Canis lupus familiaris (dog): 485862
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Entry
485862 CDS
T01007
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X2
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03250
Viral life cycle - HIV-1
cfa04623
Cytosolic DNA-sensing pathway
cfa05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
485862 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
485862 (SAMHD1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
485862 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfa03400
]
485862 (SAMHD1)
DNA repair and recombination proteins [BR:
cfa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
485862 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
SAM_1
SAM_2
HD_assoc_2
PDEase_I
Motif
Other DBs
NCBI-GeneID:
485862
NCBI-ProteinID:
XP_038313416
Ensembl:
ENSCAFG00000008659
VGNC:
45856
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All DBs
Position
24:complement(25269008..25324975)
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AA seq
583 aa
AA seq
DB search
MASLTSKERLSSHFPQHDQSTGPKLKNKITGLTLLHLNEADLERLGISTLGDRKKLQACI
QQLSEIHVDAMKVINDPIHGHIELHPLLIRIIDTPQFQRLRYIKQLGGSYYIFPGASHNR
FEHSLGVGYLAGCLVRALREKQPELQISGRDVLCVQIAGLCHDLGHGPFSHMFDGRFIPL
ARPNVKWTHEQGSVMMFEHLVNSNGLKAVMEQYGLIPEEDICFIKEQITGPLETPIKDSL
WPYKGRPKEKSFLYEIVANKRNGIDVDKWDYFARDCHHLGIQNNFDYQRFLKFARVCEVD
NRKRICTRDKEVGNLYDMFHTRNTLHRRAYQHKVGNIIDTMITDAFLKADPYIEITGAEG
KKYHISTAIDDMEAFTKLTDNIFLEILYSSDPNLNEAREILKKIEYRDLYKYVGETKPKG
KIRIERENYKSLPEEIARAKPSDIPLEAELKAEDLIVDVINMDYGMEDKNPIDHVRFYCK
SDLSKAVMITKDQVSEFLPERFAEQLIRVYCKKTDADTLFAVKQHFVHWCLIRDFTKPQD
GDVVAPLITPRKAEWNNMDSAQSPDHFRERSKFKLRLFQDDSM
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtttgacatcaaaggagaggctgagcagtcatttccctcaacatgaccagagc
acagggccaaagttaaaaaataaaatcacaggtctaacattgctccaccttaatgaggct
gatcttgaaagacttggaataagtaccttgggtgacagaaagaagctccaagcttgtatc
caacaactgagtgaaattcatgttgatgcaatgaaggtaattaatgatcctatccatggc
cacattgaactccaccctctcctcatccgaatcatcgacacacctcaatttcagcggctt
cgatatatcaaacagttgggaggcagttactacatttttccaggtgcttcgcacaatcga
tttgagcacagtctaggtgtagggtatctagcaggatgtctggttcgtgcactgcgtgag
aagcaaccagagctgcagataagtggacgagatgtgctctgtgttcagattgctggcctt
tgtcatgatctcggtcatgggccattttctcatatgtttgatggaagatttattccactt
gctcgcccaaatgtgaaatggacgcatgaacagggctcagtgatgatgtttgagcacctg
gttaattctaatggactaaaagcggtcatggaacagtatggtctcatccctgaagaagat
atttgctttatcaaggaacaaattacaggaccacttgaaacaccaatcaaagattctttg
tggccttataaaggacgtcccaaagagaaaagcttcctttatgaaatagtggccaataaa
agaaatggcattgatgtggacaaatgggattattttgccagggactgccatcatcttgga
atacaaaataattttgattaccagcgctttcttaaatttgctcgtgtctgtgaagtagat
aataggaagcgtatttgcactagagataaggaggttgggaatctgtatgacatgttccat
actcgcaacactttgcaccgcagagcttatcaacacaaagttggcaacatcattgataca
atgattacagatgctttcctcaaagcagacccctacatagagattacaggggctgaagga
aagaagtatcacatttctacagcaattgatgacatggaagccttcacaaagctaacagat
aacatttttctggagattttatattcttctgatcccaacctgaatgaagcacgagagatt
ttaaaaaaaatcgaataccgtgatctatacaagtatgtgggtgagactaagccaaaggga
aaaataagaattgaaagggaaaactataaaagccttccagaggaaattgccagggctaaa
cctagtgacataccactagaagctgaactgaaggctgaagatttaatagtggatgttatc
aacatggattatgggatggaagacaagaatccaattgatcatgttcgcttctattgtaag
agtgacctcagcaaagcagtcatgattactaaagatcaggtttcagaatttttgccagag
agatttgcagagcagctaattcgtgtatactgtaagaagactgatgcagacacattgttt
gctgtgaaacaacatttcgttcattggtgcttaatcagagacttcaccaagcctcaggat
ggtgatgtggtggccccacttataacacctcgaaaagcggagtggaataacatggattca
gcccagagcccagatcacttccgagaaaggtccaaatttaaactccggctttttcaggat
gactcaatgtga
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