Canis lupus familiaris (dog): 488891
Help
Entry
488891 CDS
T01007
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfa03021
]
488891 (CHD1)
03036 Chromosome and associated proteins [BR:
cfa03036
]
488891 (CHD1)
Transcription machinery [BR:
cfa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
488891 (CHD1)
Chromosome and associated proteins [BR:
cfa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
488891 (CHD1)
SLIK complex
488891 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
DEAD
Motif
Other DBs
NCBI-GeneID:
488891
NCBI-ProteinID:
XP_038324986
Ensembl:
ENSCAFG00000007672
VGNC:
39199
LinkDB
All DBs
Position
3:12628640..12702491
Genome browser
AA seq
1799 aa
AA seq
DB search
MNGHSDEESVRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGS
QSESESDTSRENKVQAKPPKVDGAEFWKSSPSILAVQRSAMLKKQQQQQQQHPASSNSGS
EEDSSSSEDSDDSSNEVKRKKHKDEDWQMSGSGSPSQSGSDSESEEEERDKSSCDETESD
YEPKNKVKSRKPQNRSKAKNGKKILGQKKRQIDSSEEEDDEEDYDNDKRSSRRQATVNVS
YKEDEEMKTDSDDLLEVCGEDVPQPEEEEFETIERFMDCRIGRKGATGATTTIYAVEADG
DPNAGFEKNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKR
WLKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSEC
SWEDGALISKKFQACIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHESLEL
RDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLST
LTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKA
FLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIM
PEKFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSAL
QKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQ
HLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGE
LRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRI
GQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFN
KEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEPGPLTVGDELLSQFKV
ANFSNMDEDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQIS
FNGSEGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKF
GGPLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDNSSGTERTGGRLGKVKGPT
FRISGVQVNAKLVISHEEELIPLHKSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDDSNL
LIGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLSRDLAKKE
AQRLSGAGGSKRRKARAKKNKAMKSIKVKEEMKSDSSPLPSEKSDEDDDKDEITSVKHPN
KKIKTERDSEERPEPDVFIKKESEEKREAKEKENKRELKREIKEKEDKKDIKEKDFKEKR
ENKVKEAIQKEKDIKEEKLNESKSESKERSKKSSVSDAPVHITASGEPVPISEESEELDQ
KTFSICKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQI
KQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQNNDQNSNLNAQVIRNPDVERLK
ENTNHDDSSRDSYSSDRHLSQYHDHHKDRHQGDSYKKSDSRKRPYSSFSNGKDHRDWDHY
KQESRYYSDREKHRKLDDHRSRDHRSNLEGSIKDRSHSDHRSHSDHRLHSDHRASSEYTH
HKSSRDYRYHSDWQMDHRASSSGPRSPLDQRSPYGSRSPFEHSIEHKSTPEHTWSSRKT
NT seq
5400 nt
NT seq
+upstream
nt +downstream
nt
atgaatggacacagtgatgaagaaagtgttagaaacagtagtggagaatcaagccagtcg
gatgatgattctgggtcagcttcaggctcgggatctggttcaagttctggaagcagtagt
gatggaagcagtagccagtcaggtagcagtgactctgactctggatctgaatccggcagt
cagtcagagtctgagtcagacacttcccgagaaaacaaagtccaagcaaaaccaccgaaa
gttgatggagctgagttttggaaatctagccccagtattctggctgttcagaggtcagca
atgctcaagaagcagcagcagcagcagcaacagcatccagcttcatccaatagtggatca
gaggaggattcctccagcagtgaagattctgatgactcatcgaatgaggtcaaaaggaaa
aagcataaagatgaagattggcaaatgtctgggtcaggatctccatctcagtctggttca
gattcagaatctgaagaagaagaaagagataaaagcagttgtgatgaaacagaatctgat
tatgagccaaaaaacaaagttaaaagcagaaaacctcaaaatagatctaaggcaaaaaat
gggaagaaaattcttggacaaaaaaagagacagattgattcatctgaggaggaagatgat
gaagaagattatgataatgataaaagaagttctcgtcgccaagcaactgtcaatgttagc
tataaagaagatgaagaaatgaaaacagattctgatgatctattggaagtctgtggagag
gatgttcctcaacctgaggaagaggaatttgaaacaatagaacgttttatggattgtcgg
attgggagaaaaggagctactggtgctactacaaccatctatgcagttgaagcagatggt
gacccaaatgcaggatttgagaaaaacaaggaaccaggagagatccagtatttaattaaa
tggaaaggatggtcccatatccacaatacttgggagacagaagaaacccttaagcagcag
aatgttagaggaatgaaaaaattggataattataagaaaaaagatcaggaaacaaaaaga
tggttgaaaaatgcttctccagaagatgtggaatattacaattgccagcaagaacttaca
gatgatctacataaacagtatcaaatagtggaacgaataattgctcattccaatcagaag
tcagcagctggttatcctgattattattgcaaatggcagggccttccatactcagaatgc
agctgggaagatggagctctaatttccaaaaagtttcaagcctgcatagatgagtatttt
agcaggaatcaatcaaaaaccactccttttaaagattgcaaagtattaaaacaaaggcca
agatttgtagccctaaagaagcagccgtcctatattggaggacatgaaagtttagaatta
agagattatcaactgaatggtttaaattggcttgctcactcttggtgcaaaggaaatagt
tgtatacttgctgatgaaatgggccttggaaaaacaatacagacgatctcatttctgaac
tatttgtttcacgaacatcaattatatggaccttttctgttagtagtaccactctccacc
cttacttcctggcaaagagaaattcagacatgggcttctcaaatgaatgctgtggtttat
ttaggtgacattaacagcagaaatatgatacggactcatgaatggatgcatccccagacc
aaacggttaaaatttaatatacttttaacaacttatgaaattttactgaaggataaggca
ttccttggaggtctaaactgggcgtttataggtgtagatgaagcgcatcgattgaagaat
gatgactctcttctgtataaaactttaatagactttaagtccaatcaccgtctccttatt
actggaactcctctacaaaactccctcaaagagctctggtctttgctacatttcattatg
ccagaaaagttttcttcctgggaagattttgaagaagaacatgggaaaggcagagaatat
ggttatgcaagcctccacaaggagcttgagccgtttctgttacgcagagttaaaaaagat
gtggaaaaatctcttcctgccaaagttgagcagattttaagaatggaaatgagtgcttta
cagaaacagtattacaaatggatattaactaggaattataaagccctcagcaaaggttcc
aagggcagtacctcaggctttttgaacattatgatggagctaaagaaatgttgtaaccat
tgctacctcattaaaccaccagataataatgaattctataataaacaggaggccttacaa
cacttaatccgtagtagcggaaaattgattcttcttgacaaactgttaattcgcctaaga
gaacgaggcaatagagttcttattttttcccaaatggtgcggatgttagatatacttgca
gaatatttgaaataccgtcaattcccctttcaaagattagatggatcaataaagggggag
ctgagaaaacaagctctagatcattttaatgctgaaggatcagaggatttctgctttttg
ctttccacaagagctggaggcctaggaattaatttagcctctgctgacactgttgttata
tttgattctgattggaatccacaaaatgatcttcaggcacaggctagagctcatcgaatt
gggcagaagaaacaggtgaatatttatcgtctggttacaaagggatcagttgaagaggat
atacttgaaagggccaaaaagaagatggttttagatcatcttgtgattcagagaatggac
acgacggggaagacagtactacatacaggttctgctccctcaagttccactcctttcaat
aaagaggaattatcagccattttaaagtttggtgctgaagaactttttaaggaacctgaa
ggagaagaacaagagccccaggaaatggatatagatgaaatcttgaagagagctgaaact
catgaaaatgaaccaggccctttaactgtaggagatgaattgctttcccagttcaaggtt
gccaacttttcaaatatggatgaggatgacattgagttggaaccagaaagaaattcaaag
aattgggaggaaataattccagaagatcaaagaagacgattagaagaggaagaaaggcaa
aaggaacttgaagaaatttatatgctcccgagaatgagaaactgtgcaaaacagattagt
tttaatggaagtgaagggaggcgcagtagaagtaggagatattctggatctgatagtgac
tcaatctcagaaaggaaaaggccaaagaaacgtggaagaccacggactattcctcgagag
aatatcaaaggatttagtgatgcagaaattcggcggtttatcaagagttacaagaaattt
ggtggccctctggaaagattagatgcaattgctcgggatgctgaattagttgataagtca
gaaacagacctcagacgactaggagaattggtgcataatggttgcattaaagctttaaag
gataattcttcaggaacagagcgaacaggtggtcgacttggaaaagtaaagggtccaacg
ttccgaatatctggagtacaagtgaatgccaagctcgtcatctcccatgaagaagaatta
ataccattgcacaaatccattccttcagatccagaagaaagaaagcagtatactatccca
tgccacacaaaggcagctcattttgatatagactggggcaaagaagatgattccaatttg
ttaattggtatctacgaatatggatatggaagctgggaaatgattaaaatggatcctgac
ctcagtttaacacacaagattcttccagatgatcctgataaaaaaccacaagcaaagcag
ttgcagacacgtgcagactacctcatcaaattacttagtagagatcttgcaaaaaaagaa
gctcagagactttctggtgcaggagggtcaaagaggagaaaagcaagagctaagaagaat
aaagcaatgaagtctataaaagtgaaagaagaaatgaagagtgattcttcacccctgcct
tcagagaagtccgatgaagatgatgataaggatgagatcacttctgtgaaacatccaaat
aaaaaaattaaaacagaaagagacagtgaagaaagacctgagccagatgtttttataaag
aaggaatcagaagaaaagagggaagcaaaagaaaaagagaataaaagagaacttaaaagg
gagataaaagaaaaagaggataagaaagatataaaagaaaaagattttaaagagaaaaga
gaaaacaaagtaaaagaagctatacagaaagaaaaagacataaaggaagaaaagttgaac
gaatccaagtctgagagcaaggaaagatccaagaaatcttcagtgtcagatgctccggtt
catatcactgcaagtggtgaaccagttcccatatctgaagaatctgaagagctagatcag
aagacattcagcatttgtaaggaaagaatgaggcctgtcaaagcagctttgaaacaactt
gataggcctgaaaaaggcctttcagaaagagaacaactggagcatactagacagtgttta
ataaaaattggagaccatatcacagaatgtctaaaagagtatacaaatcctgaacaaatc
aagcagtggagaaaaaacctgtggatttttgtatctaagtttacagagtttgatgccaga
aaattacataaattatataaacatgctattaaaaaacggcaggaatctcagcaaaataat
gaccagaacagcaacttgaatgctcaagtgattagaaatccagatgtggaaagattaaaa
gagaatacaaatcacgatgatagtagcagggacagttattcatctgatagacacttatct
cagtatcatgatcatcataaagaccggcatcagggagattcttacaaaaagagtgactct
aggaaaagaccctattcttcttttagtaatggtaaagatcatcgtgactgggatcattac
aagcaagaaagcaggtattacagtgatagagagaaacacagaaaactggacgatcacagg
agtagagatcacaggtcaaatttggaaggaagtataaaggatagatctcattctgatcat
cgttctcattcagatcatcggttacattcagaccatcgggcaagttctgagtatacacac
cataaatcttccagggattataggtatcactcagattggcaaatggaccacagagcttcc
agtagtggccccagatcaccactagatcagagatctccttatggctccagatctccattt
gaacattcaattgaacacaaaagtacacctgagcatacctggagtagtcggaaaacataa
DBGET
integrated database retrieval system
