Canis lupus familiaris (dog): 488562
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Entry
488562 CDS
T01007
Symbol
SOX13
Name
(RefSeq) transcription factor SOX-13 isoform X4
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfa03000
]
488562 (SOX13)
Transcription factors [BR:
cfa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
488562 (SOX13)
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Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_WDHD1
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
488562
NCBI-ProteinID:
XP_038320110
Ensembl:
ENSCAFG00000009614
VGNC:
46674
UniProt:
A0A8P0NYV9
A0A8I3PHZ9
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All DBs
Position
38:798529..815690
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AA seq
618 aa
AA seq
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MLRMSMRSPGSALLAPDGVGTMVNCTVKSEGKKEPCHEALQGSAAGAEPQLGDPARAPQD
GADPQAPAQDCSSPESNGSPEPKRPGGSEAASGSQEKLDFNQNLKEVVPAIEKLLSSDWK
ERFLGRSSVEAKDVKGTQESLAEKELQLLVMIHQLSTLRDQLLTAHSEQKNMAAMLFEKQ
QQQMELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFPPSHQPLPVTPD
SQLALPIQPIPCKPVEYPLPLLHSPPAPVVKRPGAMAAHPPLQEPSQPLNLTAKPKAPEL
PNASSSPSLKMNNCGTRPPSHGAPTRDLQASPPSLPLGFLGEGDAVTKAIQDARQLLHGH
GGALESSPNAPFRKDLISLDTSPAKERLEEGCVHPLEEAMLGCDMDGSRHFPESRNSSHI
KRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQH
LEKYPDYKYKPRPKRTCIVEGKRLRVGEYKALMRTRRQDARQSYVTPPQAGQLQMSSSDV
LYPRVAGMPLAQPLVEHYVPRSLDPNMPVIVNTCSLREEGEATEDRHSVAEGELYRYSED
EDSEGEEKSDGELVVLTD
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgctcaggatgtccatgaggagccctggctctgccctgctggccccagatggcgttggc
accatggtgaactgcactgtcaagtcagaagggaagaaggagccctgccatgaggccctc
cagggctcagccgctggagctgaaccccagctcggagacccagcccgggctccccaggat
ggcgctgacccccaagctccagcccaggactgcagctccccagagagcaatgggtccccg
gaacccaagagaccggggggttctgaggctgcttctggaagccaggagaagctagacttc
aaccaaaatttaaaagaagttgtgcctgccatcgagaagctgctgtccagtgactggaag
gagaggtttctgggaaggagttctgtggaagccaaagatgtcaaagggacccaggagagc
ctggcagagaaggagctccagctgctggtcatgatccaccaactgtccacgctgcgggat
cagctcctgaccgcgcactcagagcagaagaacatggccgcaatgctgtttgagaagcag
caacagcagatggagctggcccgccagcagcaggagcagatcgccaaacagcaacagcag
ctgattcagcagcaacataagatcaacctcctccagcagcagatccagcaggtcaacatg
ccttatgtcatgatcccagccttccctccgagccaccagcctctgcctgtcacccctgat
tcccagctggccttgcctatccagcccatcccctgtaaaccagtggagtaccccctgccg
ctgctgcacagcccccctgcccctgtggtgaagaggcccggggccatggctgcacacccc
cctctgcaggagccctcccagcctctgaacctcacggccaagcccaaggccccggagctg
cccaatgcctccagctcccccagcctgaagatgaataactgtggaacccgcccccccagc
cacggggcccccacgcgggacctgcaggccagcccgcccagcctgcccctaggcttcctt
ggcgaaggggatgctgtcaccaaagcaattcaggatgctcggcagctgctgcatggccac
ggcggcgctttagagagctcccccaacgcccccttccgcaaggacctcatcagcctggac
acgtccccggccaaggagcggctggaggagggttgtgtgcatcccctcgaagaagccatg
ttgggctgcgacatggatggctcccgccacttcccggagtcccgcaacagcagccacatc
aagaggcccatgaatgccttcatggtgtgggccaaggacgagcgaaggaagatcctccag
gctttcccagacatgcacaactctagcatcagcaagatccttggctcccgctggaagtcc
atgaccaaccaggagaagcagccctactacgaggagcaggcgaggctgagccggcagcat
ctggagaagtatcccgactataagtacaagccgaggcccaagcgcacctgcattgtggaa
ggcaagcggctgcgggtgggcgagtacaaagccctgatgaggacccggcgccaggatgcc
cgccagagctatgtgacccccccacaggctggccagctgcaaatgagctcctctgacgtc
ctgtaccctcgggtggcaggcatgcccctggctcagcccctggtggagcactacgtgccc
cggagcctggaccccaacatgcctgtcatcgtcaacacttgtagcctcagggaggagggg
gaggccacagaagataggcactcggtggcggagggcgagctgtaccgctacagcgaggac
gaggactcagagggcgaggagaagagcgacggggagctggtggtgctcacggactga
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