Canis lupus familiaris (dog): 488982
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Entry
488982 CDS
T01007
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
488982 (TAF5L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfa03021
]
488982 (TAF5L)
03036 Chromosome and associated proteins [BR:
cfa03036
]
488982 (TAF5L)
Transcription machinery [BR:
cfa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
488982 (TAF5L)
Coactivators
SAGA/TFTC/STAGA complex
488982 (TAF5L)
Chromosome and associated proteins [BR:
cfa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
488982 (TAF5L)
STAGA complex
488982 (TAF5L)
TFTC complex
488982 (TAF5L)
SAGA complex
488982 (TAF5L)
SLIK complex
488982 (TAF5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
TFIID_NTD2
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_WDR19_1st
PEP5_VPS11_N
PROPPIN
eIF2A
Beta-prop_IP5PC_F
Ge1_WD40
WD_LRWD1
Nbas_N
Mala_s_1-like
vATP-synt_AC39
ODR4-like
Motif
Other DBs
NCBI-GeneID:
488982
NCBI-ProteinID:
XP_022273134
Ensembl:
ENSCAFG00000012124
VGNC:
47084
LinkDB
All DBs
Position
4:9637148..9665450
Genome browser
AA seq
635 aa
AA seq
DB search
MVRNSGVILDLAEVERLKASCGSPISCGSVVMPRISQLVRFWDREVMKRVRTEQIQMAVS
CYLKRRQYVDSDGPLKQGLRLSQTAEEMAANLTVQSESGCANIVSAAPCQAEPQQYEVQF
GRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNLVQNSPKSTVESFYSRFHGMFLQNASQK
DVIEQLQTTQTIQDILSNFKLRAFLDNKYVVRLQEDSYNYLIRYLQSDNNTALCKVLTLH
IHLDVQPAKRTDYQLYASGSSSRSEGNGLEPTDMPAPILQNEAALEVLQESIKRVKDGPP
SLTTICFYAFYNTEQLLNTAEISPDSKLLAAGFDNSCIKLWSLRSKKLKSEPHQVDVSRI
HLACDILEEEDDEDDNAGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSF
TNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKF
HPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKL
WDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTYCSTPADGSSGE
LVGVYTGQMSNVLSVQFMACNLLLVTGITQENQEH
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggttagaaatagtggtgtcattttagacttggcggaagtggagcgcttgaaagcttcg
tgcggttctcccatcagttgtgggagtgtcgttatgccgcggatctcgcagcttgtacgg
ttctgggatcgggaggtcatgaaacgagtgcgcaccgagcagattcagatggcagtgtcc
tgctacctcaaacgccggcagtacgtggactccgatggtcccctgaagcaaggactgcgg
ctgtcacagactgctgaggagatggcggccaacctcacagttcaatcagaatccggttgt
gccaacatagtgtctgcagccccttgccaggcagagccccagcaatatgaagtacagttt
ggacgactacgaaattttctcactgattctgattcccagcatagccacgaagtgatgcct
ctcctctatcctctctttgtctacctccacctcaacctggtccagaacagtccgaagagc
acagtggaaagtttttacagccgcttccatggaatgtttctgcagaacgctagccagaag
gatgtcattgagcagctacagaccactcaaaccatccaggacatcctgtctaactttaag
cttcgagcattcctagataacaagtacgtggtccgtctccaggaagacagctacaactac
cttatccgctacctccaaagtgacaacaacaccgccctgtgcaaagtactcaccttgcat
atccatcttgacgtgcagcctgccaagagaacagactaccagctctatgccagcggcagc
tcctctcgaagcgagggcaacggcttagagcccactgatatgcccgcccctattctgcag
aatgaggctgccctggaggtcttgcaggagagcattaagcgcgtcaaggatggccctccc
tccctcactaccatctgtttctatgccttctataacacagagcagctgttgaacactgca
gaaatctccccagatagcaagctgcttgctgctgggtttgacaactcctgtataaaactg
tggagtttacgatccaagaagttaaaatcagaaccccatcaagtagacgtgtctcgcatc
cacttggcttgtgacattctggaggaggaggatgatgaggatgacaatgcgggcacagag
atgaagatactacggggacactgtggaccagtgtacagcacaaggttcctcgcagacagc
tcagggttgctctcttgttctgaagacatgtccattaggtactgggacctcgggagtttc
accaacactgtgttgtaccaaggacatgcctaccctgtgtgggacctggacattagccca
tatagcctgtactttgccagcgggtcccatgaccgcaccgcgaggctgtggtcatttgat
cggacgtacccgctgagaatatatgctggacacctggcagatgtggactgtgtcaaattc
caccctaattcaaactacttagccacaggctcgactgacaagactgtccggctatggagt
gctcaacaggggaactccgtgaggctcttcacgggccaccgtggccctgtgctctctctt
gccttttctcccaatggtaagtacttggcatcagctggtgaggaccagcggctgaagcta
tgggacttggcctctgggaccctttataaagaactgagaggccacacggacaatatcacc
agcctcaccttcagtccggacagtagtctgatcgcctctgcatccatggacaactctgtg
cgtgtctgggacatcaggaacacttactgcagcacacctgccgatggttcctctggggaa
ctcgtgggtgtgtacaccgggcagatgagcaatgtactgagcgtgcagttcatggcctgc
aaccttctcctagtgactggaatcacacaagaaaatcaggaacattaa
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integrated database retrieval system
