Canis lupus familiaris (dog): 486246
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Entry
486246 CDS
T01007
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55 isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cfa03009
]
486246 (DDX55)
Enzymes [BR:
cfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
486246 (DDX55)
Ribosome biogenesis [BR:
cfa03009
]
Eukaryotic type
Pre-60S particles
Helicases
486246 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
SGT1
SBF_like
Met_asp_mut_E
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
486246
NCBI-ProteinID:
XP_022266232
Ensembl:
ENSCAFG00000007452
VGNC:
39865
LinkDB
All DBs
Position
26:complement(6185611..6199418)
Genome browser
AA seq
693 aa
AA seq
DB search
MEHVTEGSWESLPTQLHPQVLGALGQLGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKT
LAFVIPILEILLRREEKLKKNQVGAIIITPTRELAIQVDEVLAHFTKSFPQFSQILWIGG
RNPADDVSRFKEQGGNIIVATPGRLEDMFRRKVEGLDLASCVKSLEVLVLDEADRLLDMG
FEASINTILEFLPKQRRTGLFSATQTQEVESLVRAGLRNPVRISVKEKGVAASSTQKTPS
RLENYYMVCKADEKFNQLVHFLRNHKQEKHLIFFSVQVCVAVTVLAFYCCLSPHGLKMAS
VMPAFPSALKTEKGEKAEGVGRAFFTSEEQKAFSETPPPQLTQALSLGAKALGDPKWPVT
LSLLSPLGSTCACVEYYGKALEALVKSVKIMCIHGKMKHKRNKIFMEFRKLQSGILVCTD
VMARGIDIPEVNWVLQYDPPSSASAFVHRCGRTARIGHGGSALVFLLPMEESYVTFLEIN
QKCPLQEMKLQKNTGDLLPKLKSMALADRAVFEKGMKAFVSYVQAYAKHECNLIFRLKDL
DFASLARGFALLRMPKMPELRGRQFPDFVPADVDTNNIPFKDKIREKQRQKLLERQRKEK
RENEGRKNIKNKAWSKQKAKKEKKKRMNEKRKREEGSDIEDEDMEELLNDTRLLKKFKKG
KITEEEFEKGLFSSGKGTVTTADLGIPDLEEDC
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggagcacgtgacagagggttcctgggagtcgctgccgacgcagctgcacccgcaggtg
ctgggtgcgcttgggcagctgggctttccgcacatgacgccggtgcagtctgcaaccatc
cctctcttcatgaaaaacaaagatgtcgctgcagaggcggtcacaggtagtggcaaaaca
ctcgcttttgtcatccccatcctggagattcttctgagaagggaagagaagttaaaaaag
aatcaggtcggggcgatcatcatcacacccacccgggagctggctattcaggtagatgaa
gtcctggcgcatttcacaaagtccttcccacagttcagccagattctctggatcggaggc
aggaatcctgcagacgatgtttccaggtttaaggaacaaggtgggaacatcattgtggcc
actccaggccgcttggaggacatgttccggaggaaggtggagggcttggatctggctagc
tgtgtgaagtccctggaggtcctggtgttggatgaagcagacagacttctggacatgggg
tttgaggcaagcatcaacaccatcctggagtttttgccaaagcagaggagaacaggcctc
ttttcagcaactcagacacaggaagtggagagcctggtgagagcgggcctgcggaaccct
gtccggatctcggtgaaggagaagggtgtagctgccagcagcacccagaaaactccttcc
cgcctggagaactactacatggtatgtaaggcagatgagaaatttaaccagctggtacat
tttcttcgaaatcataagcaggaaaaacacctgatcttcttcagtgtccaggtctgtgtt
gctgtgactgtcttggccttttattgctgtttgtcccctcatggtctgaagatggccagt
gtcatgcctgctttcccatctgcactgaaaacagagaaaggagaaaaggcagagggagtg
ggaagggcattcttcacatcagaagagcagaaagctttctcagaaacccctcctccccag
ctgactcaagctttatctttaggggccaaagcactaggtgaccctaagtggccagtgact
ctgagcctgctgtcccctctcggcagcacctgtgcctgtgtggaatactacggaaaggcc
ctggaggccctggtgaagagtgtgaagattatgtgcattcacgggaagatgaaacacaag
cgcaataagatcttcatggagttccgcaaattgcaaagtgggattttagtgtgcacggat
gtcatggctcgaggaatagacattcctgaagtaaactgggttttgcaatatgaccctccc
agcagcgcaagtgcctttgtgcatcgctgtggccgcacagcccgcattggccacggtggc
agcgcgctcgtattcctccttcccatggaagagtcctatgtcactttccttgaaattaac
caaaaatgtcccctgcaggagatgaagctccagaaaaacacaggagatctccttccaaag
ctcaagtccatggccctggccgacagagctgtgtttgaaaagggcatgaaggcctttgtg
tcatatgtccaggcttatgcaaagcacgaatgcaacctcatcttcagattaaaggatctt
gattttgctagtcttgctcgagggtttgccctgctgcggatgcccaagatgccagaactg
aggggacggcagttcccagattttgtgcctgcagatgttgacacaaacaacattccattt
aaagataaaattagagagaaacaaaggcagaaactactggagcgacaaagaaaagagaaa
agagaaaatgaagggaggaaaaatataaaaaataaagcttggtcaaagcagaaggccaaa
aaggagaagaagaaaagaatgaatgaaaaaaggaagagggaagagggttctgatatcgaa
gatgaggacatggaagaacttcttaacgacacgaggctcttgaaaaagtttaagaaaggc
aaaattactgaggaagaatttgagaaggggttgttttcaagtggcaagggaacagtcacg
acagcagatttggggatccctgatttggaagaggactgctga
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