Canis lupus familiaris (dog): 485593
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Entry
485593 CDS
T01007
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha isoform X5
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cfa04040
]
485593 (SCN11A)
Ion channels [BR:
cfa04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
485593 (SCN11A)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
485593
NCBI-ProteinID:
XP_013962271
Ensembl:
ENSCAFG00000029139
VGNC:
45914
LinkDB
All DBs
Position
23:complement(8599916..8691489)
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AA seq
1775 aa
AA seq
DB search
MTMDDRCYPVIFPDERNFRPFTSDTLATIEKRIAIQKEKKRCKDKTTAEPQPRPQLDLKV
SRKLPKLYGDIPHELIARPLEDLDPFYRNHKTFMVLNKKRTIYRFSAKRALFILGPFNPI
RSLAIKISVHSLFSMFIICTVIINCVFMATAHGKDKNNTDTDNAEYVFTGIYIFEALIKI
LARGFILDEFSFLRDPWNWLDSIVIVTAFVSYSPNTILNNSISMSSLRTFRVFRALKAIS
VVSGLKVIVGALLRSVKKLVDVMILTLFCLSIFALVGQQLFMGSLNQRCIKASCTDINKL
SDSCFEKKNSSEFRMCGIWMGESACSEGFQCNHTKRNPDYNYTNFDNFGWSFLAMFRLMT
QDSWEKLYQQTLRASGLFSVFFFVVVIFLGSFYLINLTLAVVTMAYEEQNRNVAAETEAK
EKMFQEAQRLLKEEKEALVAMGIDRSSLNSLEASSFSSKKRKLFGNRKRKSFFLRDSGKD
QTPGSDSDEDSTKKPHILEQTKRLSQNLSVDYCDDHGDPFQRQRALSAVSILTITMQEQE
KSQEPCLPCGENLASRYLVWNCSPRWLCIKKALRTVMTDPFTELAITVCIIINTVFLAME
HYKMDQSFESILYTGNLVFTGIFMAEMCLKIIALDPYNYFRRGWNIFDSIVALLSFVDVM
INIIVGKQCPRVFHSLRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLAIVVFIFS
VVGMQLFGSQFNSVKSNRRSCNPTVPCLRRWHMGDFYHSFLVVFRILCGEWIENMWECMQ
ETNQTLCIVVFLLIMVIGKLVVLNLFIALLLNSFSNEERDGNLDGESKKTKVQLALDRFH
RVFCIVIYTLEHFCHKWCRTQNSPKRTKVTGGPAAQSKDIIPLVTEMKRGPETREEHDQT
WLAPLAEEEDGFESSGENNAQHITQPEAGKQCQAFEFHQETKKSTSPGAQSVEIDVFSED
DICLSKQDPQKKSDTASVFSECSTIDPQDPFGRVTEMVLKKEPERCFPKGLGHCFPCCSM
NKRKSPWIIWWNLRKTCYQIVKHSWFESFIIFVILLSSGALVFEDIYLEERPNIRDLLNC
TDHIFTYIFILEMGLKWVAFGFGKYFTSVWCWLDFIIVIVSVTSLIDLKSLKSFRTLRAL
RPLRALSQFQGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVNFFSGKFGRCINRTD
INSVINYSTIANQSQCEGGNLSWVNLPVNFDNVGMAYLALLQVATFKGWMDIMYAAVDSR
GKEQQPGFEESPYNYLFFVAFIIFGSFFTLNLFIGVIIDNFNQQQKKLGGEDIFMTEEQK
KYYNAMKKLGSKKPQKPIPRPLNKCQGLMYDLVTNQVFDVIIIILIFLNMLSMMAESENQ
LDTTKFILDRLNLAFVVIFTIECLIKIFALRQYYFTIGWNLFDCVIVVLSIVSTMVSALE
NQEHIPFPPTLFRIVRLARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLVMFI
YAIFGMNCFCKVNEEFGIDDIFNFKTFVGSILCLFQITTSAGWDALLRPMLQSKDSCNPN
LDSRHLPAIAITYFVSYIIISFLIVVNMYIAVILENFNTATEESEDPLGEDDFEIFYEVW
EKFDPEATQFIKYSALSDFADALPEPLRVAKPNKFQFLMMDLPMVSGDRLHCLDILFAFT
TRVLGDSSGLDNMKVMMEEKFMEANPSKKLYEPIVTTTKRKEEERCAAIIQKAFRKYKVK
MSTYALEDRPGSPLHTLCNGDLSGSGVAEGKVHYD
NT seq
5328 nt
NT seq
+upstream
nt +downstream
nt
atgacaatggatgacagatgctacccagtgatctttccagatgaacggaatttccgtccc
ttcacttctgatactctggctacaattgagaagaggattgccatccaaaaggagaaaaag
aggtgcaaagacaagacaacagcagaaccccagcctcggcctcagcttgacctaaaggtc
tccaggaagttgcccaagctctatggtgatattccccatgagctgatagcaaggcccctg
gaagacttggacccattctacagaaatcataagacatttatggtgttgaataaaaagaga
acaatctaccgcttcagtgccaagcgtgccttgttcattcttgggcctttcaatccaatc
cgaagtttagccatcaaaatctcagtccattcattgttcagcatgttcatcatctgcacc
gtcatcatcaactgcgtgttcatggccaccgctcatgggaaggacaaaaataatacagat
accgacaatgctgagtatgtcttcactggtatttatatttttgaagctttaataaaaata
ttggcaagaggttttattctggatgagttttcttttcttcgagatccatggaactggctg
gactccattgtcattgtaacagcgtttgtatcatattcaccaaataccatactcaacaac
agcatcagtatgtcatccctgcgtaccttccgagtgtttagagctttgaaagcaatttca
gtggtttcaggtctaaaagtcattgttggggccttgctacgctctgtgaagaagcttgtc
gacgtgatgatcctgactctcttttgcctcagcatcttcgccctggtaggtcagcagctc
ttcatgggaagtctgaaccaaagatgtatcaaggcgagctgtacggatatcaataaactt
agtgatagttgctttgaaaagaaaaattcctctgaattcagaatgtgtggcatctggatg
ggtgaaagtgcctgttctgaaggatttcaatgcaaccacaccaaaaggaatcctgactat
aattataccaattttgacaactttggttggtcttttcttgccatgtttcggcttatgacc
caagattcctgggagaagctttatcaacagaccttgcgtgcctcagggctcttctcagtt
ttcttctttgtggtagtcatcttcctgggctctttttacctgattaacttaaccctggct
gttgtcaccatggcttatgaggaacagaacagaaacgtagctgctgaaacagaggccaag
gaaaagatgtttcaggaagcccagcggctgctgaaggaggagaaggaggctctagttgcc
atgggaattgacagaagttcacttaattccctggaagcatcatctttttcctcaaagaag
agaaagctatttggtaataggaaaagaaagtccttttttttgagagactctgggaaagac
cagactccaggatcagattctgatgaagattccacaaaaaagcctcacatcctggagcaa
accaaacgactctcccagaatctgtcagtggattattgtgatgatcacggggaccccttc
caaaggcagagggccctgagtgctgtcagcatcctcaccattaccatgcaggaacaagaa
aaatcacaggagccttgcctcccatgtggggaaaacctggcatccagatacctcgtgtgg
aactgtagtccacgttggctgtgcattaagaaggccctgagaactgtgatgactgacccc
tttactgagctggccatcaccgtctgcatcatcatcaacactgtcttcttggccatggag
cattacaaaatggaccagagttttgagtctatattgtacacagggaatttggttttcact
ggcattttcatggcagaaatgtgcctaaaaattattgcacttgatccctacaactacttt
cgccgaggctggaacatttttgacagcatcgttgctcttctgagttttgtagatgtgatg
atcaatataattgtaggaaaacaatgtccgagggttttccattccttgagagtgctgagg
gtcttcaagttagcgaaatcctggccaactttaaacacactgattaagataattggccac
tccgttggagctctgggaaacctgactgtggtcctggctattgtggtctttattttctca
gtggttggcatgcagctttttggctctcaattcaattctgtaaagagtaatagaagatcc
tgcaaccctacagtcccatgtttacgacgctggcacatgggggacttttaccattccttt
ctggtggtattccgcatcctctgtggggaatggattgaaaacatgtgggaatgtatgcaa
gaaacaaatcaaacactgtgcattgtcgtctttctgttgatcatggtgatagggaaactc
gtggtactcaacctcttcattgccttgctgctcaattccttcagtaatgaagagagagat
ggaaacttggatggagagtccaaaaaaaccaaagtccagttagccctggatcggttccac
cgggttttttgcattgttatatatactcttgagcatttttgtcacaagtggtgcaggact
caaaactcaccaaagagaacaaaggtgacaggaggccctgctgcccaaagcaaagatatc
attccgttggtcacagagatgaaaaggggccccgagactagggaggagcatgatcagacg
tggttggccccacttgcagaggaagaggatggttttgaatcttctggagaaaacaatgca
cagcatatcacacaacctgaggctggaaaacagtgtcaggcctttgaattccatcaggag
accaagaagtccaccagcccaggagctcaaagtgtggaaattgacgtgttctctgaggat
gacatatgtttgtcaaaacaagatccccaaaagaagtctgatactgccagtgtgttctca
gaatgtagcaccattgatccacaggatccctttgggcgggtaactgaaatggttctcaaa
aaagaaccagagcgatgttttcccaaaggcctgggtcactgcttcccatgctgttccatg
aacaagagaaagtccccctggatcatttggtggaacctgcggaaaacctgctaccaaata
gtgaaacacagctggtttgagagctttattatctttgtgattctgctgagcagtggggca
ctggtatttgaagatatttaccttgaggaacgacccaatatccgagatttacttaattgt
actgaccatattttcacatacatttttatcctggagatgggtctaaaatgggtggccttt
ggatttgggaagtatttcaccagtgtctggtgctggctcgatttcatcattgtgattgtc
tctgtgaccagtctcattgacttaaagagcttgaagtcctttcggaccctacgagcactg
aggcccttgcgagcattgtcccagttccaaggaatgaaggtggtagtcaatgctctcata
ggtgccatacctgccattctgaatgttttgcttgtctgcctcattttctggctgatattt
tgtatcctgggagtaaacttcttttctggaaaatttggaagatgcattaatagaacagat
ataaactcagttataaattacagcactattgcgaatcaaagtcaatgtgaaggtggaaat
ttatcttgggtcaaccttccagtcaactttgacaatgtgggaatggcttaccttgccctg
ctgcaagtggcaacatttaagggctggatggatattatgtatgcagctgtcgattccaga
gggaaagaacaacagccagggtttgaggaaagcccatacaactaccttttcttcgtggct
tttatcatctttggttcattctttactctgaatctctttattggtgttataattgacaac
ttcaaccaacagcagaaaaagttaggtggtgaagacatttttatgactgaagaacagaag
aaatactataatgcaatgaaaaaattaggatccaaaaaacctcaaaagcccattccaagg
cctctgaataaatgccagggtctcatgtatgacctagtcacaaaccaagtctttgacgtc
attatcatcatcctcattttcctcaacatgcttagcatgatggctgaatcagaaaaccag
cttgataccacaaaattcatccttgatcgtctcaacctggcctttgtggtcatctttaca
attgagtgtctcatcaaaatctttgctttgaggcaatactacttcaccattggctggaat
ttatttgattgtgtgatcgtggttctttctattgttagtacaatggtttctgccttggag
aaccaggagcatattcctttccctccaacactcttcaggattgtccggttggctcgcatt
ggtcgaatcctgagacttgttcgggcagcacgaggaataaggactctcctttttgctctg
atgatgtcccttccctctctattcaacatcggtcttctactttttctggttatgtttatt
tatgccatttttggtatgaactgcttttgcaaagtgaatgaggagtttggaattgatgac
atattcaacttcaaaacttttgttggcagcatactctgtctcttccagatcaccacctca
gcaggctgggatgccctccttaggcccatgctgcaatcaaaggattcatgcaaccccaat
ttagacagccgccacctccctgccatagccatcacctacttcgtcagttacatcatcatc
tcctttctcattgttgtcaacatgtacattgctgtgattttagagaacttcaacacagcc
acagaagaaagtgaggaccctttgggtgaagatgactttgagatattctatgaagtctgg
gaaaagtttgacccagaagcaacacagttcatcaaatattctgccctttctgactttgct
gatgcccttcctgaacctttgcgtgtggcaaagccaaataaatttcaatttctcatgatg
gacttgcccatggtgagtggagatcgtcttcactgtttggatattctcttcgcattcacc
actagggtactcggtgactccagtggcctggacaacatgaaggtcatgatggaggagaag
ttcatggaagccaacccttccaagaagttatatgaacccatagtcaccaccaccaagagg
aaggaagaggaaaggtgtgctgctattattcaaaaggcctttcgaaaatataaggtgaag
atgtccacgtatgccttggaagataggcctggttcaccactccacacactctgcaatgga
gacctttctggctctggggtggccgagggcaaggtccactacgactga
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integrated database retrieval system
