Canis lupus familiaris (dog): 485659
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Entry
485659 CDS
T01007
Symbol
COL6A5
Name
(RefSeq) collagen alpha-5(VI) chain isoform X2
KO
K06238
collagen type VI alpha
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04151
PI3K-Akt signaling pathway
cfa04510
Focal adhesion
cfa04512
ECM-receptor interaction
cfa04820
Cytoskeleton in muscle cells
cfa04974
Protein digestion and absorption
cfa05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
485659 (COL6A5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
485659 (COL6A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
485659 (COL6A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
485659 (COL6A5)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
485659 (COL6A5)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
485659 (COL6A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cfa04147
]
485659 (COL6A5)
00536 Glycosaminoglycan binding proteins [BR:
cfa00536
]
485659 (COL6A5)
Exosome [BR:
cfa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
485659 (COL6A5)
Glycosaminoglycan binding proteins [BR:
cfa00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
485659 (COL6A5)
Hyaluronan
Extracellular matrix or blood plasma proteins
485659 (COL6A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
VWA_CoxE
Copine
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
485659
NCBI-ProteinID:
XP_005634462
Ensembl:
ENSCAFG00000006046
VGNC:
39482
LinkDB
All DBs
Position
23:27569706..27699460
Genome browser
AA seq
2495 aa
AA seq
DB search
MKILLIIFVLILWTETLADQSPGPGPEYADVVFLVDSSNHLGTKSFPFVKTFISKIINSL
PIEAHKYRVALAQYSDQLHSEFQLGTFKSRNPMLNHLKKNFGFVGGSLRIGQALREAHRT
YFSRPDSGRDKKQFPPILVVLASAESEDDVEEPSKALRGDGVRIISVGLQSASEQELKAM
ATGQFHFNLRSARDLGAFAPNMTQIIKEATQYREVAALDDVKVPLPMACQRDSLADLMFL
VDESVGTRQDLRNLQNFLRNITASMDMRYNCTRLGLMSYSDGAKTISLLNSSTSQYEFQE
QIQKLSFQAGKSHAGAAIEKMRLEAFSESSGSRRAQGVPQIAVLVTHRPSTDEVRDAALQ
LRLQDVTVFAMNIQGANDTQLEEIVSYPPRQMVSMLKSYADLEAYSNNFQKKLQNEIWSQ
ISVRAGQMDLDRTGCIDTKEADIYFLIDGSTSINTEGFEQIKQFMLAVTGMFSIGSDKVQ
AGAVQYSDKIRVEFYINASSNDMDLRKAILNIEQLQGNTHTGKALDFMLSIIKKDRKHRI
SEIPCHLIVLTDGKSQDEVLKPAERLRDEQITIHAVGIGEADKIQLQQIAGEEERVNFGQ
NFDSLRNIKNEVVHRICTEKGCEDMKADIMFLVDSSGSIGHDNFGKMKTFMKNLLAKIQI
GPDSTQIGVVQFSDINQEEFQLNKYFTQNETSDAIDRMSLINRGTLTGSALTFVGQYFTP
TKGARTKVKKFLILITDGEAQDPVRDPAKALRDKGVVIFSVGVYGANRTQLEEISGDSSL
VFQVENFDDLKTVESKLVFRVCALHDCKNIKVLDIVFVLDHSGSIGTQEQESMMNLTIHL
VKKADVDSDRVRVGALKYSDYPEVLFYLSGNKSAVIEHLRRRRYTSGHTYTARALEHANI
MFTEEYGSRIQQNVKQMLIIITDGVSHDRDNLSDTALKLRNKGINIYAVGVGQANQLELE
TMAGNKSNTFHVDNFSNLKDIYLPLQEKMCTNAHEPCDIQEADVIFFCDGSDMVSNSEFA
TMTTFVSDLIDNFNIQNQRIKIGLAQFGSRFQKIIELKNSLTIQELKTQIQTITKSKGFP
RIDLALKEVKAMFDSSSGGRRNAGVPQTLVVLTSGDPYYDVANEVKILRNLGICVLVWGI
GNVHKEQFLPITGNSEKIITLHNFNKLNNVDVKKRMVREICQSCGKTNCFMDIVVGFDIS
THLPGQPLFHDHPRLRSYLPDILEDITSIRRVSCGAGTEVQVNVAFKVNNDQEFPAKFQI
YQRAMFDSLLQVTVDGPTHLNAQFLLSLWDTFEAKSKSQGQVLLIFSDGLGGESEIMLEN
QSDRLRKAGLDALLVVSLNTTAHDEFSSFEFGKGFDYRTHLTIGMRELGKKLSQYLGNIA
EKTCCCTFCKCSGAPGLYGSRGLRAMKGSPGLKGTRGHRGEDGDPGRRGDIGPTGDSGTA
GCPGEQGQKGAKGFSGSKGEHGEDGIDGLDGEEGIHGFPGAKGEKGDPGSQGSPGSRGPP
GGYGEKGFPGDPGNPGQNSNIKGQKGSKGEQGRQGRTGQKGIPGDPNSRGSRGREGRRGS
PGALGEPGNPGPQGTQGADGLQGPQGLNGIPGRKGEKGSEGHKGPQGSSGPVGAKGNVGS
PGPPGKKGESGILGDPGPMGQAGQRGRQGDDGIPGYGHMGRKGVKGPRGFTGDMGQKGDV
GDPGVPGGPGPKGYRGLTLTVGRKGEEGSPGPPGPPGRRGMKGMAGKPVYSQCDLIQFMR
DHSPCWKEKCPVYPTELVFALDQSNSVSEQRFNEMRDIITSIVNDLNIRESNCPVGARVV
VVSYDTGTSYLIRWSDYHSKKQLLQLISQIKYRPPTEAQDIGNAMRFVARNIFKRTYGGA
NVRKVAVFFSSGQAASQSSIITATMEFNALDISPAVFAFSERIFLEAFEFDNTGTFQVIP
VSPNGKYEPLEKFQHCTLCYDKCFPNVCIKEIFLPENSYMDVAFLLDNSQTIANDEFKAV
KTLVSSMIDNFNISSDPRISDFGDRIALLSYSPWDTSRRKKGVVKTEFGFTTYNDRVLMK
RHIQTSLQQLKGEATIGHTLLWTVENLFPQTPNLRKHKVIFVILAGEYHERKEFLKKVAL
KAKCQGYVIFVVSLGFTHMDDMEELASYPLDHHLIQLGRIHKPDLDYVMKFVKPLVYYIR
RGFNQYPPPVLENTCRLINSEEEDNQNSYLLFTPETQEFSSGEDSFIGQELSAKSDTSFV
WENGGSAHVAYINDRVKPQGLMITYEKGQDSEGIASFTSGHENHGRKEEPGVINIPGDTS
LQEYYMDVAFLIDASQRIGNDEFREVKAFLISVLDYFHIAPDPLTSMLGDRVAVLSYSPP
GYMPNSEECPVYLEFDLITYNSIYQMKHHLQDSFQQLNGDVFIGHALQWTIDNVFVGTPN
LRKNKVIFVISAGETNPLEKEVLRNVALRAKCQGYTIFVFSFGPIHNDKELEELASHPLD
HHLVQLGRTHKPDLNYITKFVKPFVHLIRHGEDTR
NT seq
7488 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctactaattatatttgtcttaatcctttggactgaaacattggcagatcag
agtccagggccaggccctgagtatgcagatgtcgtgtttctggtggacagctccaatcac
ctgggaactaagtccttcccctttgtgaaaacgttcatcagcaaaatcatcaacagcctc
cccatcgaggcccacaagtaccgcgtggccctggcccagtacagcgaccagctccacagt
gagttccagctgggcacgttcaagagcaggaaccccatgctgaaccacctcaagaagaac
ttcggcttcgttggtggctccctgcgcataggccaagccctccgggaggcccacaggacc
tacttctccaggcccgacagcgggagggacaagaagcagtttcccccgattctggtggtc
ctggcttcggccgagtccgaggatgacgtggaggagccctcgaaggccctgcggggagac
ggggtgagaatcatctccgtggggctgcagagcgcgtctgagcaggagctgaaggccatg
gccacggggcagtttcatttcaacctgcggtcggccagggaccttggagcgtttgcccca
aacatgacgcagatcatcaaggaagccacccagtacagggaggtagcggccctggatgat
gtaaaagttcctctcccaatggcctgtcagagagattcattagctgacctcatgttccta
gtggatgagtctgttggcaccagacaagatttaaggaacttgcagaatttcctgaggaac
attactgcctccatggatatgaggtacaactgcacacgccttggacttatgagttatagt
gatggagccaagacgatttcccttctaaattcaagcacaagccagtatgaatttcaggag
caaatccagaagctttctttccaggctgggaaatcccatgctggggctgccattgagaag
atgaggctagaagccttctcagagtcaagtggcagcagaagggcacaaggagtgcctcag
atcgcagtcttggtcactcacagaccatcaactgatgaggtgcgtgatgccgcactacaa
cttcggctgcaggatgtgactgtgtttgccatgaacatccaaggggctaatgacacccag
ttagaagaaatagtgtcttaccctccgagacaaatggtttccatgctcaagtcctatgca
gacttagaagcttacagtaataacttccagaaaaagcttcagaatgaaatttggtctcaa
atttctgttcgtgctgggcaaatggaccttgacagaactggctgtatagatacaaaagaa
gctgatatctatttcctcattgatggctcaaccagcataaatacagaagggtttgagcaa
atcaagcaatttatgttggcggtgacaggaatgttcagcattggctcagacaaagtccaa
gctggagctgtgcagtattcagataaaataagagtggaattttatatcaatgccagttct
aatgatatggacttaagaaaggctattttgaacattgagcaactccaaggaaatactcat
actgggaaagccctggatttcatgctgtcaataataaagaaggataggaagcataggata
agcgagattccctgtcacctcattgtgctgactgatgggaaatcccaagatgaagtgctg
aagcctgctgagagattaagggatgaacaaatcaccattcatgcagttggcattggggag
gctgataaaatacaactccaacaaattgctggggaagaagaaagggttaactttgggcag
aacttcgattctttaagaaacattaaaaatgaagttgttcacagaatctgcactgaaaaa
ggatgtgaagacatgaaggccgacatcatgtttctggtggacagttctggcagcatagga
catgacaattttggaaaaatgaaaaccttcatgaaaaacctattagcgaagattcagatt
ggtccagacagcactcagattggtgtcgttcagttcagtgatataaatcaggaagaattc
cagcttaataaatattttacgcaaaatgagacttctgatgcaatagacaggatgtctctc
atcaacagaggcactttgactggaagtgcactaacctttgtaggtcaatacttcaccccc
accaagggggcccggactaaggtcaaaaagtttcttatcctcatcacggatggagaagcc
caagatcctgtgagagaccctgctaaagctcttcgggacaaaggtgtggtcatcttctct
gtgggggtgtacggtgccaacaggacacagctggaggagatcagtggggatagcagcctg
gtcttccaagttgagaactttgatgatctaaagacagtagaaagcaaactcgtttttcgt
gtatgtgctctccatgattgtaaaaatattaaagtgttggacattgtgtttgtgctggat
cattcaggcagcataggcacacaagaacaagaaagcatgatgaacctaactatccatttg
gtgaagaaagcagatgttgacagcgaccgagttcgggttggagctctcaaatactcggac
tatcctgaggttcttttctaccttagtggaaataaatctgcagtcattgagcatctgagg
aggcgcaggtacactagcgggcatacctatactgccagggctcttgagcacgcaaacata
atgttcacagaggaatatggcagccgcatccagcaaaatgtgaagcagatgctgatcatc
atcaccgatggggtgtcccatgatcgagataacctcagtgacacagcattgaaattaaga
aacaaaggcatcaatatctacgcagtgggtgtaggacaggccaaccaacttgaacttgag
actatggcagggaataaaagcaatactttccatgtagataatttcagtaacctgaaagac
atttacctgcctctacaagaaaaaatgtgtaccaatgcacatgagccgtgtgacattcaa
gaagctgatgtgattttcttttgtgatggctctgacatggtatccaattccgagtttgct
accatgacaactttcgtgtcagacttaattgataattttaacattcagaatcagagaata
aaaattgggttggctcaatttgggagtcgcttccaaaaaattatcgagttgaaaaactct
ctgactatacaggaattgaagactcaaattcaaacgatcaccaagagcaaagggtttcca
cgaatcgatctggcccttaaagaagtgaaagctatgtttgattcatcttctggtgggaga
agaaatgctggtgtccctcaaactttggttgttctcacatccggggatccctactatgat
gtggcgaatgaagtgaagatcttgagaaacctcggaatttgtgtcctggtttggggcata
ggaaatgttcataaggagcaatttctgccgataacaggcaattctgaaaaaataatcact
ctccataactttaataaattaaacaatgtggatgtgaaaaaaagaatggtccgtgaaatc
tgccagagctgtgggaaaacgaattgctttatggacatagtggtcgggtttgacatttcc
actcacttgccggggcagccgttgttccatgaccacccccggctgagatcttacctccca
gacatcttagaggacatcacttccatcaggagggtaagctgcggggcaggcacagaggta
caggtgaatgtggccttcaaggtgaacaatgaccaagaattccctgccaagttccaaatc
taccagagagcaatgtttgacagcctgctgcaagtcaccgttgatgggccaactcatctg
aatgcacagttcttgctgtcactgtgggatacatttgaggctaaatccaaatcccaagga
caggtgctactcatcttttcagatggtcttgggggtgaaagtgagataatgcttgaaaat
caatcagacaggctcagaaaagcaggacttgatgctctgctggtggtgtccctaaacacg
actgcccatgatgagttttccagctttgaatttggaaagggatttgattacaggactcac
ttgaccattggcatgagagagctgggcaagaagctatcacagtacctgggaaacattgca
gagaagacttgctgctgcacattttgcaagtgttcaggggctccaggtctttatgggtcc
cgaggactacgagccatgaagggttctccgggcttgaaaggtaccagaggacaccgggga
gaagatggagaccccggaagacgaggagatattggacccacaggagatagcgggactgca
ggatgtccaggagagcagggtcaaaaaggagccaaaggattttctggaagtaagggagaa
catggagaggatgggattgatggactggatggggaagagggcattcatggatttcctggg
gcaaagggagaaaaaggtgatccaggatctcagggcagtccaggttccagaggcccccct
gggggatatggagagaagggcttcccaggagatcctggtaatccaggacaaaacagtaac
atcaaaggacaaaagggctccaaaggagaacaaggaagacaaggtagaactggacagaaa
gggataccaggtgatcctaattccagaggaagtaggggaagggaaggccgaagggggtcc
ccaggggccttgggggagccgggaaatcctggacctcaaggtacccagggagctgacgga
ttacaaggcccacagggattaaatggaattcctggcaggaaaggagagaagggaagcgag
gggcataaaggacctcagggctcttctgggccagtgggagctaaagggaatgttggaagt
cctgggcctccagggaaaaaaggagaatctggaattcttggagatccagggccaatgggg
caagctggacagagaggaagacagggagatgatggcatcccaggctatggtcatatggga
agaaagggcgtaaagggcccaagaggattcactggagatatggggcaaaagggtgatgtt
ggtgatcctggagttcctggaggtcctggacccaaaggatataggggattaacactcact
gttggccggaaaggtgaggagggatctccaggacccccaggccctcctggacgaagaggc
atgaaaggcatggcagggaagcctgtatattctcaatgtgatctgatccagttcatgcgg
gaccatagtccctgttggaaagaaaagtgtccagtgtacccaacggagctggtatttgcc
ctggaccagtccaacagtgtctctgaacagagatttaatgaaatgagggacatcatcacg
tccatcgtcaatgaccttaacatcagggaaagtaactgccctgtgggagcaagagttgtt
gtggtttcctatgacacaggcaccagctacctcatccgctggtcagactaccatagcaag
aagcagctcctccagcttatttcccaaataaaatatcgaccccccacagaagcccaagac
attggtaatgcaatgaggtttgtggcccggaacattttcaagcgcacatacgggggagcc
aatgtgaggaaagttgctgtgtttttcagcagtggacaagcagccagtcagtcatccatc
atcacagccaccatggaatttaatgccctagatatcagtccggcagtctttgcttttagt
gaaaggattttccttgaggcttttgagtttgacaatactggaacatttcaggtgatccca
gtttctccaaatgggaagtatgagccattagaaaaatttcaacactgtacactttgctac
gacaaatgttttccaaatgtttgcatcaaagagatttttctacctgaaaattcatacatg
gatgtggctttcctcttagacaattctcagactatagcaaatgatgagtttaaggctgtg
aaaaccttggtgagctctatgattgacaacttcaacatttcatcagatccaagaatctca
gactttggtgataggattgccttgttgagctattctccttgggatacttctaggagaaag
aagggtgtggtaaaaacagagtttggatttacaacttataatgacagagtcctaatgaag
aggcatatccagacttccctccaacagctaaaaggagaagctaccattggccatacccta
ctgtggactgtggagaacctcttcccacaaacacccaacttgagaaaacacaaggtcatt
tttgtgatcttagctggagagtatcatgagagaaaggaattcttgaagaaggtagctctg
aaggccaagtgccaaggctatgtcatatttgtggtttccctgggctttacacatatggat
gacatggaagagttagccagctacccacttgatcaccatctgatacagcttgggagaatt
cataaaccagatctggattatgttatgaagtttgtaaagccacttgtttactatatcaga
cgaggattcaatcagtatccaccaccagtgcttgagaatacctgtagactcatcaattca
gaagaagaagataatcaaaacagttatctcctatttactcctgagacacaggagttttct
tcaggagaggacagcttcattggccaggaattaagtgctaaatcagacacatcttttgtg
tgggagaatggtggaagtgcccatgtggcttacataaacgacagggttaagccacaagga
ttaatgatcacatatgaaaaaggtcaggattctgaaggaattgcaagttttacttctgga
catgaaaaccatggcagaaaagaagaaccaggtgttattaatatacctggagatacctct
cttcaagaatattacatggatgtggctttcctcatagatgcttcccaaagaataggaaat
gatgagtttagggaagtgaaagcttttcttatctcagtgcttgattactttcacattgcc
ccagacccactgacctccatgttaggagacagagttgcagtcctgagctattctcctcca
ggctatatgccaaacagtgaagaatgccctgtctacctggaatttgatttgattacttac
aacagtatataccaaatgaaacatcatctccaagactcttttcaacagctcaatggagat
gtttttattggccatgccctgcagtggacaattgacaatgtctttgtaggaactcccaac
ctgaggaaaaacaaagttatctttgttatatctgctggtgaaaccaatcccttagaaaag
gaagtcttaagaaacgtagctctgagagccaagtgtcagggctatactatatttgtgttt
tcctttggtcctatacacaatgacaaggaattagaagaattagccagccacccactggat
catcacttagtccagcttggccgaacccacaagccagatttgaactatatcaccaagttt
gtcaagccatttgttcatttaatcagacatggtgaggacacaagatga
DBGET
integrated database retrieval system
