Canis lupus familiaris (dog): 488760
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Entry
488760 CDS
T01007
Symbol
TMC3
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
488760 (TMC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cfa02000
]
488760 (TMC3)
03037 Cilium and associated proteins [BR:
cfa03037
]
488760 (TMC3)
Transporters [BR:
cfa02000
]
Other transporters
Pores ion channels [TC:
1
]
488760 (TMC3)
Cilium and associated proteins [BR:
cfa03037
]
Other cilia and associated proteins
Stereociliary proteins
488760 (TMC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
DUF2254
Chordopox_A33R
TMEM43
Motif
Other DBs
NCBI-GeneID:
488760
NCBI-ProteinID:
XP_038339150
Ensembl:
ENSCAFG00000013775
VGNC:
47422
LinkDB
All DBs
Position
3:59067043..59106454
Genome browser
AA seq
1049 aa
AA seq
DB search
MKPSKASQRYRSIRRNTSQHYFYQESLLLRRAKEIVLKFEGRLTRTRGYQAAGAELWRKF
ARLACNFMVIFIPWEMRIKKIESHFGSGVASYFIFLRWLFGINIVLTIMTGAFIVIPELI
AGQPFGSTASKTIPKEHVASAQDLDTVWSLGGYLQYSVLFYGYYGRERRIGRAGYRLPLA
YFLVGMAVFAYSFIILLKKMAKNSRTSLASASNENYTFCWRVFCAWDYLIGNPEAAESKT
AAIVNSIREAILEEQEKKKSKNLAVTICLRVVANILVLLSLAGSIYLIYFVVDRSQKLEQ
SKKELTLWEKNEVSVVVSLVTMLAPSAFDLIAALEMYHPRTTLRFQLARVLVLYLGNLYS
LIIALLDKVNSMNTEETATKNNTSHWIESTIFFATRTVTEEDKWSTPGPEIGLGRNSTWG
PDETSVPAYTLPLLEANKTTIYTQNPQDQCWETYVGQEMLKLSIIDMLFTVASVLLIDFF
RGLFVRYLSDYWCWDLESKFPEYGEFKIAENVLHLVYNQGMIWMGAFFSPCLPAFNVLKL
IGLMYLRSWAVLTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTIFAIVRYKPSLNCG
PFSGQEKMYDIVSETIEKDFPAWFGSVVGYLSSPVVILPGVLLLFMLIYYLQSIARSLKL
SNQQLRMQIQNARSEDKKKVAQMVEARIQTQEESSKRLPKDGDPSSQTSSAHSATPQSNG
TVVSLDTSNSKSGRVGTVGQRTPPSPQSGLSSPSWSLPGTSKSRPEQDTHRHLRGWCAST
GDQHQDTSCSPTPLAKHTKDIHAEPLFRKDFQQINAALCGPGLSTSVPHGPRSHAPRYYI
INERDSRKNIHPTLWPERHFRMDALGDIVERYPRNTRRSVSRAPPQDRSPQLSEEEEDAP
EREVVEWSFHPQPLTGLQGAFYVGKKSESQSLGPEHQGRMYYTSWNYGSEAPLDRLTYVQ
KKPRSRNFQYAQRPPKLRGQPKVKPSLAESDSTSAASSSDQQSGSKDQYLRATHSQGKFP
KSLCELGRRKAMSRQELIADLNDLTCSNV
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccctcaaaggcatcccagcgctacagaagcatccggagaaacaccagccagcac
tatttctaccaggagtccctgctgctcaggcgagcgaaggagatcgtgctgaagtttgaa
gggaggctgacccggacccgtggctaccaagcagcaggtgcagagctctggcggaagttt
gctcgtctggcctgtaacttcatggtcatcttcattccctgggagatgaggatcaagaaa
atcgagagtcactttggatctggggttgcttcctacttcatattcttgagatggttattt
ggaattaatattgtgctcacgattatgacaggtgcttttattgtcattccagagctcatt
gcaggccagccctttggaagcacagccagcaagaccatccccaaggagcacgtggcttcg
gctcaagacctggacacagtctggtccctggggggttacctgcagtactcagtgctcttc
tacggctattatggcagggagcgaaggattgggagagctggctaccggctgcccttggcc
tattttctggtggggatggccgtgtttgcttacagcttcatcatcctcttgaaaaagatg
gctaagaactcccggaccagcctggccagtgcctccaatgagaactacaccttctgctgg
cgggtcttctgtgcctgggattacctcattggcaacccggaggctgcggagagcaaaacg
gctgccatcgtgaacagcatcagggaggccatcctggaagaacaggaaaagaagaaaagc
aaaaacctggcagtgaccatctgcctgagggttgttgccaacatcctggtacttctctcg
ctcgctgggagcatctatctcatctacttcgtggtagaccggtcccagaagctggagcag
tcgaagaaggagctgacgctctgggaaaagaatgaggtgagcgtggtggtctccctcgtc
accatgctagcaccatcggcctttgacctcatcgccgccctggagatgtaccacccacga
accacactgcgcttccagctggcaagggtccttgtgctctacctggggaacctctacagc
ctgatcattgctctcttggacaaagttaacagcatgaacactgaggaaactgccaccaaa
aataacacaagccactggatagagtctaccatcttctttgccaccaggacggtcactgaa
gaagataaatggtccacacctgggcctgagatagggctcgggagaaacagcacgtggggc
ccagacgagaccagtgttccagcttacaccttgcctctcttggaggccaacaagaccacc
atctacacccagaatccacaagaccagtgctgggagacctacgtagggcaggagatgctg
aagctttccatcattgacatgctcttcaccgtggccagcgtcctgctcatagacttcttc
cggggactttttgtccggtacttaagtgactactggtgttgggacctggaaagcaagttt
cctgaatatggggaattcaaaatagcagagaacgtgttacatttagtctacaaccaaggg
atgatttggatgggggccttcttctccccatgcctccctgcattcaacgtcctcaaactg
attgggctcatgtacctgaggagctgggcggtgctgacttgcaacgtgcctcaccagcaa
gtgtttcgagcctccagatccaacaacttctacctggcgatgctcctgtttatgctcttc
ttgtgcatgttgccaaccatttttgctattgttcggtacaagccatctctaaattgcggc
ccattcagtggacaggagaaaatgtatgacatcgtgtcagaaaccatcgagaaggacttc
cccgcttggtttggctctgtagtggggtacctcagcagccccgtggtcatcctgccgggt
gtgttgctgcttttcatgctcatctattaccttcagagcatcgcgaggtccttaaagctc
agcaaccagcagctccgaatgcagatccaaaatgccagatctgaagataagaaaaaggtc
gctcaaatggtagaagcccggatccaaacccaagaggaaagcagcaagaggcttcccaag
gacggtgaccccagcagccagacatcctcagctcactcagcgacgccccaaagcaatggc
actgtggtcagtttggacacatccaacagcaagagtggcagggtagggactgttggccag
cgcacgcccccgagtccccagtcaggcctcagcagtcccagctggtctcttcctggcacc
tccaaatccaggccagagcaggacactcacaggcatctccgtggttggtgcgccagcaca
ggggaccagcaccaggacacatcctgctcgcccacgccgctggcaaagcacaccaaagac
atccacgcagagcctcttttccgaaaagactttcagcagatcaacgctgctctttgtggt
ccagggctctccacctcagtgccacacggtcctaggtcccatgcccccagatactacatc
attaatgaacgagactctcgcaaaaatatccacccaactctctggccagaaagacatttc
aggatggatgccttaggggacatcgttgagaggtaccccaggaacacgcgacgcagtgtg
tcccgggcccccccgcaggatcgctctccacagctgagtgaagaagaggaagatgccccg
gagagagaggtagtcgaatggtctttccacccacagcccctgacaggtctccaaggggcc
ttttatgttggcaaaaagtcagagagtcagagcctgggccccgagcaccagggaaggatg
tactacacgtcctggaactatggctctgaggctccacttgacaggctgacgtatgtgcag
aaaaagccacgttcccggaatttccagtatgcacaacgccccccaaagctccgaggccag
cccaaggttaagccatccctcgcagaatctgattccacgtcggcagcgtccagcagcgac
cagcagagcggcagcaaggaccagtacctgcgggccacccacagccagggcaaattccca
aagtctttgtgcgagctgggcaggaggaaggccatgtccaggcaggagctgattgctgat
ctgaacgacctgacttgttccaacgtctag
DBGET
integrated database retrieval system
