Canis lupus familiaris (dog): 485404
Help
Entry
485404 CDS
T01007
Symbol
HPS5
Name
(RefSeq) Hermansky-Pudlak syndrome 5 protein isoform X1
KO
K20191
Hermansky-Pudlak syndrome 5 protein
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfa04131
]
485404 (HPS5)
Membrane trafficking [BR:
cfa04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
485404 (HPS5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_HPS5
Beta-prop_HPS5
WD40_WDHD1_1st
PEP5_VPS11_N
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_RSE1_2nd
Beta-prop_THOC3
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_1st
ANAPC4_WD40
Beta-prop_Vps41
ribosomal_L24
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
485404
NCBI-ProteinID:
XP_005633788
Ensembl:
ENSCAFG00000009161
VGNC:
41777
UniProt:
A0A8C0TJ35
LinkDB
All DBs
Position
21:complement(40205174..40250174)
Genome browser
AA seq
1133 aa
AA seq
DB search
MTFVPVIPESYSHVLAEFESLDPLLSTLRLDSSRLKCTSIAVSRKWLALGSSGGGLNLIQ
KEGWKHRLFLSHREGAISQVACCLHDEDYVAVATSQGLVVVWELNQERRGKPERIYVSSE
HKGRKVTALCWDTAILRVFVGDHMGKVSAIRLNTSKQTKATAAFVMFPVQTITIVDSCVV
QLDYLDGRLLISSLTRSFLCDTEREKFWRIGSKERYGEYGACFFPGRCSAGQQPLIYCAR
PGSRMWEVNFDGEVISTHQFKKLLSSPPLPVITLRSDPQYDHTVGSSQSLSFPRLLYVSE
HCVLTWTEGGIYIFIPQNVQVLLWSEVKDIQDVAVYKNELFCLHLNGKVSHLSLLSVERC
VERLLRRGLWNLAARTCCLFQNSIIASRGRKSLTADKLENLKSQLQSQLDLTTYSDLISQ
LEELILKFEPLDSACSSRRSSISSHESFSILDSGIYRIISSRRGSQSDEDSCSLHSQTLS
EDERLKEFASHPEEDQPDPCWSSRGNEDSVSHAPVTFETDKNETFLPFGIPLSFRSPSPL
VSLQAVKESVSSFVRKTTEKIGTLHTSPDLKIRPEPRGDEHLCEEDMSPVICPKEEDTED
KKEVISQPPEEDKFQELKVATAEAMTKLQDPLVLFEPESLRMVLQEWLPQLEKAFAVKDF
LGVSDIGHSSTMSNQDVLLFEESKKGILDEDNKNEKRDSLGNEEIVAPTACESTECVKEP
SDDLFQVCAPCSIADGLQKDLAELTTLCLELNVLNFETKTTSGHADHSFQQHSPEILACQ
FIKKYFFLLDLKRAKESVKLSYANSPGVWDTFIEGLKELASSNPTYIEMEQGDLPTRLKL
LNDSVPFDNPLLIAYAARLYERFGESALRSLIGFYPSVLPSDVTQLCHHHPAQFLAYLDS
LVKSRPEEQRPSFLESLLQPESLRLDWLLLAVSHDAPPSTSTMDDEGNPRPHSHLSSWGY
SQLMLHLIKLPADFTTKEKMTDICRSHGFWPGYLSLCLELERRREAFTNIVCLNDMSLME
GDNGWVPETVEEWKLLLHLVQNKNTKPAPQKSPNGNFSDGPSPINVENVALLLAKAMGPD
QAWSLLQECGLTLELSERFTRTCDILRIAEKRQRALIQSMLEKCDRFLWSQQA
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgacttttgtgccagtgataccagagtcctacagccatgttcttgcagagtttgagtct
ctggatccattactttcaaccctgaggctggactccagtcgtctgaagtgcaccagcata
gctgtatctcgaaaatggttggctttgggcagttcaggaggaggactcaatctcattcag
aaggaaggatggaagcacaggctttttctttcacatagggaaggtgcaatttctcaggtt
gcatgttgtttacatgacgaggattatgttgctgtagctaccagtcaaggtcttgtagtt
gtttgggaattaaatcaggagcgtcgtgggaaaccagaacgaatttatgtgtcttcagag
cataaaggccgaaaagttacagctctctgttgggatacagctattcttagagtttttgtg
ggtgatcatatggggaaagtttctgccatcagacttaatacttctaaacaaacaaaggca
actgctgcctttgtgatgtttcctgttcagacaataaccatagttgactcctgtgttgtg
cagttggattatttggatggaagactacttatatcttcacttactcgatcattcttgtgt
gacactgagagagaaaaattctggagaattggaagcaaggaaagatacggagaatatgga
gcttgtttcttccctggaagatgttctgcaggccagcaacccctaatatattgtgctcgc
cctggctccaggatgtgggaagtgaactttgatggggaagttataagtacacatcagttt
aagaaactcctctcatcaccacctctccctgtgattactctaagatcagaccctcagtat
gaccatacagttggatcctcccagtctttgtctttccccagactcttgtacgttagtgag
cattgtgtgctgacttggacagaaggaggaatttatattttcattcctcagaatgttcaa
gttcttctctggagtgaggtcaaagatattcaggatgtggccgtctacaagaacgagctg
ttctgtttgcacctaaacgggaaagtctcacatctttctctattgtctgtggaacgctgt
gtggagcgcctgctgaggagaggcctgtggaacctggctgctcgcacttgctgtcttttc
caaaattctattattgccagcagaggaagaaaatctttgactgcagataaattggagaat
ctgaagtctcaacttcagtctcaactggacctcacaacctatagtgatctaatttctcaa
ctggaagaattgattttaaaatttgaacctttggattcagcttgcagcagtcggagaagc
tccatttcatcacacgaaagtttcagcatcttggactctggtatatatcgtatcattagt
agtaggagaggcagtcagtcggatgaggactcttgttcccttcacagccaaactctctca
gaagacgagagactcaaagaatttgcctcacatccagaagaggaccagccagatccgtgc
tggagctcacgcggaaatgaagacagtgtttctcatgctcccgtgacatttgagacagat
aagaatgaaacatttctccccttcggcattccactatcatttcgttctccatctcctctt
gtgtctcttcaggctgtcaaggaaagtgtttctagctttgtacgtaaaactactgagaag
attggcacccttcatactagccctgatctgaaaataagaccagaacccaggggtgatgag
catttatgtgaagaggatatgagtccagtcatctgcccaaaggaagaagacactgaggac
aaaaaagaagtaattagtcaacctccagaagaagacaagttccaagagctcaaagtagcg
acagcagaagcaatgaccaagctacaagatccactggttttgtttgaacccgagtctctg
agaatggtcttacaggagtggcttccacagttagaaaaagcatttgccgtgaaggacttt
ttaggcgtttcagatattggccactcatctacgatgtcaaaccaggatgtgctgttgttt
gaagagtcaaaaaagggaatattagatgaagataacaaaaatgaaaaaagagactcttta
ggcaatgaagaaattgttgctccaacagcatgtgaatctacagagtgtgtgaaggagccc
tcggatgaccttttccaagtatgtgctccgtgcagcatagctgacggtcttcagaaggac
ctggctgaattgacaacgttgtgtttggaattgaatgtattgaattttgagaccaaaacc
acaagcggacacgcggaccattctttccaacagcactctcctgaaattctggcttgtcag
ttcataaagaagtacttcttcctcctggacttgaaaagagcaaaggagagtgtcaagctt
agttacgctaacagtcctggtgtttgggacacttttattgaaggattgaaagaattggca
agttccaatcctacatatatagagatggaacaaggagacctcccaacaagactaaagtta
ttgaatgactcagtcccctttgacaatcctttgttgattgcttatgctgcccgattgtat
gagaggtttggagaatctgcccttcggtccttaatcggattttacccatctgttttgcct
tcggatgtcacgcaactttgtcatcatcatcctgctcagtttttggcctatttagacagt
ctggtgaaatcgaggcctgaagaacaacggccctcctttcttgagtctcttctgcaacca
gagtctttaaggttggattggctgcttttggccgtgtcccacgatgctcccccaagcacc
agcacaatggacgatgaaggaaaccccaggcctcattcacacttgtcttcatggggctac
agtcagctgatgcttcatctcattaaactacctgcagattttacaaccaaagagaaaatg
actgacatctgtaggtctcatggtttctggcctggatatcttagtctttgtttggagtta
gagagaagaagagaggcctttaccaacattgtgtgcttgaacgatatgagcctgatggaa
ggggacaatggttgggtcccagagactgtggaggaatggaagctgctcctgcatcttgta
cagaacaagaacacgaagcccgcaccccagaagtcaccaaatgggaacttcagtgatggg
ccttcccccatcaacgtggagaatgtggccctcctattagctaaggccatgggcccagat
caggcctggtcactgctgcaggaatgtggtttgaccctggagttgtcagagaggtttacc
agaacctgtgatattctaaggattgctgagaagagacagagagccttgatacaaagcatg
ctggaaaaatgtgatcggtttctctggtctcagcaggcctag
DBGET
integrated database retrieval system
