Canis lupus familiaris (dog): 488843
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Entry
488843 CDS
T01007
Symbol
PCDH7
Name
(RefSeq) protocadherin-7 isoform X5
KO
K16498
protocadherin delta 1
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
488843 (PCDH7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cfa01009
]
488843 (PCDH7)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cfa04515
]
488843 (PCDH7)
Protein phosphatases and associated proteins [BR:
cfa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
488843 (PCDH7)
Cell adhesion molecules [BR:
cfa04515
]
Cadherins
Protocadherins
488843 (PCDH7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Mid2
TMEM154
Cadherin_pro
LYRIC
KIAA1549
MLANA
EphA2_TM
Adeno_E3_CR2
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
488843
NCBI-ProteinID:
XP_022272967
Ensembl:
ENSCAFG00000016342
VGNC:
53195
LinkDB
All DBs
Position
3:complement(82489246..82905089)
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AA seq
1260 aa
AA seq
DB search
MLRMRTAGWARGWCLGCCLLLPLSLSLAAAKQLLRYRLAEEGPADVRIGNVASDLGIVTG
SGEVTFSLESGSEYLKIDNLTGELSTSERRIDREKLPQCQMIFDENECFLDFEVSVIGPS
QSWVDLFEGRVIVLDINDNTPTFPSPVLTLTVEENRPVGTLYLLPTATDRDFGRNGIERY
ELLQEPGGGGGGGGGGGGEGRRAGPGDSAPYPGGGGNGASGGGPGGSRRRPDAPEGGGGG
GGGGGGPNPGPGGRSSVFELQVADTPDGEKQPQLIVKGALDREQRDSYELTLRVRDGGDP
PRSSQAILRVLITDVNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYV
FGAATESVRRLLRLDETSGWLSVLHRIDREEVNQLRFTVMARDRGQPPKTDKATVVLNIK
DENDNVPSIEIRKIGRIPLKDGVANVAEDVLVDTPIALVQVSDRDQGENGVVTCTVVGDV
PFQLKPASDTEGDQNKKKYFLHTSAPLDYETTREFNVVIVAVDSGSPSLSSNNSLVVKVG
DTNDNPPVFGQSVVEVYFPENNVPGERVATVLATDADSGKNAEIAYSLDSAVMGTFAIDP
DSGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADRNDNDPKFMQDVFTF
YVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDREHQT
TYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTVTLPRNISYTLLPPSSNVRTVVATV
LATDSDDGINADLNYSIVGGNPFKLFEIDPTSGVVSLVGKLTQKHYGLHRLVVQVNDSGQ
PSQSTTTLVHVFVNESVSNATVIDSQIARSLHTPLTQDIAGDPSYEISKQRLSIVIGVVA
GIMTVILIILIVVMARYCRSKNKNGYEAGKKDHEDFFTPQQHDKSKKPKKDKKNKKSKQP
LYSSIVTVEASKPNGQRYDSVNEKLSDSPSMGRYRSVNGGPGSPDLARHYKSSSPLPTVQ
LHPQSPTAGKKHQAVQDLPPANTFVGAGDNISIGSDHCSEYSCQTNNKYSKQGTVIALGY
LDNPGKSHFKPFRRVTFSVVSQPQDPHQGSLQSCYDSGLEESETPSSAAPFQGTADSRPL
PDVALTGKCTRECDEYGHSDSCWMPVRTSPERKKSQPKLSTFMPVDERGSQEKLANGEAA
IMGDRNRNLLNKKLTSSYETFSAASFSKNEEANPEDIPLTKTGEYKPSPVNTLTRREVYL
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggatgcggaccgcggggtgggcgcgcggctggtgcctgggttgctgcctcctc
ttgccgctgtcgctcagcctggcggccgccaagcaactcctccggtaccggctggccgag
gagggcccggcggacgtccgcatcggcaacgtcgcctcggacctgggcatcgtgacgggc
tcgggcgaggtgactttcagcctcgagtcgggctcggagtacctgaagatcgacaacctc
acgggcgagctgagcaccagcgagcggcgcatcgaccgcgagaagctgccccagtgtcag
atgatcttcgacgagaacgagtgcttcctggacttcgaggtgtcggtgatcgggccctcg
cagagctgggtggacctgttcgagggtcgggtcatcgtgctcgacatcaacgacaacacg
cccaccttcccgtcgcccgtgctcacgctcacggtggaggagaaccggccggtgggcacg
ctctacctgctgcccaccgccaccgaccgtgacttcggccgcaacggcatcgagcgctac
gagctgctccaggagcccgggggcggcggcggcggcggcggcggcggcggcggcgagggc
cggcgagccgggcctggcgacagcgccccctaccccgggggcggcgggaacggcgcgagc
ggcggcggccccgggggctccaggaggcgcccggacgccccggagggcggcggcggcggc
ggcggcggcggcggcggccccaaccccggccccggcggccgcagcagcgtgttcgagctg
caggtggccgacaccccggatggcgagaagcagccgcagctgatcgtgaagggggcgctg
gaccgcgagcagcgcgactcctacgagctgaccctgcgggtgcgggacggcggcgacccg
ccgcgctcctcccaggccatcctgcgggtgctcatcaccgacgtgaacgacaacagcccc
cgcttcgagaagagcgtgtacgaggccgacctggcggagaacagcgcccccggcaccccc
atcctgcagctgcgagccgccgacctggacgtgggggtcaacgggcagatcgagtacgtg
ttcggggcggccaccgagtcggtgcggcggctgctgcgcctcgacgagacgtccggctgg
ctcagcgtcctgcaccgcatcgaccgcgaggaggtgaaccagctgcgcttcaccgtcatg
gcccgcgaccgcgggcagccccccaagaccgacaaggccacggtggtgctcaacatcaag
gacgagaacgacaacgtgccgtccatcgagatccgcaagatcgggcgtatcccgctcaag
gacggggtggccaacgtggccgaggatgtgctggtcgacacccccatcgccctggtgcag
gtgtccgaccgcgaccaaggcgagaacggcgtggtcacctgcaccgtggtgggggacgtg
cccttccagctcaagccggccagcgacacggagggcgaccagaacaagaaaaagtacttc
ctgcacacctcggcccccctggactacgagaccacccgggaattcaacgtggtcattgtg
gcggtggactcgggcagccccagcctctccagcaacaactccctggtcgtcaaggtcgga
gacaccaatgacaacccgcccgtcttcggccagtcggtggtggaggtctacttccccgag
aacaacgtccccggagagagggtggccacggtgctggcgaccgacgccgacagtgggaag
aacgcagagattgcctattctctggattccgccgtgatggggacctttgccatcgacccc
gattctggggacatcctggtcaacaccgtgctggaccgcgagcagacagacaggtacgag
tttaaagttaacgccaaagacaaaggcatcccagtgctgcagggcagcaccacggtgatc
gtgcaggtggccgacaggaatgacaatgaccctaagtttatgcaggacgtctttaccttt
tatgtgaaggaaaacttgcagcccaacagccctgtggggatggtcacggtgatggatgct
gacaaggggcgcaatgcagagatgagcctctacatagaggaaaacagtaacattttttcc
atcgaaaacgacacggggaccatttactccaccatgtccttcgaccgggagcaccagacc
acatacacgttcagggtcaaggctgtggatgggggagatcctcccaggtcggccacggcc
accgtctccctctttgtgatggacgagaacgacaacgctcccacagtcacccttcccaga
aacatttcctacactttactgccaccttcgagtaatgtcaggacagtggtagccaccgtg
ctggcaacggacagcgacgatggcatcaacgcagacctcaactacagcattgtgggaggg
aatcccttcaagctgtttgagattgatcccaccagcggtgtggtttccttggtggggaag
ctcacccaaaagcattacggcttgcacaggttggtggtgcaagtgaatgacagcgggcag
ccctcccagtccaccacgactctggtgcatgtgtttgtcaatgaaagtgtttccaacgcg
actgtgattgactcccagatagccagaagtttgcacaccccgctcacccaggatatagcc
ggtgacccaagttatgaaatcagcaaacagagactcagtattgtcattggggtggttgct
ggaattatgacagtgattctgatcatcctaattgtagtgatggcaaggtactgccggtcc
aaaaataaaaatgggtacgaagctggcaaaaaggaccacgaggacttttttacaccccag
cagcacgacaaatccaaaaagcctaaaaaggacaagaaaaacaaaaaatctaagcagcct
ctctacagcagcattgtcactgtggaagcttctaaaccaaatggacagaggtatgatagt
gtgaacgagaagctgtcagacagcccaagcatggggcgataccgatccgtgaatggtggg
cctggcagtcctgacctggccaggcattacaagtccagttctccgttgcctactgtccag
cttcacccccagtcaccaactgcaggaaaaaaacaccaggccgtacaagatctaccacca
gccaacacatttgtgggagcaggagacaacatctcaattggatcagatcactgctctgaa
tacagctgtcaaaccaataacaagtacagcaaacagggcactgtgattgcattgggctac
ttggataatccaggaaaatctcattttaagccatttcgtagagtgacgttttctgttgtg
agtcagcctcaggacccacatcaggggtcactgcagagttgctatgacagcgggctggag
gagtcagagacaccaagcagtgccgcaccattccaaggaactgcagattcaagacctctt
ccagatgtagccctgactgggaagtgtacccgtgagtgtgatgaatatggccactcagac
tcctgctggatgccagtccgcacttctccagagaggaagaagagccagcccaaactctcc
actttcatgcctgttgatgaacgaggaagccaggaaaagctggccaatggcgaggctgcc
atcatgggtgaccgcaacagaaacctcctgaacaaaaagttgacctcgtcctatgagacc
ttcagtgcagctagtttcagcaaaaatgaggaagccaaccctgaggatattccccttaca
aaaacgggggaatacaagccatctcctgtcaatactctcactagaagagaagtttacctg
tag
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integrated database retrieval system
