Canis lupus familiaris (dog): 484475
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Entry
484475 CDS
T01007
Symbol
CIC
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
484475 (CIC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfa03000
]
484475 (CIC)
Transcription factors [BR:
cfa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
484475 (CIC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Cic_C
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
484475
NCBI-ProteinID:
XP_022283836
Ensembl:
ENSCAFG00000004858
VGNC:
39270
LinkDB
All DBs
Position
1:complement(111507938..111534502)
Genome browser
AA seq
2527 aa
AA seq
DB search
MKPMKKACVGLPGSGSGGKSPPATRAKALRRRGAGEGDKPEEEDDEAQQQQQQPPPGPEE
AEEGEEEESERGPGAEGLPPELHPDDPAAPGPAEDPKVEGEASRWEPSLSRKTATFKSRA
PKKKYVEEHGAGSGSSGAAGAPEERARTPEEAGTLGVPPRPPTSTRSSSTDTASEHSADL
EDEPAEACGPGPWPPSGASGGYDLRQLRSQRVLARRGDGLFLPAVVRQVRRSQDLGVQFS
GDRALTFYEGAPGGGGGVDVVLDATPPPGALVVGTAVCTCVEPGVAAYREGVVVEVATKP
AAYKVRLSPGPNTQPGPPAALPQPPQLPHREPEEAVWVARSSLRLLRPPWEPEVPPRKPP
AGPEEEQAEPAGTLPPCPAALDPKQPEDAEVSKISFGGNLGTCEEGEEKHPPALGTPALL
PLPPPQLLSPPPKSPAFAGPGRPGEQPSPCQEGSQGGSRSSSVASLEKGAAPAARARTPL
TAAQQKYKKGDVVCTPNGIRKKFNGKQWRRLCSRDGCMKESQRRGYCSRHLSMRTKEMEG
LADSGPGGAGRPAGVAAREGSTEFDWGDETSRDSEASSVAARGDSRPRLVAPADLSRFEF
DECEAAVMLVSLGSSRSGTPSFSPVSTQSPFSPAPSPSPSPLFGFRPANFSPINASPVIQ
RTAVRSRHLSASTPKGGVLTPPDLGPHPPPPAPRERHSSGILPTFQTNLTFTVPISPGRR
KTELLPHPGALGAPGTGGGGATPDFPKSDSLDSGVDSVSHTPTPSTPAGFRAVSPAVPFS
RSRQPSPLLLLPPPAGLTSDPGPSVRRVPAVQRDSPVIVRNPDVPLPSKFPGEVSTAGEA
RAAGPGRGCRETPVPPGVASGKPGLPPPLPAPVPITVPPAAPTAVAQPMPTFGLASSPFQ
PVAFHPSPAALLPVLVPSSYTSHPAPKKEVIMGRPGTVWTNVEPRSVAVFPWHSLVPFLA
PSQPDPSVQPSEAQQPASHPVASNQSKEPAESAAVAHEQPPGGTGNADPGRPPGATCPES
PGPGPPHTLGVVEPGKGPPPATEEDAPGPPGEPRLDSETESDHDDAFLSIMSPEIQLPLP
PGKRRTQSLSALPKERDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQ
DNRTVSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAKPTS
LGLAGGHKETRERSMSETGTAAAPGVSSELLSVAAQTLLSSDTKAPGSGSCGAERLHTVG
GPGSARPRAFSHSGVHSLDGGEVDSQALQELTQMVSGPASYSGPKPSTQYGAPGPFSASG
EGGALAASGRPPLLPTRASRSQRAASEDMTSDEERMVICEEEGDDDVIADDGFGTTDIDL
KCKERVTDSESGDSSGEDPEGSKGFGRKVFSPVIRSSFTHCRPPLDPEPPGPPDPPPAFG
KGYGPTPSSSSSSSPASSSASAATSFPLGSGTFKAQESGQGSTAGPLRPPPPGAGGPVTP
SKATRFLPTDPAAFRRKRPESVGSLEPPGPSVIAAPPGGGGSVLQTLVLPSNKEDREGSG
SRMPSAPAPSLSYGAPAAPLSRPAATMVTNVVRPVSSTPVPIASKPFPTSGRAEASPNDT
AGARTEPVAGSRAPGSSPLGVSLVYSDKKSAAATSPAPHLVAGPLLGTVGKAPATVTNLL
VGTPGYGAPAPPAVQFIAQGAPGSGATTGSGAGAGSGPNGPVPLGILQPGALGKAGGITQ
VQYILPTLPQQLQVAPAPAPAPGTKTAAPGGPAPTTSIRFTLPPGTSTNGKVLAATAPTP
GIPILQSVPSAPPPKAQSVSPVQAPPPGGSAQLLPGKVLVPLAAPSMSVRGGGAGQPLPL
VSPPFSVPVQNGAQPPSKIIQLTPVPVSTPSGLVPPLSPATLSGPTSQPQKVLLPSSTRI
TYVQSAGGHALPLGTSPTSSQAGTVTSYGPTSSVALGFTSLGPSGPAFVQPLLSGQAPLL
APGQVGVSPVPSPQLPPTCTAPGGPVITAFYPGSPAPTSSAPLAQPSQAPPGLVYTVATS
TTPPAANILPKGPPAPATATPAPTSPFPNATAGSMTYSLVAPKAQRPTPKAPQKVKAAIA
SIPVGSFEAGAPGRSGPAARQPLEPGPAREPPTPESELEGQPATPAPPPPPETWAPTARS
SPPPPLPAEERTSSKGPETMASKFPGSSSDWRVPGLGLESRGEPPTPPSPAPAPAPAPGG
GGSSSSEGSSGRAAGDTPERKEAAGTGKKVKVRPPPLKKTFDSVDNRVLSEVDFEERFAE
LPEFRPEEVLPSPTLQSLATSPRAILGSYRKKRKNSTDLDSAPEDPTSPKRKMRRRSSCS
SEPNTPKSAKCEGDIFTFDRTGTEAEDVLGELEYEKVPYSSLRRTLDQRRALVMQLFQDH
GFFPSAQATAAFQARYADIFPSKVCLQLKIREVRQKIMQAATPTEQPPGADAPLPGPPPA
GTAAAPVPTPSPAGGPDPTSPGSDSGTAPAAPPLPPPPEPGPGQPGWEGPPQPSPPPPGP
STAATGR
NT seq
7584 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaatgaagaaggcatgtgtcggcctcccgggttctggcagtggcggcaagtcc
ccaccagccacccgggccaaggccctgagacggcgaggggctggggagggcgacaagcca
gaggaggaagacgacgaggcacagcagcagcagcagcagccacctccggggccagaagag
gctgaggagggtgaagaggaggagtccgagcggggccctggggcggaagggctgcccccc
gagctgcaccctgatgacccggcggccccaggcccagccgaggaccccaaggtagagggg
gaggcaagccgctgggagccctccctcagccgtaagacggccacattcaagtctcgagcg
cccaagaagaaatatgtggaggagcacggagctggcagtgggagcagtggggcggccggg
gcccccgaagaaagagcacggaccccggaggaggctggcaccctgggtgtacctccacgg
ccacccacctccacccgttcctcttccactgacacagccagcgagcactcggctgacctg
gaagatgagccagccgaagcttgcgggccaggcccctggcccccaagtggcgccagtggt
ggatatgacctgcgacagctgaggtcccaacgggtgctggctcggcgcggagatggcctc
ttcctaccggccgtggtgcgccaggtgcgcagaagccaggacctgggggtacagttctcc
ggggaccgggccctgactttctacgagggggcacccggcggcggcggcggtgtagatgtg
gttttggatgccacgccgccgccgggtgccctggtggtgggcaccgctgtctgtacctgt
gtggagcctggtgtggctgcctaccgtgagggtgtggtggtggaggtggccaccaagccg
gctgcctacaaggtccgcctcagccctggccccaacacccagccaggccccccagccgcc
ctgccacagcccccacagctgccgcaccgtgagcccgaggaggccgtgtgggtggcccgc
tccagcttgcgcctgctgcggcccccctgggaacccgaggttccaccgaggaagccccct
gcgggccctgaggaggagcaggctgagccagcgggtaccctacccccctgccctgctgct
ctggaccccaagcagcctgaggatgccgaggtgtctaagatcagcttcggtggcaacctg
gggacttgcgaggagggcgaggagaagcacccgccggccctgggcaccccggccctgctc
ccactgcccccgccccagctcctgtcaccgccaccgaagtccccggctttcgcaggccca
ggccgccctggcgagcagccctcaccctgccaagaggggagccagggcggcagccggagc
agcagcgtggcctctctggagaagggggctgcgccagccgcccgggcccgcaccccgctg
acagccgcccagcagaagtataagaagggtgacgtggtctgcacacccaacggaatccgc
aagaagttcaatggcaagcagtggcgacggctgtgctcccgagacggctgcatgaaggag
tcgcagcggcggggctactgctcacgccacctgtccatgcgaaccaaggagatggagggc
ctggcagacagtggccctggtggcgccgggcggccggcgggcgtggcggcgcgcgagggc
agcaccgagtttgactggggcgacgaaacatcgcgtgacagtgaggccagcagtgtggcg
gcccgtggggactcacgcccacgcctggtggctcccgctgacctgtcacgctttgagttc
gatgagtgtgaggcggccgtgatgttggtgtcgttgggcagctctcgctcgggcacgccc
tccttctcccccgtgtctacgcagtcgcccttctcacctgccccatcgccctccccgtcg
ccgctctttggcttccgccctgccaatttcagccccatcaatgcctcaccagtcatccaa
cgcactgctgttcgcagccgccacctgagcgccagcaccccaaagggaggcgtgctgacg
ccaccagacctgggcccccacccaccgccacccgcccccagagagcgccattcttctggc
atcctacctaccttccagaccaacctgaccttcaccgtgcccatcagccctgggcggagg
aagacagagctgctgccccacccaggggctctgggggccccgggcacagggggcggagga
gccaccccggacttccccaagagcgacagcctagactctggcgtggactcggtgtcccac
acgccgacgccctccacgccggctggcttccgggcggtgtcacctgctgtgcccttctct
cgctcccgccagccctcgccgttgctgctgttgcccccacctgctggcctgacctcggac
cctgggccctctgtgcgcagggttcctgctgtgcagcgggactcgccggttattgttcgc
aaccccgatgtgccgctgccctccaaattccctggggaggtgagcactgccggcgaggcg
cgggcagcgggacctgggcggggctgcagagagaccccagtgccccccggggtggccagt
gggaagcctggcctgcccccacctctgccagcccccgtgcccatcaccgtgcctccagcc
gcgccgactgccgtggcccagccgatgcctacctttggcctggcttcttcacccttccag
ccggtggccttccacccctcacctgctgccctattgcccgtcctggtgcccagcagctac
accagccatcctgcccctaaaaaggaagtcatcatgggccgacctgggacagtgtggacg
aatgtggaacctcgctctgttgctgtgttcccctggcactccttagtaccctttctggcc
cccagccagcccgacccctctgtgcagccaagtgaggcccagcaacctgccagccaccca
gtggcctccaaccagagcaaagaacctgctgagtcggcagctgttgctcatgagcagccc
ccaggtgggacagggaatgctgatcctgggcggccccctggagccacatgccctgagagt
ccagggcctggacccccccacactttgggggtggtggaacctggaaagggtccccctccc
gccactgaggaggatgcccctggccctccaggagagccccggctggacagtgagacagag
agtgaccacgatgatgccttcctctccatcatgtctcctgagatccagttgcccctgcca
cccgggaaacgccggacccagtctctcagtgccctgccaaaggaacgagactcctcttca
gagaaggatggacgcagccccaacaagcgggagaaggaccatatccggcggcccatgaat
gccttcatgatcttcagcaagcggcaccgagccctggtccaccagcgtcaccccaaccag
gacaaccggaccgtcagcaagatcctgggcgagtggtggtacgccctggggcccaaggaa
aagcagaagtaccatgacctggccttccaggtgaaggaggcccactttaaagctcaccca
gactggaagtggtgcaacaaggacaggaagaaatccagctcagaggccaagcccacgagc
ctggggctggcaggagggcacaaggagactagggagcggagcatgtcagagacgggaact
gccgccgcccctggagtgtcctcggagctcctgtctgttgcagcccagacactcttgagt
tcggataccaaggctccggggagtggctcctgtggggcagagcgtctgcatacagtgggc
ggacctggctcagcccggcctcgggccttctcccacagcggggtccacagcctggatggt
ggcgaagtagatagccaggcactacaggagctgactcagatggtgtctggccctgcgtcc
tattccggtccaaagccttccacccaatatggggctccaggccccttctcagcctccggt
gagggaggtgccctggcggccagtgggcgacccccactgctgcccacccgggcctcccgt
tcccagcgtgcagccagtgaggacatgaccagtgacgaggaacgcatggtcatctgtgag
gaggagggagacgatgatgtcattgctgacgacggctttggcaccactgacattgacctc
aagtgcaaggagcgggtgactgacagtgagagcggagacagctctggggaggacccagag
ggcagcaagggcttcggccggaaggtgttctcgcctgtgattcgttcctcctttacccac
tgccgcccaccgctggaccctgagcccccagggcccccggacccacctccagcctttggc
aaaggctacgggcccaccccgtcctcttcctcctcgtcctcacctgcctcctcctcagcc
tcagcagccacctccttcccattgggctcagggaccttcaaggcccaggagtcaggccag
ggcagcacagcaggcccactacggcccccaccccctggggctgggggcccagtgacacct
tccaaggccacccggttccttccaacggatcctgcggctttccgacgcaagagacctgaa
agcgtgggaagcctggagccgccaggcccctcggtcattgcagcccctcctggtggggga
ggaagtgtcctacagacgctggtcctgccctcaaacaaggaggaccgggaaggcagcgga
agccgcatgccctcggccccggctccctcactgtcctatggggccccagcagcccccctg
tcccgcccagctgctaccatggtcaccaacgtggtacggcctgtcagtagcactcctgtg
cccattgcctctaagcccttccccacctctggccgggctgaggcatctccaaatgacaca
gcaggtgccaggactgagccggtcgcagggtcccgggctcctgggagctccccactgggt
gtaagcttagtatattcggacaagaagtcagcagcagccacctcgccagccccgcatctg
gtggctgggcccctactgggcaccgtggggaaggcccctgccacggtcaccaacctgctg
gtgggcacgcccggttatggggccccagcaccccctgctgttcagttcatagcccagggg
gcccctggcagtggggccactacaggctcaggagcaggtgcagggagtggccccaatggg
cctgtgcccctgggcatcctgcagccaggtgccttgggcaaagctgggggaatcacccag
gtgcagtacatcctgcccacgctgccccagcagcttcaggtggcacccgccccggcacca
gcccctgggaccaagacagcagctcccggcggccccgcacccaccaccagcatccggttc
actctcccaccgggcacctccaccaatggcaaagttctggcggccaccgcacccactcct
ggcatccccatcctgcagtctgtaccctccgctccgcccccaaaagcccagtccgtttct
cctgtgcaggccccgcccccgggtggctcagcccagctgctacccgggaaggtgctggtg
cccctggcagcccctagcatgtcagtgcggggtggaggggctggccagccgctgcccctg
gtgagcccacctttttcagtacctgtgcagaatggtgcccagccacccagcaagatcatc
cagctgactccggtgcctgtgagcacacccagcggcctggtgccgcccctcagcccagcc
acactctctggacccacctcgcagcctcagaaggtcctgctgccctcttccaccagaatc
acctacgtgcagtcggcgggtgggcacgcgttgcccctgggcaccagccctacgtccagc
caggctggaacagtcacctcgtatgggcccacgagctcggtagccctaggcttcacctcg
ctggggcccagcggacctgcctttgtgcagcccctgctttcaggccaagccccgctgctg
gctcctggccaggtgggcgtgtcgcccgtgcccagcccccagctgccgcccacctgcaca
gcccccggaggtcccgtcatcacagcgttttaccctggcagccctgcacccacctcctca
gcacccctggcccagccatcccaggctcccccgggcctggtctacactgtggccactagc
accaccccacctgctgccaacatcctgcccaagggcccaccggcccctgccactgccacc
ccggcccctaccagccctttccctaatgccacagcaggctccatgacctacagcttagtg
gcccccaaggcccagcggcccacccctaaggccccccagaaagtgaaggcagccatcgcc
agcattcccgtgggttcctttgaggcaggtgcccctgggcggtcaggccctgcagcccgg
cagcccttggagcctggcccagcccgtgagccccctacccctgagtctgagcttgagggg
caacctgcaacaccagcccctccaccgcccccagagacctgggctcccacagcccggagt
agccccccaccgcccctgcctgctgaggagcggactagcagcaagggccctgagaccatg
gccagcaaattccccggctcatcttcagactggcgagtccctgggctgggtctggagagc
cgtggggagcctcccacccctcccagcccagcaccagctccggccccagcccctggcggt
ggcggcagcagcagtagcgagggcagcagtgggagggcagccggggacacccccgagcgc
aaggaggccgctggtaccggcaagaaggtgaaggtgcggcccccgcccctgaagaagacc
tttgactctgtggacaacagggtcctgtcggaggtggacttcgaggagcgctttgctgag
ctgcctgagttccggcctgaggaggtgctgccttcgccaaccctgcagtctctggccacc
tcgccccgggccatcctgggctcctaccgcaagaagaggaagaactccactgacctggac
tcagcccctgaggaccccacctcgcccaagcgcaagatgaggagacgctccagttgcagc
tccgagcccaacacccctaagagtgccaagtgtgagggggacatcttcacctttgaccgt
acaggtacggaagccgaggatgtgcttggggagctggaatatgagaaggtgccatactct
tcactgcggcgcaccctggaccagcgccgggccctggtcatgcagctcttccaggaccat
ggcttcttcccatcagcccaggccacggcagccttccaggcccgctacgcagacatcttc
ccctcaaaggtctgcctgcagttgaagatccgggaggtgcgccagaagatcatgcaggcc
gccacgcccacggagcagccccctggagctgacgcccccctccccggaccgccccctgct
ggcactgctgctgcccctgtccccactcccagccctgctgggggccccgaccccacctca
cctggctcggactctggcacagctccggctgccccgccactgcctccacctccagaaccg
ggtcccggacagcctggctgggagggccccccccagccatcccccccaccccccggcccc
tccacagctgccacaggcaggtga
DBGET
integrated database retrieval system
