Canis lupus familiaris (dog): 487503
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Entry
487503 CDS
T01007
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X2
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04140
Autophagy - animal
cfa04142
Lysosome biogenesis
cfa04145
Phagocytosis
cfa04148
Efferocytosis
cfa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
487503 (VPS18)
04142 Lysosome biogenesis
487503 (VPS18)
04140 Autophagy - animal
487503 (VPS18)
04148 Efferocytosis
487503 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
487503 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfa04131
]
487503 (VPS18)
Membrane trafficking [BR:
cfa04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
487503 (VPS18)
Hops complex
487503 (VPS18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
zf-RING_5
zf-C3HC4_2
zf-RING_16
zf-ANAPC11
zf-RING_Vps41
zf-RING_2
KNOX2
zf-RING_UBOX
zf-C3H2C3
zf_RING_Vps8
zf-rbx1
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
487503
NCBI-ProteinID:
XP_022268400
Ensembl:
ENSCAFG00000009383
VGNC:
48279
LinkDB
All DBs
Position
30
Genome browser
AA seq
905 aa
AA seq
DB search
MSLGKDTLLRIDLGKANEPNHVELGRKDDAKVHKMFLDHTGSHLLIALSSTEVLYVNRNG
QKVRPLARWKGQLVESVGWNKALGSESSTGPILVGTAQGQIFEAELSASEGGLFGPAPDL
YFRPLYVLNEEGGPAPVCSLEAERGPDGRGFVIATTRQRLFQFIGRAAEGTEAQGFSGLF
AAYADHPPPFREFPSSLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGALDCGRPDSLLSE
ERVWEYPEGVGPGASPPLAIVLTQFHFLLLLVDRVEAVCTLTGQVVLRDHFLEKFGPLKH
MVKDSSTGHLWAYTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPDCLDTVLAR
EADFCFRQRRYLESARCYALTQSYFEEIALKFLEARQEEALAEFLQRKLASLKPAERTQA
TLLTTWLTELYLSRLGALQGDPEALNLYRETRERFRSFLSSPRHKEWLFASRASIHELLA
SHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSPILIRHIPR
QLVDAWIELGSRLDARQLIPALVNYSQGGEAQQVSQAIRYMEFCVNVLGETEQAIHNYLL
SLYARGQPASLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVLELYEEAVD
LALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASCPLLKIEDV
LPFFPDFVTIDHFKEAICSSLRAYNHHIQELQREMEEATASAQRIRRDLQELRGRYGAVE
PQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQRKLGAAPAP
TKGSARAKEAEAGAATAGPSREQLKADLDELVAAECVYCGELMIRSIDRPFIDPQRYEEE
HLSWL
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgggcaaggacacactactccgcattgacttgggcaaggcaaacgaacccaac
cacgtggagctggggcgcaaggatgatgccaaggttcacaagatgtttctggaccacact
ggctctcacctgctgattgctctgagcagcactgaggtcctctatgtgaaccgtaacgga
cagaaggtacggccactggcacggtggaaggggcagctggtggagagtgtgggctggaac
aaggcactgggcagtgagagcagcacaggccccatcctggtcggcactgcccaaggccag
atcttcgaagcagagctctctgccagtgagggtgggctcttcggccctgccccggatctc
tacttccgcccattgtatgttctgaatgaagaagggggtccagcacctgtgtgctccctt
gaggccgagcgaggccctgatggacgtggcttcgtgatcgccaccacccggcagcgcctc
ttccagttcataggccgagcagctgagggaactgaggcccagggcttctcggggctcttt
gctgcctacgctgaccacccacccccattccgtgagttccccagcagtctgggctacagt
gagttggccttctatacccccaaactgcgttctgcacctcgggcctttgcctggatgatg
ggggacggcgtgttgtatggagcattggactgtgggcgccccgattccctgctgagcgag
gagcgtgtctgggagtacccagagggggtaggtcctggggccagcccacccctggccatc
gtcctgacccagttccacttcctgctgctgctggttgaccgagtggaggcagtgtgcacc
ctgacggggcaggtggtgctgcgggatcacttcctggagaagtttgggccactgaagcac
atggtgaaggactcttccacaggccacctgtgggcctacactgagcgagccgtcttccgc
taccacgtacagcgggaggcccgagatgtctggcgcacctacctggacatgaaccgcttc
gacctggccaaagagtattgccgagagcggcctgactgcctggacactgtcctggcccga
gaggccgatttctgttttcgtcaacgccgttacctggagagcgcccgctgctatgccctg
actcagagctactttgaggaaatcgccctcaagttcttggaggcccgacaggaggaggct
ctagctgagttcctacagcgaaaactggccagtttgaagcctgctgagcgaacccaggcc
acactgcttaccacctggctgacagagctttacctgagccggctaggagcactacagggt
gatcctgaggccctgaacttataccgggaaacacgggagcgcttccggtccttcctcagc
agtccccgccacaaagagtggctctttgccagccgggcctccatccacgaactgctggcc
agccatggggacacggaacatatggtgtactttgccgtgatcatgcaggactatgagcgg
gtggtggcataccattgccagcacgaggcctatgaggaagccctggctgtgcttgctcgc
caccgtgacccccagctcttctataagttctcacccatcctcatccgtcacattcctcgc
cagctggtagatgcttggattgagctgggcagccgcctggacgcccggcagctcatccct
gccctggtgaactacagccagggtggtgaggcccagcaggtgagccaggccatccgctac
atggagttctgcgtgaatgtgctgggcgagactgagcaggctattcacaattacctgctg
tcgctctatgcccgaggccagcctgcctcactgctggcctaccttgagcaggcaggggcc
agcccacaccgtgtgcattacgacctcaagtatgcgctgcggctttgtgctgagcacggc
caccaccgtgcttgtgtccacgtctacaaggtcctagagctgtatgaggaggccgtggac
ttggccctgcaggtggatgtggacctggccaaacagtgtgccgacttgcctgaggaggac
gaggaactgcgtaagaaactgtggctgaagatcgctcggcacgtggtgcaagaggaggaa
gacgtgcagacagccatggcctgcctggccagctgccccctgctcaagattgaggatgtg
ctgcccttctttcctgacttcgtcaccatcgaccacttcaaggaggcgatctgcagctcg
ctcagggcctacaaccaccacatccaagagctgcagcgggagatggaggaggccacagcc
agtgcccagcgcatccggcgagacctacaggaactgcggggccggtacggggcagtggag
ccccaggacaagtgcgccacctgcgacttccccctgctcaaccggcctttttaccttttc
ctctgtggccacatgttccatgctgactgcctgctgcaggctgtgcggccgggcctgccc
gcctacaagcaggcccggctggaggagctgcagcggaagctgggagctgccccggcccct
accaagggctccgcccgtgccaaggaggccgaggcaggggcagccacagcagggcccagt
cgggagcagcttaaggctgacctggatgaactggtggcggctgagtgcgtgtactgtggg
gagctgatgatccgctccattgaccggcccttcattgacccccagcgctatgaggaggag
cacctcagttggctgtag
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