANRSQEGKQESRSDKAKRLFRHYTVGSYDSFDAPRSLMDGIGPGSDYII
KEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMG
DFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTRHPDMDEVHKKAPQQAKRLPPP
AISLRSKSMTSELEEMEYEQQPAPVPSMEKKRTVYQMALNKLDEILAAAQQTISASESPG
PGGLASLGKHRPKGFFATESSFDPHHRSQPSYERPSYLPPGPGLMLRQKSIGAAEDDRPY
LAPPAMKFSRSLSVPGSEDIPPPPTTSPPEPPYSTPPAPSSSGRLTPSPRGGPFNPSSGG
PLPSSSPASFDGPSPPDTRIGGREKSLYHSGPLPPAHHHPPHHHHHHAPPPQPHHHHAHP
PHPPEMETGGSPDDPPPRLALGPQPSLRGWRGGGPSPTPGAPSPSHHGSGAGGIGSSQAP
ALRYFQLPPRAASAAMYVPARSGRGRKGPLVKQTKVEGEPQKGGGLPPAPSPTSPASPQP
PPAAAAPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPTQPEAAGGGGGGGGGGGG
GGSSAPSPAPAMSPVPPSPSPVPTPTSPSGPATLDFTSQFGAALVGAARREGGWQNEARR
RSTLFLSTDAGDEDGGDSGLGPGAPPGPRLRHSKSIDEGMFSAEPYLRLESAGAGSGAGY
GAYGAGSRAYGGSGGSSAFTSFLPPRPLVHPLTGKALDPASPLGLALAARERALKESSEG
GGPPQPPPRPPSPRYEAPPPTPHHHSPHAHHEPVLRLWGASPPDPARRELGYRAGLGSQE
KSLPASPPAARRSLLHRLPPTAPGVGPLLLQLGPEPPPPHPGVSKAWRSGAPEEPERLPL
HVRFLENCQPRASGPGGRGPPSEDGPGVPPPSPRRSVPPSPTSPRGGEENGLPLLVLPPP
APSVDVEDGEFLFVEPLPPPLEFSNSFEKPESPLTPGPPHPLPDPPTPTTPLTPVPPPAV
AAAPPTLDSTASSLTSYDSEVATLTQGAPVAPGDPPPPGPPAPAAPAPPAPQPGPDPPPG
TDSGIEEVDSRSSSDHPLETISSASTLSSLSAEGGGSAGGGGGGGGSVASVASGPELLDT
YVAYLDGQAFGGSGTPGPPYHPQLMTPSKLRGRALGTSGGLRPGPSGGLRDPVTPTSPTV
SVTGAGTDGLLALSGCTGPSVASMAGGSVAIEPEGPAVPLPSASSLPRKLLPWEEGPGPP
PPPLPGPLAQPQASALATVKASIISELSSKLQQFGGSSAAGGALPWARGGSGGSGDSHHG
GASYVPERTSSLQRQRLSEDSQSSLLSKPVSSLFQNWPKPPLPPLPTGSGVPPSAAAAPG
ATSPSASSSTSTRHLQGVEFEMRPPLLRRAPSPSLLPASEHKVSPAPRPSSLPILPSGPL
YPGLFDIRGSPTGGAGGSADPFAPVFVPPHPGISGGLGGALSGASRSLSPTRLLSLPPDK
PFGAKPLGFWTKFDVADWLEWLGLAEHRAQFLDHEIDGSHLPALTKEDYVDLGVTRVGHR
MNIDRALKFFLER
NT seq
6522 nt
NT seq
+upstream
nt +downstream
nt
atgacccacagccccgcgtcaagcgaggaagaggaacgccacagtgccagcgagtgtccc
gaggggggctcagagtccgacagctccccagacgggcccagcagaggcccccgggggacc
cggggccagggcagcggggcacctggtagtctggcctccacccgaggcctccagggccgc
tccatgtctgtcccggacgacgcccacttcagcatgatggtcttcaggattggcatcccg
gacctgcaccagacaaaatgtctgcgcttcaaccccgatgccaccatctggacagccaag
cagcaggtgctctgcgccctgagcgagagcctgcaggatgtgctcaactatggtctgttc
cagccggccacctcaggccgtgatgccaacttcctggaggaggagcggctgcttcgggag
tacccccagtcttttgagaagggggtgccctacctggagtttcgatacaagacccgggtt
tacaaacagaccaacctggatgagaagcagctggcaaaattgcatacaaagacggggttg
aagaaattcctggagtatgtgcagctcgggacgtccgacaaagtggcacggctgctggac
aaggggctggaccccaattatcatgactcagattcaggagagacccccctgactctggct
gcccagactgaaggctccgtagaggtgattcgaaccctgtgcctaggaggggcccacatc
gacttccgggcccgggatggcatgacagcgctgcacaaagctgcatgtgcccgtcactgc
ctcgctctcacggcactcctcgaccttgggggctcccccaactacaaggaccgccgaggc
ctgacccctctgttccatacggctatggtggggggcgacccccgctgctgtgagctgctc
ctatacaacagggctcagctgggcatagctgatgagaacggctggcaggagattcaccag
gcctgccagcggggtcattctcagcatctagaacacctgctcttctacggggctgagccc
ggagcccagaatgcctcggggaacacagccttgcacatctgtgccctttacaacaaggag
acctgtgctaggatcctcctctatcgaggagccaacaaggatgtgaagaatcacaatgga
cagacccccttccaggtggcagtgatcgctgggaattttgaactgggagagctgatccga
aaccatcgagaacaggatgtggtgcccttccaggagtcccccaagtacgccgcccggcga
cggggacccccaggcgcggggctgacggtgcccccggcgctgcttcgggccaacagtgat
accagcatggccctgcctgactggatggtgtttgctgcccctgggacctcgtcctctggg
gcccctggccctacctcagggacccagggccagtcgcagccctcggcccccagcaccaag
ctcagcagtgggaccctccgaagtgccagcagcccccggggcgcccgggcccgttcccca
tcccgcgggaggcatcccgaagaggccaagagacagccccgtggacggcccagctccagc
gggacgcccagggaagggccggcagggggcacagggggctcagggggccccgggggctcc
ctgggcagccgcgggaggcgcaggaagctctactcagcggtacctggacgctccttcatg
gccgtgaagtcctaccaggcccaagcagagggagagatctccctgagcaagggggaaaag
atcaaagtgcttagcatcggggaaggaggcttctgggaaggccaggtcaaaggtcgcatt
ggctggttcccctctgactgcctggaagaggtggccaaccggtcccaggagggaaagcaa
gaaagccgcagtgacaaggcaaagagactcttccggcattataccgtgggctcctacgac
agctttgatgccccaagaagcttgatggatgggattggcccagggagcgattacatcatt
aaggagaagacagtcttgctgcagaagaaggacagtgaggggtttgggttcgtgctccgg
ggggccaaggcgcagacccccatcgaggagttcacccccactccagccttcccagcgctg
cagtatctggagtctgtggacgagggtggcgtagcatggcgagctggactgcggatggga
gacttcctcatcgaggtgaatgggcagaatgtggtgaaggttggccaccgacaggtggtg
aacatgatccgccaagggggcaacacgctgatggtcaaggtggtgatggtcaccaggcac
ccggacatggatgaggtccataagaaagcaccccagcaagctaagcggcttccaccccca
gccatctctctgcgttccaagtccatgacctcagagctggaagaaatggagtacgagcag
cagcctgcgccggtgcccagcatggagaaaaagcggaccgtgtatcagatggctctcaac
aaactggatgaaattttggcggcagctcaacagaccatcagtgcaagcgagagtcctgga
cctggtggcctcgcatcgctgggcaaacaccggcccaaaggcttctttgccaccgagtca
agcttcgatcctcaccaccgctcccagccaagttatgaacgtccttcttacctgcctccc
ggacctgggcttatgctccggcaaaaatctattggggctgctgaagatgatagaccctac
ctagcacccccagccatgaagttcagccgcagcctgtctgtgcctggctcggaggacatc
cccccgccgcccaccacgtccccaccggagcccccctacagcacacctcccgccccctcc
tcctctggccgcctcaccccatcccccagaggagggcccttcaaccccagttcgggtggc
cccctcccctcctcttcccctgcgtcctttgatggaccctcccctcccgacacgcgcata
gggggccgagagaagagcctgtaccacagcgggcccctgccccccgcccaccaccacccg
ccccaccaccaccaccaccatgccccgcccccccagcctcaccaccaccacgcccacccc
cctcatccccccgagatggagacgggaggctctcccgacgaccccccaccccgactggct
ctagggccccagcccagcctgcgcggctggcggggcggcgggcccagccccactccgggg
gccccgtccccgtcgcaccacggcagcggggccggcggcatcggctcctcccaggcccca
gccctgcgctacttccagctgcccccccgggcggccagcgcggccatgtacgtgccagcc
cgctcgggccgcgggcgcaaggggcccctggtcaagcagaccaaagtcgaaggcgagcct
cagaagggcggcggcctcccccccgccccctcgcccacgtccccggcgtccccgcagccg
ccgccggccgcggccgcgccctcggagaagaattccatccccatccccaccatcatcatc
aaggctccgtccaccagtagcagcggccgcagcagccagggcagcagcaccgaggcggag
ccccccacccagcccgaggctgcgggcggcggcggcggcggcgggggcggcggcggcggc
ggcggctcctcggcgcccagccccgccccggccatgtcgccggtgccgccgtccccctcg
ccggtgcccacccccacctcgcccagcggcccggccaccctcgacttcaccagccagttc
ggggcggccctggtgggggcggcccgcagggaagggggctggcagaacgaagcccgccgg
cgctccacgctcttcctctccaccgacgcgggcgacgaggacggcggcgacagcgggctg
ggcccaggggcgcccccgggcccccggctgcgccactcgaagtccatcgacgaaggcatg
ttctccgccgagccctacctccggctagagtctgcaggcgcggggagcggcgccggctac
ggggcttacggggccggcagccgcgcctacgggggcagcgggggcagcagcgccttcacc
agcttcctgccgccccgacccctggtccacccgctgacaggcaaggccctggaccccgcc
tccccgctcgggctggcgctggccgcccgagagcgggcgctgaaggagtcctcggagggt
ggtgggcccccgcagccccctccaaggcccccatcgccccgctacgaggccccgccgccc
accccccaccaccactcgccccacgcccaccatgagccagtgctgcgtctctggggggcc
tcaccacccgaccccgcccgccgggaactggggtaccgggcggggctgggcagccaggag
aagtcccttccggccagcccgccagctgcccgacgctccttgctgcaccgcttgcccccc
acggctcccggggtcgggcccctcctcctgcagctggggcccgagcccccgcccccgcac
cccggggtgagcaaggcgtggcggtcgggcgcccccgaggagccagagcggctgccccta
cacgtgcggttcctggagaactgccagcccagagccagcgggccgggggggaggggaccc
ccctcggaagacgggccgggggttccgccgcccagcccccgccgctccgtgccgccctcg
cccacctccccgcgaggcggtgaagagaatgggctccccctgctggtcctgccgccccct
gctccctctgtggatgtggaagatggcgagttcctctttgtggagcccttgcccccgcct
ctggagttctccaacagcttcgagaagcccgagtcgcccctcacgcccgggcctccccac
ccgctgcccgatccacccaccccaaccaccccattgacccccgtgccaccaccggctgtt
gctgccgcacctcccaccctggactccacggcatccagcctgacttcctacgacagcgag
gtggccacactaacccagggggcccccgtggctcctggggacccccctccaccaggcccg
ccagcgccggctgcccctgctcccccagccccccagcctggcccagacccgccgcctggc
acagattcgggtattgaggaggtggacagtaggagcagcagcgaccaccctctggagacc
atcagcagcgcgtccacactgagcagcctttctgccgaaggtggtggcagcgccggaggc
ggtggcggtggtggtggcagtgtggcaagtgtggccagcgggccagagcttctggacaca
tatgtggcctacctggatggccaggcgttcggggggagtggcactcctggcccaccgtat
cacccacagctcatgactccttctaagctccgtggccgggctctggggaccagtggaggc
ctgcgaccgggccccagtggaggactccgggaccctgtcactcccaccagccccaccgtc
tccgtgacaggggctggaacggatgggctgctggccctaagcggttgcacgggaccctcc
gtggccagcatggctgggggttcggtggctatagagccagaaggccccgcggtgcccttg
ccatcggcctcctctctgcctcggaagctgctgccctgggaggagggcccgggcccaccg
ccaccacccctgcccgggcccctggcccagcctcaggcctcagccttggccacagtaaaa
gccagcatcatcagtgaactcagctccaagcttcagcaatttgggggttcctcagcagct
ggtggcgctctgccctgggcccggggaggcagcgggggaagcggggacagccaccacggg
ggagccagctatgtccctgagaggacctcttcgctgcagcggcagagactctccgaagac
tcccagtcctctctcctctccaaacccgtcagcagcctgtttcagaactggcccaaacca
cctctgccgccactccccacaggaagcggggtccccccttcggccgctgcagctccagga
gccacctcaccctcagcctcctcctccacgtccacccgccacctccaaggcgtggagttc
gagatgcggccacctctgctccgccgggccccaagcccctcactgctgcccgcctcggag
cacaaggtcagccctgcacccaggccctcgtccctgcccatcctgccttccggacccctg
tatccgggcctctttgacatccgtggctccccaaccggaggggcaggaggctcagctgac
cctttcgcccctgtctttgtgccaccccaccccgggatatccggggggcttggtggagcc
ttgtcaggggcctcccgctccctttcaccgacccgcctgctttcgctgcccccggacaag
cccttcggcgctaaacctctggggttctggaccaagttcgatgtggctgattggcttgag
tggctgggcttggctgagcaccgagcacagttcctggaccacgagattgatggctcccac
ctgcccgccttgaccaaggaggattatgtcgatctgggtgtgacgagggtgggccaccgc
atgaacatcgaccgggctctcaaatttttcctggagaggtga
DBGET
integrated database retrieval system
