Canis lupus familiaris (dog): 486879
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Entry
486879 CDS
T01007
Symbol
SORCS3
Name
(RefSeq) VPS10 domain-containing receptor SorCS3 isoform X1
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfa04131
]
486879 (SORCS3)
Membrane trafficking [BR:
cfa04131
]
Endocytosis
Others
Others
486879 (SORCS3)
Endosome - Lysosome transport
486879 (SORCS3)
Endosome - Golgi transport
486879 (SORCS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
486879
NCBI-ProteinID:
XP_013964528
Ensembl:
ENSCAFG00000010623
VGNC:
46661
UniProt:
A0A8P0SFJ3
LinkDB
All DBs
Position
28:17081570..17662475
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AA seq
1231 aa
AA seq
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MEAARTERPAGWPGAPLARTGLLLLSTWVLAGAEITWGATGGPGRPAAPASRPPAPLPLL
PRAAVSQWPEELATARGGSALGRRPGPELLPQPGGGGGGGGGGGGSVGRRQGGAGAPSPA
GAPWGPGIPAPGKAGGARRSRRAQPPSALERGDARAPALAGGAQGSRALARGLREEAKAP
RAGGAAAEELRLPSTSFALTGDSAHNQAMVHWSGHNSSVILILTKLYDFNLGSVTESSLW
RSTDYGTTYEKLNDKVGLKTVLSYLYVNPTNKRKIMLLSDPEMESSILISSDEGATYQKY
RLTFYIQSLLFHPRQEDWVLAYSLDQKLYSSMDFGRRWQLMHERITPNRFYWSVAGLDKE
ADLVHMEVRTADGYAHYLTCRIQECAETTRSGPFARSIDISSLVVQDEYIFIQVTTGGRA
SYYVSYRREAFAQIKLPKYSLPKDMHIISTDENQVFAAVQEWNQNDTYNLYISDTRGIYF
TLAMENIKSSRGLMGNIIIELYEVAGIRGIFLANKKVDDQVKTYITYNKGRDWRLLQAPD
VDLRGSPVHCLLPFCSLHLHLQISENPYSSGRISSKETAPGLVVATGNIGPELSYTDIGV
FISSDGGNTWRQIFDEEYNVWFLDWGGALVAMKHTPLPVRHLWVSFDEGHSWDKYGFTSV
PLFVDGALVEAGVETQIMTVFGHFSLRSEWQLVKVDYKSIFSRHCTKEDYQTWHLLNQGE
PCVMGERKIFKKRKPGAQCALGRDSSGTVVSEPCVCADWDFECDYGYERHGESQCVPAFW
YNPASPSKDCSLGQSYLNSTGYRRIVSNNCTDGLREKYTAKAQMCPGKAPRGLHVVTTDG
RLVAEQGHNATFIILMEEGDLQRTNIQLDFGDGIAVSYANFSPIEDGIRHVYKSAGIFQV
TAYAENNLGSDTAVLFLHVVCPVEHVHLRVPFVAIRNKEVNISAVVWPSQLGTLTYFWWF
GNSTKPLITLDSSISFTFLAEGTNTITVQVAAGNALIQDTKDIAVHEYFQSQLLSFSPNL
DYHNPDIPEWRQDIGNVIKRALVKVTGVPEDQILVAVFPGLPTSAELFILPPKNLTERRK
GNEEDLEQIVEMLFNALNQNLVQFELKPGVQVIVYVTQLTLAPLVDSSAGHSSSAMLMLL
SVVFVGLAVFLIYKFKRKIPWINIYAQVQHDKEQEMIGSVSQSENAPKITLSDFTEPEEL
LDKELDTRVIGGIATIANSESTKEIPNCTSV
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagcgcgcaccgagcgccccgcaggctggcccggggcgcccctcgcccggacg
gggctcctgctcctgtcgacgtgggtcctggccggcgccgagatcacttggggagcgacg
ggcggtcctgggcgcccggcagccccggcttcgcggccgccggcaccgcttcctctcctc
ccgcgggcggcggtaagccagtggccggaggagctggcgaccgcgcgcggaggctccgcg
ctggggcgccggcccgggccagagctgctgccccagccgggcggcggcggcggcggcggc
ggcggcggcggcggcagcgttggaaggaggcagggaggagccggggcgccgtcgcccgca
ggcgcgccgtggggacccggcatcccggctccgggcaaggctggcggcgcgaggaggagt
cgccgggcgcagccccccagcgccctggaacgcggggacgcccgggcccccgccctagcc
ggtggtgcccaaggaagccgcgctctggccaggggtctccgggaggaggcgaaggcgccg
cgggccgggggggcggcggccgaagagctccggctgcccagcacctcgttcgcgctgacc
ggggactcggcccacaatcaggccatggtgcactggtcgggacacaacagcagcgttata
cttatcctgacgaagctgtatgacttcaatctggggagcgtgacggagagctcgctgtgg
agatcaacggattatggcaccacctatgaaaagctaaatgacaaagtaggtttgaagact
gtcctcagttacctctacgtcaatcccaccaacaagaggaagatcatgcttcttagtgat
cctgaaatggagagcagcattttaatcagctctgacgagggcgccacctatcagaaatac
cggctcactttctacatccagagcttgctcttccatcccaggcaggaggactgggtgctg
gcctatagtctggatcagaagctctacagctccatggactttggaagacggtggcaactt
atgcacgaacgtatcacacccaacaggttttactggtcggtggctggactggataaggag
gcagacctggtgcacatggaggtgcggactgcagacggatatgctcactacctcacctgc
aggatccaagaatgcgccgagaccactcggagtgggccttttgcccgctccattgacatc
agttccctggttgttcaggatgaatatatcttcattcaggtaacaactggtggaagagcc
agctactacgtgtcctatcgaagagaagccttcgcccagataaagctacccaagtactcc
ctgcccaaggacatgcacatcatcagtaccgatgagaaccaagtgtttgcagccgttcaa
gaatggaaccagaatgacacgtacaatctgtacatctcagacacgcgtggcatctacttc
accttggccatggagaacattaagagtagccgaggtctaatgggaaacattattattgaa
ttgtatgaggtagcaggtatcagagggatattcttggccaataagaaggtggatgaccag
gtgaagacatatatcacttataacaaaggcagagattggcgcctacttcaagctccagat
gtggatctgcgtggaagtccggtacactgcctgctgcccttctgctccttacacctgcac
ttgcagatctctgaaaatccgtattcttcaggaagaatctccagcaaggagacagccccg
ggacttgtggtggctacaggcaatattggcccggagctctcatatactgatattggtgtg
ttcatctcttctgatgggggcaacacatggagacagatctttgatgaagagtacaatgtc
tggttcctagactggggtggcgccctcgtggccatgaaacacacacctctgccagtcagg
catttgtgggtgagttttgacgagggccactcctgggacaagtatggcttcacttcggtt
cctctctttgttgatggcgctctggtggaggcaggagtggagacccaaatcatgacagtt
tttggccacttcagcctccgttccgaatggcagttggtgaaagtggactacaaatctatc
ttcagtcggcactgcaccaaggaggactatcagacctggcacctgctcaatcagggggag
ccctgcgtcatgggagaaaggaaaatattcaagaaacgcaagccaggagctcagtgtgcc
ctgggccgagactcctcagggacagtggtctcagaaccatgtgtctgtgccgactgggac
tttgaatgtgattatggctatgagagacatggagagagccagtgtgtcccagctttctgg
tacaacccagcatccccgtcaaaggactgcagccttggtcaaagctaccttaacagcact
gggtaccggcggatcgtgtccaacaactgcacggacgggctgagggagaagtacacagcc
aaggcccagatgtgtccaggaaaagcccctcgaggcctccacgtggtgacgactgatggc
cgcctggtggcagagcaggggcataatgcaaccttcatcatcctcatggaggagggagat
ctccaaaggacaaacatccagcttgactttggggatggaattgcggtgtcctatgctaac
ttcagccccatcgaggatggcatcaggcacgtgtacaagagtgcggggatcttccaggtg
acggcctatgcagagaacaacctgggctcagacacagctgtcctcttcctgcacgtggtt
tgtccggtggagcatgttcatctccgagtgccatttgtcgccataagaaataaggaggtc
aacatcagtgcagttgtgtggcccagtcaactggggaccctaacctatttctggtggttc
ggcaatagcacaaagcctctaatcaccttggacagcagcatttccttcacattcctggct
gagggtaccaacaccatcactgtccaggtggctgctgggaatgcccttatccaggacaca
aaagacattgctgtgcatgagtatttccagtcccaacttttgtcattctctccaaacctg
gattaccataaccctgacattcctgagtggaggcaagatattggcaatgtcatcaagcga
gctctggttaaagtaaccggtgtcccagaagaccagatcctggtggccgtgttccctggc
ctccccacttcagcagagctcttcatcctgccccccaagaacttgacagagaggaggaaa
ggcaatgaagaggacctggaacaaattgtagagatgctgtttaatgctctaaaccaaaac
ttggttcagtttgagctgaagcccggggttcaagtcattgtgtatgtcacacagctgaca
ctagctccgttggtggactccagtgctgggcacagcagctcggccatgcttatgctcttg
tcagtggtatttgtcggcctggctgtgtttttgatctacaagtttaaaaggaaaatccct
tggattaacatctatgcccaagtccaacacgacaaggagcaggagatgattgggtcagta
agccaaagtgagaacgcccccaaaatcacactcagtgacttcaccgagcccgaggaactg
ctggacaaagagctggacacccgggtcataggaggcattgccaccattgcaaacagcgaa
agcacaaaggagatccccaactgcactagcgtttaa
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