Canis lupus familiaris (dog): 486548
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Entry
486548 CDS
T01007
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03082
ATP-dependent chromatin remodeling
cfa04714
Thermogenesis
cfa05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
486548 (SMARCD1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
486548 (SMARCD1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
486548 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfa03021
]
486548 (SMARCD1)
03036 Chromosome and associated proteins [BR:
cfa03036
]
486548 (SMARCD1)
Transcription machinery [BR:
cfa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
486548 (SMARCD1)
Chromosome and associated proteins [BR:
cfa03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
486548 (SMARCD1)
PBAF complex
486548 (SMARCD1)
GBAF(ncBAF) complex
486548 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DivIC
Motif
Other DBs
NCBI-GeneID:
486548
NCBI-ProteinID:
XP_038316026
Ensembl:
ENSCAFG00000008306
VGNC:
46537
LinkDB
All DBs
Position
27:41620242..41633218
Genome browser
AA seq
464 aa
AA seq
DB search
MKRGERGHRPGMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGMDQSRKRPAPQQIQQV
QQQAVQNRNHNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEA
LKRPIKQKRKLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKR
KFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQ
PPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQR
MKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLST
ASQQEIATLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVG
NPEEERRAEFYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggggcgagcgggggcacagaccaggcatgctgccaggcagccgaatgacacct
cagggaccttccatgggaccccctggctatggggggaacccttcagtccgacctggcctg
gcccagtcagggatggaccagtcccgcaagagacctgcacctcagcagatacagcaggtc
cagcagcaggcggtccaaaatcgaaaccacaatgcaaagaaaaagaagatggctgacaaa
attctacctcaaaggattcgtgaactggtaccagaatcccaggcctatatggatctcttg
gcttttgaaaggaagctggaccagactatcatgaggaaacggctagatatccaggaggcc
ttgaaacgtcccattaagcaaaaacggaagctgcgaattttcatttctaacactttcaac
ccggctaagtcagatgccgaggatggggaagggacggtggcttcctgggagcttcgggta
gaaggacggctcctggaggattcagccttgtccaaatatgatgccaccaaacaaaagagg
aaattctcttccttttttaagtccttggtgatcgaactggacaaagacctgtatgggcca
gacaaccatctggtagaatggcacaggaccgccactacccaggagacggatggcttccag
gtgaaacggccaggagatgtgaatgtacggtgtactgtcctcctgatgctagactaccag
cctccccagtttaaattagaccctcgtctggctcggctcctgggcatccacacccagacc
cgtccagtgatcatccaagcactgtggcaatatattaagacacataagctccaggaccct
catgagcgggagtttgtcatctgtgacaagtacctccagcagatctttgagtctcaacgt
atgaagttttcagagatccctcagcggctccatgccttgcttatgccaccagagcccatc
atcattaatcatgtcatcagtgttgacccaaatgatcagaaaaagactgcttgttatgac
atcgatgtggaagtggatgatactttgaagactcagatgaattctttcctgctatctacc
gccagccagcaggagattgctactctagacaacaagatccatgagacaatagaaactatc
aatcagctgaagacccagcgggagttcatgctgagctttgcccgagaccctcagggtttc
atcaatgattggcttcagtcccagtgccgggacctcaagaccatgaccgatgtggtgggt
aacccagaggaagaacgccgagctgagttttacttccagccttgggctcaggaggccgtg
tgccgatacttctactccaaggtgcagcagagacgacaagaattagagcaagccctggga
atccgaaatacatag
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