Canis lupus familiaris (dog): 486014
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Entry
486014 CDS
T01007
Symbol
PDS5B
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
486014 (PDS5B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cfa03036
]
486014 (PDS5B)
03400 DNA repair and recombination proteins [BR:
cfa03400
]
486014 (PDS5B)
Chromosome and associated proteins [BR:
cfa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
486014 (PDS5B)
DNA repair and recombination proteins [BR:
cfa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
486014 (PDS5B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PI-TkoII_IV
EnP1_C
Motif
Other DBs
NCBI-GeneID:
486014
NCBI-ProteinID:
XP_005635530
Ensembl:
ENSCAFG00000006351
VGNC:
44393
LinkDB
All DBs
Position
25:complement(7437222..7617068)
Genome browser
AA seq
1448 aa
AA seq
DB search
MAHSKTRTNDGKITYPPGVKEISDKISKEEMVRRLKMVVKTFMDMDQDSEEEKELYLNLA
LHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDT
KSPQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDL
MSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQV
LMLGKTSISDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMF
GAKDSELASQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAKDLTEYLKVRSH
DPEEAIRHDVIVSIVTAAKKDILLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYA
LQSAAGKDAAKQISWIKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETTERMKCLYYL
YATLDLNAVKALNEMWKCQNLLRHQVKDLLDLIKQPKTDASVKAIFSKVMVITRNLPDPG
KAQDFMKKFTQVLEDDEKIRKQLEVLVSPTCSCKQAEGCVREITKKLGNPKQPTNPFLEM
IKFLLERIAPVHIDTESISALIKQVNKSIDGTADDEDEGVPTDQAIRAGLELLKVLSFTH
PISFHSAETFESLLACLKMDDEKVAEAALQIFKNTGSKIEEDFPHIRSALLPVLHHKSKK
GPPRQAKYAIHCIHAIFSSKETQFAQIFEPLHKSLDPSNLEHLITPLVTIGHIALLAPDQ
FAAPLKSLVATFIVKDLLMNDRLPGKKTTKLWVPDEEVSPETMVKIQAIKMMVRWLLGMK
NNHSKSGTSTLRLLTTILHSDGDLTEQGKISKPDMSRLRLAAGSAIVKLAQEPCYHEIIT
LEQYQLCALAINDECYQVRQVFAQKLHKGLSRLRLPLEYMAICALCAKDPVKERRAHARQ
CLVKNINVRREYLKQHAAVSEKLLSLLPEYVVPYTIHLLAHDPDYVKVQDIEQLKDVKEC
LWFVLEILMAKNENNSHAFIRKMVENIKQTKDAQGPDDAKMNEKLYTVCDVAMNIIMSKS
TTYSLESPKDPVLPARFFTQPDKNFSNTKNYLPPEMKSFFTPGKPKTTNVLGAVNKPLSS
AGKQSQTKSSRMETVSNASSSSNPSSPGRIKGRLDSSEMDHSENEDYTMSSPLPGKKSDK
RDDSDLVRSELDKPRSRKKTPVTDSEEKLGMDDLTKLVQEQKPKGSQRGRKRGHTASESD
EQQWPEEKRLKEDILENEDEQNSPPKKGKRGRPPKPLGGGTPKEEPTMKTSKKGAKKKSG
PSAPEEEEEEERQSGNTEQKSKSKQHRTSRRAQQSRAESPETSAVESTQSTPQKGRGRPS
KTPSPSQPKKNVRVGRSKQAATKENDSSEEVDVFQGSSPVDDIPQEETEEEEVSTVNVRR
RSSKRERR
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atggctcattcaaagacaagaaccaatgatggaaaaattacttatcctcctggtgtcaag
gaaatctcagataaaatatctaaagaggagatggtgagacggttaaagatggttgtgaaa
actttcatggatatggaccaggactctgaagaagaaaaggagctttatttaaacctagct
ttacatcttgcttcagatttttttctcaagcatcctgacaaagatgttcgcttactggta
gcctgctgccttgctgatattttcaggatttatgctcctgaagctccttatacatcccct
gataaactaaaggatatatttatgtttataacaaggcagttgaaggggctagaagataca
aagagcccacaattcaataggtatttttacttacttgagaacattgcttgggtcaagtcg
tataacatttgctttgagttggaagatagcaatgaaatttttacgcaattatacagaaca
ttattttcagttataaacaatggccacaatcagaaagttcatatgcacatggtagacctc
atgagttctattatttgtgaaggtgatacagtatctcaggagcttttggatacagttttg
gtaaatctggtacctgcccataagaatttgaacaagcaagcatatgatttggcaaaggct
ttactgaagaggacagctcaagctattgaaccatatattaccaatttttttaatcaggtt
ctgatgcttgggaaaacatctatcagcgatttgtcagaacatgtctttgacttaattttg
gagctctataatattgatagtcatttgctgctctcagttttaccccaacttgaatttaaa
ctaaagagcaatgataatgaggaacgcctacaagttgttaaactactggcaaaaatgttt
ggagcaaaggattcagaattggcttctcaaaacaaaccactttggcaatgttacttgggc
aggtttaatgacatccatgtaccaatccgtctggaatgcgtgaagtttgctagtcattgt
ctcatgaaccatcctgatttagcaaaggacttaacagagtatcttaaagtgaggtcacac
gatcctgaggaagctattagacatgatgttattgtgtctatagttacagctgctaaaaag
gatattcttctggtcaatgatcacttacttaattttgtgagagagagaacgttagacaaa
cggtggagagttcgtaaggaagccatgatgggacttgcccaaatttataagaagtatgct
ttacaatcagcagctggaaaagatgctgcaaaacagatttcatggatcaaagacaaattg
ctacatatatactaccaaaatagtattgatgatcggttgcttgttgaacggatctttgcc
caatatatggttcctcacaatttggaaactacagaacggatgaagtgcttatattacttg
tatgccacactggatttaaatgctgtgaaagcattgaatgaaatgtggaaatgtcaaaat
ctgctccgacatcaagtgaaggatttgcttgacttaattaagcaacccaaaacagatgcc
agtgtcaaggccatattttcaaaagtgatggttattacaagaaatttgccagatcctggt
aaggctcaagatttcatgaagaagttcacacaggtgttagaagatgatgagaaaataaga
aaacagttagaagtacttgttagtccaacatgttcctgcaaacaggctgaaggttgtgtg
cgtgaaataactaagaagttgggcaaccccaagcagcctacaaatcctttcctggaaatg
atcaaatttcttttggagaggatagcacctgtgcacatagatactgaatctatcagtgct
cttattaagcaagtgaataaatcaatagatggaacagcagatgatgaagatgagggtgtt
ccaactgatcaagccatcagggcaggtcttgaactgcttaaggtactctcatttacacat
cccatctcgtttcattctgctgagacatttgaatctcttctggcttgtctgaaaatggat
gatgaaaaagtagcagaagctgcactccaaatttttaaaaacacaggaagcaaaattgaa
gaggatttcccacacatcagatcagctttgcttcctgttttacatcacaaatctaaaaaa
ggacccccccgccaagccaaatacgccattcattgtatccatgcgatattttctagtaaa
gagacccagtttgcacagatatttgagcctctgcataagagcctagatccaagcaacctg
gaacatctcataacaccgttggttactattggacatattgctctccttgcacctgatcaa
tttgctgctcctttgaagtccttggtagctactttcattgtgaaagatcttctcatgaat
gatcggctcccaggaaaaaagacaactaagctttgggttccagatgaagaagtttctcct
gagacaatggtcaaaatccaggctattaaaatgatggttcgatggctccttggaatgaaa
aataatcacagtaaatcaggaacatctaccttaagattactaactactatattgcatagt
gatggagacttgacagaacagggaaaaattagtaaaccagatatgtcacgtctgagactt
gctgctgggagtgctattgtgaagctggcccaagaaccttgttatcatgaaatcatcaca
ttagaacagtatcagctctgcgcattagctatcaatgatgaatgctatcaagtaagacaa
gtgtttgctcagaaacttcacaaaggcctttcccgattacggcttccacttgagtatatg
gcaatctgtgcactttgtgcaaaagatcctgtaaaagagagaagagctcatgctaggcag
tgtctggtaaaaaatataaatgtgagacgagagtatctgaagcagcatgcagctgttagt
gaaaaattattgtctcttctaccagaatatgttgttccatatacaattcacctattggca
catgacccagattatgttaaagtacaggatattgaacaacttaaagatgttaaagaatgt
ctttggttcgttcttgaaatattaatggctaaaaatgaaaataacagtcatgcatttatc
aggaagatggtagaaaatattaaacaaacaaaagatgcccaaggaccagatgatgcaaaa
atgaatgaaaaactgtacactgtgtgtgatgttgccatgaatatcatcatgtcaaagagc
actacatacagtttggaatctcctaaagacccagtactaccagctcgttttttcacccaa
cctgataagaatttcagtaacaccaaaaattatctgcctccagaaatgaaatcgtttttc
acacctggaaaacctaaaacaaccaatgttctaggagctgttaataagccactttcatcg
gcaggcaagcaatctcagacaaaatcatcacgaatggaaactgtaagcaatgcaagcagc
agctcaaatccaagctctcctggaagaataaaagggaggcttgatagctctgaaatggat
cacagtgaaaatgaagattatacaatgtcttcacctttgccaggaaaaaaaagtgacaag
agagacgactctgatcttgtaaggtctgaattggacaaacctagaagccggaaaaaaaca
cctgtcacagattcagaagagaaattaggtatggatgacctcactaagttggtacaggaa
cagaaacctaaaggcagtcagcgtggacggaagagaggccatacggcttcagaatcagat
gaacaacagtggcctgaggaaaagaggctcaaagaagatatattagaaaatgaggatgaa
cagaatagtccaccaaaaaaaggtaaaagaggccgaccacctaaacctcttggtggaggt
acaccaaaggaagagccaacaatgaaaacttctaaaaaaggagccaaaaaaaaatctgga
ccttcagcaccagaagaagaggaagaagaagaaagacaaagtggaaacacagaacagaag
tcaaagagcaaacagcaccgaacatcaaggagagcacaacagagcagagcagaatctcct
gaaactagtgcagttgaatccacacaatccacaccacagaaaggacgaggaagaccatca
aaaacgccatcaccatcacaaccaaaaaaaaatgtccgtgtaggacgctccaaacaagca
gctactaaagaaaatgattcaagtgaagaagtagatgtgtttcagggtagctctcctgtc
gatgatattccacaggaagaaacagaggaagaggaagtttctacagtaaatgtacggcgg
cgaagttctaaaagggaaaggcgatga
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