Canis lupus familiaris (dog): 487172
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Entry
487172 CDS
T01007
Name
(RefSeq) protocadherin beta-5 isoform X1
KO
K16494
protocadherin beta
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cfa04515
]
487172
Cell adhesion molecules [BR:
cfa04515
]
Cadherins
Protocadherins
487172
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
487172
NCBI-ProteinID:
XP_022264341
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Position
2:33234100..33249834
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AA seq
795 aa
AA seq
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METALTKTPQKRQVIFLAILLLLWEAGSDAIRYSMPEETESGSFVANLAKDLGLRVGELT
TRGARIHYKGNRQLLQLDMETGNLLLYEKLDREVLCAATDPCILYFQLLLENPVQFFQAD
LQLTDINDHSPEFLDKEMLLKIPEIVQPGTIFPLKIAQDLDIGINTVQNYTISSNSHFHV
VTRNRGDGRKYPELLLDKALDREEQSEFRLTLTALDGGAPPRSGTTAVRIEVVDINDNAP
EFLQSLYEVQIPENSPLNSLVVAVSAQDLDEGAYGNVVYTLFQGDEVTQPFVIDEITGEI
RLTKALDFEATRHYNVEIAGTDGGGLSGKCTVAIEVVDVNDNAPELTMSTLASSTPENSP
ETVVAVFSVSDPDSGDNGRMVCSIQNDLPFLLKPTFKNFYTLVTERPLDRESQAEYNITI
TVSDLGTPRLKTQHNITVTVSDVNDNAPAFSQTTYTLRVRENNSPALHIGTVSATDRDAG
ANAQVTYSLLRPRDPHLPLASLVSINADNGQLFALRSLDYEALQAFEVRVGAADRGSPAL
SSQALVRVLVLDDNDNAPFVLYPLQNGSAPCTELVPRAAEAGYLVTKVVAVDGDSGQNAW
LSFQLLKATEPGLFGVWAHNGEVRTARLLSERDAVRHRLLVLVKDNGEPPLSASVTLHVL
LVDGFSQPYLPLPDVAAAEARADPLTVYLVIALASVSSLFLCSALAFVAVRLCRRSGAAS
GGGCAVPEGHFPGHLVDVSGAGTLSQSYRYEVCLAGGTGTSEFKFLKPVIPKFSPHGSGE
EIEESTTFRNSFGFN
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggagactgcgctaacaaaaacgccacagaaaaggcaagttatctttcttgctatattg
ttgcttttgtgggaggctggctctgacgcaattaggtattccatgccagaagaaacagaa
agtggctcctttgtggccaacctggcaaaagacctggggctcagggtgggggaactgact
actcggggcgcgcgaatccattacaaaggaaacagacagctcttgcagctggatatggaa
accgggaatttactgctatatgaaaaactagaccgggaggttctgtgcgcggcgaccgat
ccctgtatactgtatttccagttattactggaaaacccggtgcagttttttcaggctgat
ctgcagcttacagatataaatgaccattccccagagttcctagacaaggaaatgcttcta
aaaatcccagagatcgttcagccagggaccatatttcctttgaaaatagctcaggactta
gacataggtatcaatactgtgcagaactacacaatcagctcaaattcccattttcacgtt
gtcactcgtaatcgcggagatggcagaaaatacccagagctcctgctggacaaagcgctg
gatcgggaggagcagtctgagttcaggttaaccctcacggcgctggatggtggggctccg
cccaggtctgggaccacggcagtccgcattgaagtcgtggacatcaatgataatgcccct
gagttcttacagtcgctctatgaggtacagatccccgagaacagccccctaaactccttg
gttgtcgctgtctctgcccaagatttagatgaaggagcatatgggaatgttgtctacact
ctattccaaggcgatgaagttactcaaccatttgtaatagatgaaattacaggagaaatt
cgtctgacaaaggcattggattttgaggcaactcgacactataatgtggaaattgcaggc
acggacggcgggggtctttcaggaaaatgcaccgtagctatagaggttgtggatgtgaat
gacaacgcccctgaacttaccatgtctacgcttgcgagctctaccccagaaaactcacca
gagactgtagtggctgttttcagtgtttctgatccagactctggagacaatggtaggatg
gtttgctccatccagaacgatctcccctttctcctgaaacccacattcaagaacttttac
accctagttacggagagaccattggacagagagagccaggcggagtacaacatcacgatc
accgtcagtgacctggggacccccaggctgaaaacccagcacaacatcaccgtgacggtc
tccgacgtcaacgacaacgcccccgccttcagccagaccacctacaccctgcgcgtccgc
gagaacaacagccccgccctgcacatcggcaccgtgagcgccaccgacagagacgcgggc
gccaacgcccaggtcacctactcgctgctgcggccccgggacccgcacctgccgctcgcc
tcgctggtgtccatcaacgcggacaacgggcagctgttcgcgctcaggtccctggactac
gaggcgctgcaggccttcgaggtccgcgtgggcgcggccgaccgcggctcgcccgcgctg
agcagccaggcgctggtgcgcgtgctggtgctggacgacaacgacaacgcgcccttcgtg
ctgtacccgctgcagaacggctctgcgccctgcaccgagctggtgccgcgggcggccgag
gcgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaacgcctgg
ctgtcgttccagctgctcaaggccacggagcccgggctgttcggcgtgtgggcgcacaac
ggcgaggtgcgcacggcccggctgctgagcgagcgcgacgccgtcaggcacaggctgctg
gtgctggtcaaggacaatggcgagccgccgctgtcggccagcgtcacgctgcacgtgctg
ctggtggacggcttctcgcagccctacctgccgctgccggacgtggcggcggccgaggcc
cgggccgacccgctcaccgtctacctggtcatcgccttggcgtccgtgtcgtcgctcttc
ctgtgctcggcgctggcgttcgtggcggtgcggctgtgcaggaggagcggggcggcgtcg
gggggtggctgcgcggtgcccgagggccactttccgggccacctggtggacgtcagcggc
gcggggaccctgtcccagagctaccggtacgaggtgtgtctggcgggagggactgggacc
agcgagttcaaattcttgaagcctgttattcccaaattttcaccccatggctctggcgaa
gaaatagaggaaagcaccaccttccggaatagttttggattcaattag
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