Canis lupus familiaris (dog): 487690
Help
Entry
487690 CDS
T01007
Symbol
ROBO1
Name
(RefSeq) roundabout homolog 1 isoform X5
KO
K06753
roundabout, axon guidance receptor 1
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
487690 (ROBO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cfa04515
]
487690 (ROBO1)
Cell adhesion molecules [BR:
cfa04515
]
Immunoglobulin superfamily
ROBO family
487690 (ROBO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Big_4
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
487690
NCBI-ProteinID:
XP_013965230
Ensembl:
ENSCAFG00000007903
VGNC:
45684
LinkDB
All DBs
Position
31:7536253..8593279
Genome browser
AA seq
1615 aa
AA seq
DB search
MIAEPARLYLFGLLCLCSGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTI
EWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSH
NASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERIT
IRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSA
EFKCEARGDPVPTVRWRKDDGELPKSRYEIRDDHTLKIRKVMAGDMGSYTCVAENMVGKA
EASATLTVQVGSEPPHFVVKPRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSY
QPPQSTSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPV
IRQGPVNQTVAVDGTLVLSCVATGSPMPTILWRKDGVLVSTQDSRIKQLETGVLQIRYAK
LGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNT
VTLSWQPNLNSGATPTSYIIEAFSHASGSSWQTVAENVKTETFAIKGLKPNAIYLFLVRA
ANAYGISDPSQISDPVKTQDVPPTSQGVDHKQVQRELGNVVLHLHNPTILSSSSIEVHWT
VDQQSQYIQGYKILYRPSGGNHGESEWLVFEVRTPTKNSVVIPDLKKGVNYEIKARPFFN
EFQGADSEIKFAKTLEEAPSAPPQSVTVSKNDGNGTAILVSWQPPPEDTQNGMVQEYKVW
CLGNETRYHINKTVDGSTFSVVIPSLVPGIRYSVEVAASTGAGAGVKSEPQFIQLDSHGN
PVSPEDQVSLAQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIR
KVPSFTFTPTVTYQRGGEAVSSGGRPGLLNISEPATQPWLADTWPNTGNNHNDCSINCCT
AGNGNSDNNLTTYSRPADCIANYNNQLDNKQTNLMLPESTVYGDVDLSNKINEMKTFNSP
NLKDGRFVNPSGQPTPYATTQLIQSNLSNNMNNGSGDSSEKHWKPPGQQKQEVPPVQYNI
MEQNKLNKDYRANDTVPPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPK
QGGMNWADLLPPPPAHPPPHSNSEEYNISVDESYDQEMPCPVPPARMYLQQNELEEEEDE
RGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCPEEIGHMQHQPDRRRQPV
SPPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPA
SSVGDLESSVTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGL
KVARRQMQDAAGRRHFHASQCPRPTSPVSTDSNMSAAVMQKARPAKKQKHQPGHLRREVY
TDDLPPPPVPPPAIKSPTVQSKAQLEVRPVMVPKLPSIEARTDRSSDRKVGSYKGREVLD
GRQVADMRTNPGDTREAQEQQNDGKGRVNKAAKRDLPPAKTHLIQEDILPYCRPTFPTSN
NPRDPSSSSSMSSRGSGSRQREQANVGRRNIAEMQVLGGYERGEDNNEELEETES
NT seq
4848 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcggagcccgcccgcctgtacctcttcggattgctctgtctctgctcaggctcc
cgtctccgtcaggaagattttccacctcgtattgttgaacacccttcagacctaattgtg
tcaaaaggagaacctgcaactctgaactgtaaagctgaaggccgccccacgcccaccatt
gaatggtacaaaggtggggagagagtggagacagacaaagatgaccctcgctcacaccga
atgttgctgccaagtggatctttatttttcttacgtatagtacatggacgaaaaagtagg
cctgatgaaggggtctacgtctgtgtggcacggaattacctcggagaggctgtgagccat
aatgcatcgctggaggtggctatactacgggatgacttcagacaaaatccttctgatgtc
atggtggcagtgggggaacctgctgtgatggaatgccaacccccacgaggccatcctgaa
cccaccatttcgtggaagaaagatggctctccactggatgataaagatgaaagaataact
atacgaggtggaaagctcatgattacttacacccgcaaaagtgatgctggcaaatatgtt
tgtgttggtaccaacatggttggggaacgtgagagtgaagtagcagagctaactgtcttg
gagagaccatcatttgtgaagagacctagtaacttggctgtaactgtggatgacagtgca
gaatttaaatgtgaggctcgaggtgaccctgtgcctacggtacgatggaggaaagacgat
ggagaactgcccaaatccagatacgaaatcagagatgatcatactttgaagattcggaaa
gtgatggctggtgacatggggtcatatacttgtgttgcagaaaatatggttggaaaagct
gaagcatcagctactctgactgtccaagttgggtctgaacctccacattttgttgtgaaa
cctcgtgaccaggttgttgccttggggcgaactgtaacatttcagtgtgaagcaaccgga
aatcctcaaccagctattttttggagaagagaggggagtcagaatctgcttttctcatat
cagccgccacagtcaactagccgcttttccgtctcccagactggtgatctcactattact
aatgtccagcggtctgatgttggttattatatctgccagactttaaatgttgccggaagt
atcatcacaaaagcatatttggaagttactgatgtgattgcagaccggcctcccccagtc
attcgacaaggtcctgtgaatcagactgtagcagtggatggtactttagtgctcagctgt
gtggccacaggcagtccaatgcccacgattctctggagaaaggatggagtccttgtttca
acccaagattctagaatcaaacagctggagacgggagtgctgcagatccgatacgctaag
ctgggtgacacaggtcggtacacctgcattgcatcaacccccagtggtgaagcaacatgg
agtgcttacattgaagtccaagaatttggagttccagttcagcctccacgacccaccgac
ccaaatttaatccctagtgccccctcaaaacctgaagttacagatgtcagcagaaataca
gtaacgttgtcatggcaaccaaatttgaattcaggtgcaactccaacatcttatattata
gaagccttcagccatgcatctggtagcagctggcagaccgtagcagagaatgtgaaaaca
gaaacatttgccattaaaggactcaaacctaatgcaatttaccttttccttgtgagggca
gcaaatgcctatggaattagtgatccaagccagatatcagatccagtgaaaacacaagat
gttcccccaacaagtcagggagtagatcacaagcaggtccagagagaattgggaaacgtc
gtactgcaccttcacaaccccaccatcctctcatcctcttccatcgaagtgcactggaca
gtggaccaacaatctcagtatattcaaggatataaaattctttatcggccatctggaggc
aaccatggtgaatcggagtggttagtttttgaagtgaggactccaaccaaaaatagcgtg
gttatccctgatctcaaaaagggagtcaactatgaaattaaggctcgtcctttttttaat
gaatttcaaggagcagatagtgaaattaaatttgccaaaaccttagaagaagcacccagt
gccccaccccaaagtgtaaccgtatcaaagaatgatggaaatggaactgcaattcttgtt
agttggcagccacctccagaagacactcaaaatggaatggtccaagagtataaggtttgg
tgtctgggcaatgaaactcgttatcacataaacaagacggtggatggttccaccttttct
gtggtcattccttctctggttcctgggatccgatacagcgtagaagtagcagccagcacg
ggagctggagctggggtgaagagcgagccacagttcatccagttagattctcatggaaac
cccgtgtcacctgaagaccaagtcagccttgctcagcagatctcagatgttgtgaagcag
ccagcgttcattgcgggaatcggggccgcctgctggatcatcctcatggtctttagcatc
tggctctatcgacaccggaagaagagaaatggactgactagtacttatgcgggtatcaga
aaagtcccgtcttttaccttcacaccaacagtaacttatcagagaggaggtgaagctgtg
agcagtggagggaggccaggacttctgaacatcagcgaacctgccacacagccctggctg
gcagacacgtggcccaatactggcaacaatcacaatgactgctctatcaattgctgtacg
gcaggcaatggtaacagtgataacaacctgaccacctacagtcgcccagccgattgtata
gcaaattataacaaccaactggataacaaacaaacaaatctgatgctccctgagtcaact
gtttatggtgatgtggaccttagtaacaaaatcaatgagatgaaaaccttcaatagccca
aatctgaaggatgggcgttttgtcaatccatcagggcagcccactccttatgccaccacc
cagctcatccagtcaaacctcagcaacaacatgaacaatggcagcggggactccagcgag
aagcactggaaacctcccggccagcagaaacaagaagtgccaccagttcagtataacatc
atggagcaaaacaaactgaacaaagattatcgagcaaatgacacagttcctccaactatc
ccatacaaccaatcatatgaccagaatacaggaggatcctacaacagttcagaccggggc
agtagtacatctgggagtcaagggcacaagaaaggggcacggacacccaaagtaccaaaa
caaggtggcatgaactgggcagacctgcttcctcctcccccagcgcatcctcctcctcat
agcaatagtgaagagtacaatatttctgtagatgaaagctatgaccaagaaatgccatgt
cccgtgccaccagcaaggatgtatttgcaacagaatgaactagaagaggaggaagatgag
cgaggccccactccccctgtgcggggagcagcttcttctccagctgctgtgtcttatagc
catcagtccactgctactctgaccccctccccacaagaagaactccagcccatgttgcag
gactgcccggaggagattggccacatgcagcaccaacccgataggagacggcagcctgtg
agtcctcctccaccaccaagaccgatttccccaccacatacctatggctacatttcagga
cctcttgtctcagatatggatacagatgcaccagaagaggaagaagatgaagcagacatg
gaagtggccaagatgcagaccagacggcttttgttacgtggccttgagcagacccctgcc
tccagtgtgggggaccttgaaagctctgtcactgggtccatgatcaatggctggggctca
gcctcagaggaggacaacatttccagtggacgctccagtgtgagttcttctgatggctcc
ttcttcactgatgctgattttgcccaggcagtggcagcagctgcagaatatgctggtctt
aaagtggcacgtcgtcagatgcaggatgctgctggtcgccgacattttcatgcatcccag
tgccctcgacccacaagtcctgtctctacagacagcaacatgagtgctgctgtaatgcag
aaggccagaccagccaagaagcaaaaacaccagccaggacatctgcgcagagaagtctac
acagatgatctaccacctcctccggtgccaccacctgctataaaatcacccactgtccaa
tccaaggcacagctggaggtgcgacctgttatggtgccaaaactcccttctatagaagca
agaacagaccgatcatcagatagaaaagtaggcagttacaaggggagagaagtactggat
ggaagacaggttgctgatatgagaaccaatccaggtgataccagagaagcacaggaacag
caaaatgatggaaaaggacgagtaaacaaggcagcaaaacgagaccttccaccagcaaag
actcacctcatccaagaggatatcctaccttactgtagacctacttttccgacatcaaat
aatcccagagatcctagttcttcaagctcaatgtcatcaagaggatcaggaagcagacaa
agagaacaagcaaatgtaggtcgaagaaatatcgcagaaatgcaagttcttggaggatat
gaaagaggagaagataataatgaagaattagaggaaactgaaagctga
DBGET
integrated database retrieval system