Canis lupus familiaris (dog): 487813
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Entry
487813 CDS
T01007
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X2
KO
K14308
nuclear pore complex protein Nup54
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03013
Nucleocytoplasmic transport
cfa05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
487813 (NUP54)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
487813 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfa03019
]
487813 (NUP54)
Messenger RNA biogenesis [BR:
cfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
487813 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
487813
NCBI-ProteinID:
XP_038318126
Ensembl:
ENSCAFG00000008595
VGNC:
44057
UniProt:
A0A8C0P0D0
A0A8I3Q2V2
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All DBs
Position
32:41100154..41131148
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AA seq
508 aa
AA seq
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MAFNFGAPSGTSGTAAAPAAPAGGFGGFGTTSTTAGSAFSFSAPANTGATGLFGGTQNKG
FGFGTGFGTTTGSSTGLGTGLGTGLGFGGFNTQQQQQQTTLGGLFSQPTQAPTQSNQLIN
TASALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTQENPFCRFKAVGYS
CMPNNKDEDGLLVLVFNKKETDIRSQQPQLVESLHKVLGGNQTLTVNVEGIKTLPDDQTE
VVIYVVERSPNGTSRRVPATTLYAHFEQTNIKTQLQQLGITLSMTRTELSPAQIKQLLQN
PPAGVDPIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDIS
ELQKNQTTTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQC
ELNAPTQFKGRLNELMSQIRMQNHFGAVKSEERYYIDADLLREIKQHLKQQQEGLSHLIS
IIKDDLEDIKLVEHGLNETIHMRGGVFS
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaacttcggggctccctcgggcacctctggcaccgccgcggcccccgcggcc
cccgcgggtgggtttggaggatttgggacaacatctacaacagcaggttctgctttcagc
ttttctgctccagctaacacaggcgctactggactctttggtggtactcagaacaaaggt
tttggatttggtactggttttggcacaacaactggaagtagtactggtttaggtactggt
ttgggaacaggactgggatttggaggatttaatacacagcagcagcaacagcaaactaca
ttaggtggtctcttcagtcagcccacacaagctcctacccagtccaatcaactgataaat
actgcaagtgctctttctgctccaacgctgttgggagatgagagagatgctattttagca
aaatggaatcagctgcaggccttttggggaacaggaaaaggatatttcaacaataacatc
ccaccagtggaattcacacaagaaaatcccttttgccgatttaaggcagtaggatatagt
tgtatgcccaataataaagatgaagatgggctactggttttagttttcaacaaaaaagaa
acagatattcgaagccagcaaccgcagttggtagaatcattgcataaagttttgggagga
aaccagacacttactgtaaatgtagagggtattaaaacattgccagatgatcagacagaa
gttgtcatttacgttgttgaacgctctccaaatggtacttcaagaagagttccagctaca
acactatatgcccattttgaacaaactaatataaaaacacagttgcagcaacttggtata
accctttctatgactagaactgaactttctcctgcacaaatcaaacaacttttacagaac
cctcctgctggtgttgatcccattatctgggaacaagccaaggtggataaccctgattct
gaaaagttaattcctgtacccatggtgggtttcaaagaacttcttcgaagactgaaggtt
caagatcagatgactaagcagcatcagaccagattagatattatatctgaagatattagt
gaattacagaagaatcaaactacaactatggccaaaattgcacaatataagaggaaactc
atggatctttcccatagaaccttacaggtcctaatcaaacaggaaattcaaaggaaaagt
gggtatgccatccaagctgatgaagagcaattgcgagttcagctagatacaattcagtgt
gagctgaatgcacctactcagtttaagggccgactaaatgaactgatgtcccaaatcagg
atgcagaatcattttggagcggtcaaatcggaggaaagatattacatagatgcagatctg
ttacgagaaatcaagcagcatttgaaacaacaacaggaaggccttagccacttgattagt
atcataaaagatgacctagaagatataaagttggtagaacatggattgaatgaaaccatc
cacatgagaggtggtgtctttagttga
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