Canis lupus familiaris (dog): 486085
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Entry
486085 CDS
T01007
Symbol
RP1L1
Name
(RefSeq) retinitis pigmentosa 1-like 1 protein
KO
K19538
retinitis pigmentosa 1
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cfa03037
]
486085 (RP1L1)
04812 Cytoskeleton proteins [BR:
cfa04812
]
486085 (RP1L1)
Cilium and associated proteins [BR:
cfa03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
486085 (RP1L1)
Cytoskeleton proteins [BR:
cfa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
486085 (RP1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCX
DCX2_DCDC1
Motif
Other DBs
NCBI-GeneID:
486085
NCBI-ProteinID:
XP_013962952
VGNC:
45699
LinkDB
All DBs
Position
25:27977022..27991705
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AA seq
1957 aa
AA seq
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MNSTLRDAQAPSHRECLLPSVARTPSVTQITPAKKITFLKRGDPRFAGVRLAVDQRAFKS
FGALMDELSQRVPLSFGVRSVTTPRGLHGLSALEQLEDGGYYLCSDKKPPKTPSRPGWPQ
GRSSSAQQSRDFESRCEAPGTSSSCKGPKAPRRIVLVKNGDPRFQQTVVLSHRNTRNLMA
FLSKASDLLHFPVKQVYTTSGKKVDSLKGLLHSPSVLVCAGYESFKPLAVEDARRYGTET
LSGQTSRNKTGGWGPKAKQSVIHSRSRSGSRPRQCSLLSERSGLSDAPGSLHCAQTGPAP
DGHPQDVPAHPGPLVASDDVEKKVRMNEDGSLSVEMKVRFHLLGKDAVLWSRRVGRASAL
PAASEGVPVLGEVDSLHCVWEGHLGGSSEPGAQGLGPCGAGGCEEALGRSRWQPGSRYEI
WMNPLYSTQGDGTDSRRRSRLTQHSHSRRPCSQRFTSRKRSSKDSVSPASSDRCPRDSEP
NSSCCSRSPGSSMGSCDLQSASGAISQRGAGWEGGDPSGTSESPGPQGAGQGSRECHSRL
KAQTQGTAGALFDSSGSAGSHEESSERGEQPQGCPSKTRAVSTSRPKITQREGLSPPTVS
PLFLRDEDSQEEESGQGTRHSQAKDRSGMRWRLALRHFGSRDIAGSCSPVPGRRRKQKGR
ASAMSLPSQGAQTGHPRHHRPLDSPVPKKMPGPPSRARACPDGPAPHLSESSPSARNRAS
QDTGPSSSASLHSQYALITPVSNSECASNFYPPYSLSAETEGDPKLRASSPAPTPSNTSD
SLGNQADGLDKKPGGDIPKPSWPLDPPGGQPEGGMPGAHRGCSCSPISTSMFHGTPSDET
HAPQTSQPLGSQGVFSEVCLECSRYCPTPPRTWPFVKKHAYCSSSSSADCGPGRGELGEG
KLDMWRPQPPACQPGAMGKAVKASRRGSSSCGPRSGRVFQKKVAGGGKSLEEEEKDGRKM
LRALPRASPDTVVREWLSNIPEEPIPMKCEMVGDSTDVAGDDPEGPKEDPVGRHSPECLG
EPTQVRQLLHEGAASEKAEPDGALPVPGDAHSKSGEGLPCSGISQDPREAGSGKGMAVDR
GVGQCLLPHKLSASIQVMKALIGSKQGRPSSLPEVSSAVGRRLSRSAQALITCLAGLHFF
DEDLGSPTGQVRFIDSPRYQELLSIFQALWPACGLRRGEVDSGLWELGRCQALPGLRSHV
MTEDLTPTSSSGVDVGSGSGGSGEGSGPCAMDCAMVPERITLPLKIPSLRQDSRTSENRE
DPGNQEPSGSTASSNSQAWACATRKDEAERNSGQQVLGSNLDPVVDNTMQEEEVQVEKKV
REEKEIAELQGEGVPGFPEEETVMGQELSEANSQAGEGAPEDKSVQEEEAGDPASPILCP
PGRKEKPTEPPRSLSEGHPNASETESDPKVEPGLEKLPKAAETCHEQSQVKCTQGPGEKS
SSAVRRVSLDPDPLWVSRLLKKMEKAFMAHLASATAELRARWSLQNNILLDQMVAELHQD
LGRRLEDSIEKELRKVQSRAGGKMQGPAREGLRWEMSLQTEQRRRRLQDLRRLSAFSRQA
RSQGPLALPTEDMPTLSGALGAWQVGEAEEEEFCPCEACMRKKVIPTSPKDTMEASRAPI
KKAFDLQHILQKKKGGCISGEAKEAAPEKRGMEPLQGDPFGTGTVQESDRGLELGLDQDS
GTEEGGEGESSQTLGREGDPRVGEGEASVQKREGSTGGPGSIPEGAGGEELSSGGKEENT
EEGSGAEGSLEGEDSGGGNRSPGDQNDGDKSEEIQEAEGEEGQPESGGGRGEGEEEKEGS
PQVDWGQGQPGETSGNSSPDPEGKPALPPTTGADSPCPRAGWKAGLASSSVASLGNCSQL
SQKGSEEKPLNGDMRSIEEESEEIPGPERTGTGMYPESSTSEKEGAPSGPRTPEQEAGKA
SGLEAEKVVKTLAFTEMGFQNLPVDRTDGFGQDDLDF
NT seq
5874 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcaccttgagagatgcccaggccccgagccaccgtgagtgcctcctgccttct
gtggcccggaccccctctgtcacccagatcacgccagccaagaagataaccttcctcaag
cgaggggatccccggtttgctggggttcgcttggctgttgaccagcgcgctttcaagagc
tttggcgctctgatggacgagctctctcagcgcgtgcctctctcctttggggtgcgctct
gtcactacgccccggggcctgcatggcctcagtgccctggaacagctggaggatggtggc
tactacctctgctctgataagaagccccccaaaacacccagtaggccaggatggccacag
ggaagaagttcatccgctcagcaatcaagagattttgaaagtcggtgtgaggcaccagga
acatcctcttcctgcaagggtcctaaggccccaaggaggatagtgctggttaagaatggt
gaccctagattccagcagacagtggttctcagccatagaaatacaaggaacctgatggcc
tttctcagcaaagcttcagatcttttgcattttcctgtgaagcaggtgtacacaacaagt
gggaaaaaggtggactctctgaagggtctgctccacagcccctcagtgctagtatgtgct
ggttacgagtctttcaaaccactggcagtggaagatgccagaagatatgggactgaaact
ttatctgggcagacttcaagaaacaaaaccggaggctgggggccaaaggccaagcagagt
gtgatccattcaaggtccaggtcaggcagccggccacggcagtgctccttgctgtcagag
aggtctggtctcagcgacgccccgggatccctgcattgcgcccagacgggccctgctcct
gacggacaccctcaggatgtgcctgcccaccctggcccattggtggccagtgacgatgtt
gagaagaaggtccgcatgaatgaggatggcagcctatctgtagagatgaaagtccgcttc
cacctacttggcaaggatgcagtcctgtggtccaggagggtggggagggccagtgccctc
ccggcagccagtgagggggtccctgtcctgggggaggtggactccctccactgtgtgtgg
gagggccaccttgggggctcctcagagcctggggcacagggactggggccctgtggggca
ggaggatgtgaggaagccttgggccgaagccggtggcagccagggtccaggtatgaaatc
tggatgaaccccctgtactctacccagggagatgggacagactctcggaggagatccagg
ctgacccaacactcccattcccggaggccctgtagccaaaggttcaccagcaggaaaaga
agcagcaaggacagtgtcagccctgcctctagtgacagatgccccagagactctgagcca
aactcctcatgctgctccaggtctccggggagcagcatgggcagctgtgacctacagtca
gcctctggggctatctctcagagaggagcagggtgggaagggggtgacccatcggggacg
agtgagagcccaggtccacagggagcagggcagggcagcagggagtgccacagccgcctg
aaggcccagacccaaggcacagctggtgctctttttgactcctcaggaagtgctgggtct
catgaggagtctagtgaaaggggtgagcaaccccagggctgcccaagcaagacaagggct
gtgagtacttcccggccaaagatcacccagagggaaggtctcagtcctcccacagtgagt
cccttgtttttgagggatgaggactcacaggaagaggagagtggacagggtaccaggcac
tctcaggctaaggataggtctgggatgagatggcgcctggctctacgtcattttggctct
agggacattgcaggaagctgttctccagtcccaggcaggagaagaaagcagaagggccga
gccagtgctatgtccttacccagccaaggggctcagacaggccaccccaggcatcaccgc
ccacttgactcacctgtgcccaagaaaatgcctggacctcccagcagagccagggcctgc
ccagatggcccagcaccacacctttctgaaagctcacctagtgccaggaaccgggcctct
caggacacagggccatcctcctctgcctctcttcattcccagtatgctctcattacccct
gtgagcaattctgaatgtgcttccaatttctaccccccatattccctctctgctgagact
gaaggggaccctaaactcagggcaagctcaccagctcccacaccttccaacacatcagac
tctttgggcaaccaagctgatgggctggacaaaaagccagggggcgacattcccaagcct
tcctggcctttagatccgccaggtggacagcctgagggagggatgccaggagcccaccga
ggctgcagctgctcacccatcagcacatccatgttccacgggacccccagtgatgagact
catgccccgcagacttcccagccattaggcagccagggagtcttctctgaggtctgctta
gaatgcagcagatactgtcccactcccccaaggacatggccttttgtcaagaaacatgct
tattgcagcagcagctccagtgctgactgcgggccaggtcggggggagctgggggaggga
aaacttgatatgtggcgcccacagccccccgcctgtcagccaggggccatggggaaagca
gtcaaagcctcgagaaggggcagctccagctgtggtcccaggtctgggagagtattccag
aagaaagttgctggtggagggaaaagcctggaggaggaagagaaagatggcagaaagatg
ctgcgtgctctgccccgagcctcaccagacactgtggtccgtgaatggttgagcaacatc
ccagaggagcccatacccatgaaatgtgaaatggtgggtgacagcacagatgtggcaggg
gatgacccagaaggccccaaggaggatcccgttggccgacattccccagaatgtctaggg
gagccaacccaggtcagacaactgttgcacgaaggtgctgccagcgagaaagcagaacca
gatggagccctcccagtgcctggtgatgctcattccaagtcaggagaaggtcttccttgt
agcggaatttcacaagaccccagggaggctggatcaggcaaagggatggctgtggaccgt
ggtgtgggccagtgcctgcttccccacaagctctctgcctccatacaggtcatgaaggca
ctgataggctccaagcagggccggcccagcagcctccctgaagtgtccagtgcagtgggc
aggaggctcagccgatctgcccaggcccttatcacctgtcttgctgggctccacttcttt
gatgaagaccttgggtctcccactggccaagtgaggttcatagactctcctcggtaccag
gagctcttgagcatcttccaggctctgtggccagcgtgtggactcaggcgaggtgaggtg
gactcaggcctctgggagctgggccggtgccaggctctgccaggcctcaggtcccacgtc
atgactgaggacctcacaccaacgtcctcatctggtgtggatgtcggcagtggctctgga
ggctcaggggagggcagtggaccctgtgctatggactgtgccatggtccctgagaggata
acactgcccttgaagatcccctccctgagacaagattctagaacctctgagaaccgagag
gatccgggaaaccaagagccaagtggttccacagcctcttcaaactcccaagcatgggct
tgtgccaccagaaaagatgaggcagaaagaaacagtggacagcaggtgctaggcagtaac
ctggacccagtagttgacaacacaatgcaagaagaagaggtacaagtagagaagaaagtc
agagaagaaaaagaaatagcagaactgcaaggagagggtgtcccaggatttccagaagag
gaaacagtcatgggacaagaattgtcagaggccaactctcaggctggggaaggtgcacca
gaagataagagtgtgcaggaagaggaagcaggagaccctgcctcccccatactttgccct
ccagggaggaaagagaaacccacagagccacctaggagcctcagcgaggggcatccaaat
gccagtgaaactgaaagtgaccccaaagttgagcctggtttggagaagctgcccaaagca
gctgagacatgccatgagcaaagccaggtcaaatgcacccaggggcctggggagaagagc
tcttctgcggtccgtagggtgtctctggaccccgaccccctctgggtgtccaggttgctg
aagaagatggagaaggccttcatggcccaccttgccagcgccacggctgagctccgagcc
cgctggagcctacagaacaatatcctgctggaccagatggtagcagagttgcatcaagac
ctgggccggcggctcgaagatagcatcgagaaagagctccggaaggtccagagccgggca
gggggcaagatgcaggggccggccagggagggcctcaggtgggagatgtccctgcagaca
gagcagcgcaggcgccgcctccaggacctgcgccgcctctcggccttctccaggcaggct
cgaagccaggggcccctggccctccccacggaggatatgccaaccctcagtggagccctg
ggggcctggcaggttggggaggctgaggaggaggagttttgtccctgtgaggcctgcatg
aggaaaaaagtgatccccacgtccccaaaggacacaatggaggcatccagggcacccatc
aaaaaggccttcgacctgcagcacattctacagaagaagaaagggggatgcattagtggg
gaggccaaagaggcagcccctgagaagagagggatggagccgcttcagggggaccccttc
gggacagggactgtccaggagtctgatagaggcctggagctggggttagaccaggactct
gggacagaggaggggggtgagggtgagagcagtcagacccttggcagagagggagacccc
agagtgggagagggggaggcatctgttcagaagagagaagggagcacaggtgggccaggc
agcatcccagagggagcaggtggggaggagctgagctctggggggaaggaagaaaacaca
gaggagggctctggggctgaaggcagtttggaaggtgaagactcaggaggaggtaaccga
agcccaggagatcagaacgatggtgacaaaagtgaagagatccaggaagctgaaggcgag
gaggggcagccagagtcagggggaggaaggggagaaggagaagaggagaaagaaggtagc
cctcaggtcgactggggccagggccagccaggtgagacttctggaaacagcagcccagac
ccagaggggaagccagcgctgccccctaccacaggtgcagacagcccctgcccaagggca
ggctggaaagcaggccttgcctcctccagcgtggcatctctgggaaactgctctcagctc
tcccagaaaggttcggaagaaaagcccttgaacggagacatgaggagcatcgaagaggag
tccgaggaaatccctggtccagagagaacaggcacaggcatgtatccagaaagctccact
tctgaaaaagaaggggctccctcgggcccgaggactccagagcaggaggcaggcaaggcc
tctggcctagaagctgagaaggtagttaaaactcttgctttcacagaaatggggtttcaa
aacctccccgtggaccggacagatggctttggccaagatgacttagatttctag
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