Canis lupus familiaris (dog): 487177
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Entry
487177 CDS
T01007
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta-15
KO
K16494
protocadherin beta
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cfa04515
]
487177
Cell adhesion molecules [BR:
cfa04515
]
Cadherins
Protocadherins
487177
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
487177
NCBI-ProteinID:
XP_013963270
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Position
2:33297103..33300482
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AA seq
770 aa
AA seq
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MEAEEERFPRLRQVLLFVLLAHSCAEQEDYRIAEETESGSFVANLAKDIGLGVKELSWRR
ARIIFNDDKKHFQLNLQTGDLQINEKLDREELCGSTEPCVLQFQVLLEEPLEVYRYKLLL
SDINDNSPVFPESEMILKIMENTLPGTVFPLKNAQDLDVGINNIQNYTIYPNSHFHVLTR
NSGEGRKYPELVLDKALDREEQTELRLTLLAVDGGVPPKTGTALVLIDVLDINDNAPEFV
QPLYRAQIPENSPLGSLIVTVSARDLDTGTNGKVFYSFFYGDEEISRTFALNELTGEIKI
IRELDFEKIMSYELDIKASDGAGLSGKCTVIIEVVDINDNTPELTMASLTSSIPENSPET
TIALFSIQDRDSGENGRMVCSIQEDVPFTLKPSLENFYKLVTEGALDRESQAEYNITITV
SDLGTPRLKTQHNITVTVSDVNDNAPAFSQTTYTLRVRENNSPALHIGTVSATDRDAGAN
AQVTYSLLPPRDPHLPLASLVSINADNGQLFALRSLDYEALQAFEVRVGAADRGSPALSS
QALVRVLVLDDNDNAPFVLYPLQNGSAPCTELVPRAAEAGYLVTKVVAVDGDSGQNAWLS
FQLLKATEPGLFGVWAHNGEVRTARLLSERDAVRHRLLVLVKDNGEPPLSASVTLHVLLV
DGFSQPYLPLPDVAAAEARADPLTVYLVIALASVSSLFLCSALAFVAVRLCRRSGAASGG
GCGVPEGHFPGHLVDVSGAGTLSQSYQYEXCIREESGTREFKFLTSVVFI
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgaagaggagcgctttcctagactaaggcaagttcttctctttgttttgctg
gctcatagttgcgcagagcaggaagattatcgtattgcagaagaaacagagagtggttct
tttgtggccaatctagcaaaagacatagggctaggggtaaaagagctctcttggcggagg
gctcggatcatttttaacgatgacaaaaaacattttcagctgaaccttcagactggagat
ttgcaaataaatgagaaactggatcgggaggaactgtgtggctccactgagccctgtgta
ctgcaattccaagtgttactggaagaacctttggaggtatataggtataagcttttgctc
agtgacataaatgacaattcccctgtgttcccagaatcagaaatgattttgaaaatcatg
gaaaatactcttccagggactgtgtttcccctgaaaaacgcacaagatttggatgtaggc
atcaataacattcaaaactacaccatttatcccaactcccacttccacgttcttacgcgc
aatagcggtgaaggcagaaaatatccggaactggttttggacaaagccctagatcgagag
gagcagactgaacttaggttaactctcctggcagtagatggtggagttcctcccaaaact
gggactgccttggtcctcattgatgtcctggacatcaatgacaatgcccctgagtttgtg
cagccactctatcgtgcccagatcccggaaaacagtcccctgggatctcttattgtaact
gtttcagctagagatttagacacaggaacaaatggcaaagtattttattcatttttttat
ggcgatgaagagattagtaggacatttgcacttaatgaactcacaggagaaattaaaata
attagggaactagattttgaaaaaattatgtcatatgagctggatattaaggcctctgat
ggagcaggtctttctggcaaatgcactgtcataatagaggtggtggatataaatgacaac
accccagaactgactatggcttcacttacaagctcgatcccagaaaattcccctgagacc
accatagctcttttcagtattcaagaccgagactccggggaaaatgggaggatggtttgc
tccatccaggaagatgttccgttcactctaaaaccttcccttgagaatttctacaagcta
gtaacagaaggagcgctggacagagagagccaggcggagtacaacatcaccatcaccgtc
agtgacctggggacccccaggctgaaaacccagcacaacatcaccgtgacggtctccgac
gtcaacgacaacgcccccgccttcagccagaccacctacaccctgcgcgtccgcgagaac
aacagccccgccctgcacatcggcaccgtgagcgccaccgacagagacgcgggcgccaac
gcccaggtcacctactcgctgctgccgccccgggacccgcacctgccgctcgcctcgctg
gtgtccatcaacgcggacaacgggcagctgttcgcgctcaggtccctggactacgaggcg
ctgcaggccttcgaggtccgcgtgggcgcggccgaccgcggctcgcccgcgctgagcagc
caggcgctggtgcgcgtgctggtgctggacgacaacgacaacgcgcccttcgtgctgtac
ccgctgcagaacggctctgcgccctgcaccgagctggtgccgcgggcggccgaggcgggc
tacctggtgaccaaggtggtggcggtggacggcgactcgggccagaacgcctggctgtcg
ttccagctgctcaaggccacggagcccgggctgttcggcgtgtgggcgcacaacggcgag
gtgcgcacggcccggctgctgagcgagcgcgacgccgtcaggcacaggctgctggtgctg
gtcaaggacaatggcgagccgccgctgtcggccagcgtcacgctgcacgtgctgctggtg
gacggcttctcgcagccctacctgccgctgccggacgtggcggcggccgaggcccgggcc
gacccgctcaccgtctacctggtcatcgccttggcgtccgtgtcgtcgctcttcctgtgc
tcggcgctggcgttcgtggcggtgcggctgtgcaggaggagcggggcggcgtcggggggt
ggctgcggggtgcccgagggccactttccgggccacctggtggacgtcagcggcgcgggg
accctgtcccagagctaccagtacgagnngtgtatcagagaagaatctgggaccagggaa
tttaagttcttgacgtctgttgtcttcatctaa
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