Canis lupus familiaris (dog): 489197
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Entry
489197 CDS
T01007
Symbol
SH3TC2
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfa04131
]
489197 (SH3TC2)
Membrane trafficking [BR:
cfa04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
489197 (SH3TC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_2
SH3_1
TPR_12
SH3_9
SNAP
TPR_1
TPR_2
TPR_8
DUF5418
TPR_7
Motif
Other DBs
NCBI-GeneID:
489197
NCBI-ProteinID:
XP_005619373
Ensembl:
ENSCAFG00000018334
VGNC:
46136
LinkDB
All DBs
Position
4:59565747..59670219
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AA seq
1291 aa
AA seq
DB search
MGGCFCIPGEPSLSWGPGKETPSKNPTVSTECIALSEEKEKCFVPQNMTPDLTLSFSVKS
RSRRCVNGPLQEAARRRLWALENEHQEVCALFKDLSARLVGIQSQKAQFLITFKTMEEIW
KFSTYLNLGYVSACLEHLLFDHKYWLNCRLVEDTEIQVSVDEKHLETIYLALLIQEGHFF
CRAMCSVAQPAEKEGEYLTLCKKELISVKIVEGESEWEGVSLVTGQRGLVPLSALEALPL
PFHQWFLKNYPGSCGLSRKRNWTGSYQIGRGKCKAWKDYEREEKDELTFHQGESIEIIGF
VIPGLQWFIGKSTRSGEVGFVPTRNIDPESYSPMNKSSAFFSDEERCSLWVLGSDRKAEC
ASFLHTLAHTDIASVYRLSGFESIQNLPNDLSASQPEGVKEARPGRGWEEQQAVGSRQSS
SSEDSSLEEELLSAASDSYHLPEPDDLDDPELLMDLNTGQEEEEAENFASILAFLDHKGY
ADHFKSLYDFSFSFLTSSFYSFSEEDELVAYLEASRKWAKRSHRTWAHARLCFLLGRLSV
RKVKLSQARVYFEEAVYILDGAFEDLSLVAALYINLAAIYLRQRLRHKGSTLLEKAGALL
TCLPDRESSTKNELDVVAYVLRQGIVAGSCPLEARACFLAIRLLLSLGRHEEVLPFAERL
QLLSGHPPDLDATATILSFLYDKKYLPHLTVASVQQRGTQGDQGMSLPIWQVYLVLQNTT
KLLGVPFSNWGEVSALACPALRQALAVCEEQSNWSTQRALCLILSKVYLQHRSPDGAIHY
LSQALVVGQLLGEQEAFESSLCLAWAYLLASQAKKALDILEPLLYSQKETSQKGVVQNLL
GLALQGEGWVNRAAKNYLRALNRAKETGNVRNQAVTLANLGHLTLKSWAQQPAKDYLLQA
VRLYSELQTSMETDMELVQVLLWLAQVLVHGRQLASGRLCYEMALLFGLRHGHLKSQLQI
TKSLCHFYSSVSPNPKACITYHEHWLALAHQLRDREMEGRLLESLGQLYRNLNTPRSLRK
SLICIKESLRIFIDLGEKDKAAEAWLGAGRLYYLMQEDELVELYLQAAIQKALKSEEPSL
ALKLYEEAGDVFFNGTRHRHRAVEYYRAGAVPLARRMKAMRTELRVFNKLTELQISLEGY
EKALEFATLAARLSTVIVFQFLGDQKQELVAFHRLATVYYSLRMYEMAEDCYLKTLSLCP
PWLQSPKEALYYAKVYYRLGRLTFYQLKDAHDATEYFWLALAAAVLLDDKELQDTIRSRL
DNICRSSLWHSSPFGRSSERARWLSGGGLAL
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atgggtggctgcttctgcattcccggggagccgagtctatcctggggcccaggtaaagaa
actccttccaagaatccaaccgtatcaactgagtgtatagccttatctgaagagaaggaa
aaatgttttgtgccacagaatatgactccagatctgacgctctccttcagtgtgaagagc
cgctccaggaggtgtgtaaacggccccctgcaggaagcggccaggaggcggctctgggcg
ctggagaatgagcaccaggaggtgtgtgccctgtttaaggacctctcagccaggttggtg
ggtatccagtcccagaaggctcaattcctcatcaccttcaagaccatggaggaaatctgg
aaattttctacctacttgaacttaggttatgtatctgcatgtctggaacatctccttttt
gaccataagtactggctcaactgcagattggtggaagatacagagatccaagtgtcagtg
gatgagaaacatctggaaacaatatacctggcactcctgatacaggaaggtcacttcttc
tgcagagccatgtgctccgtggctcagccagctgagaaggaaggggagtatttgacgctt
tgcaagaaggagttaatctccgtgaagatagttgaaggcgaatctgagtgggagggcgtg
tccttggtgacgggtcagcggggcctggtgcccctgtcagctctggaagctctgccgctc
cctttccaccaatggttcctaaagaattacccaggaagctgtggcctttccaggaagagg
aattggacaggctcctatcagatcggcagaggaaaatgtaaggcctggaaggactatgag
agggaagaaaaggatgagctgacttttcaccagggagaaagcatcgagatcatcggcttt
gtcatacctgggcttcagtggttcattgggaagtcgacgcgctcaggagaagtgggcttt
gttcccaccaggaacatagatcctgagtcttattccccaatgaacaagagttctgccttt
ttcagtgacgaggaaagatgctctctgtgggtcctgggaagtgataggaaagctgagtgt
gccagcttcctccacacacttgctcatactgacatcgcgtctgtctaccggcttagtggg
tttgaatccatccagaatcttccaaacgatctaagtgcgtcccagcctgaaggcgttaag
gaggccaggcctggtagaggctgggaagagcagcaggccgtgggctccagacagtccagc
agctctgaggactccagcctggaggaggagctcctctcagccgcctcggacagctaccac
ttgccggagcctgatgacctagatgacccagaactgctcatggacctaaacactggtcag
gaagaggaggaggctgagaacttcgcctccatattggcttttttggatcacaagggttac
gctgaccactttaagagcctctatgatttctctttctctttcctcacatcttccttttac
agcttctctgaggaggatgaacttgtggcctacctggaggcctcaaggaagtgggccaag
cggagccacaggacctgggcccatgcccggctctgcttcctcctgggccgactgagtgtc
agaaaggtcaaactctctcaggccagggtgtactttgaggaggctgtgtatattcttgat
ggggcatttgaagacctatccttggtggctgctctgtatatcaatctggctgccatctac
ctgaggcagaggctgaggcataaaggctccactctgctggagaaagcaggtgctctgttg
acttgcctgcctgaccgtgagtctagtaccaagaatgagctcgacgtggtggcctatgta
ctacgccagggcattgtggcaggcagctgtcctttggaggccagggcctgttttctggcc
atccgattgctcctaagcctaggccggcatgaggaggtcctgccctttgctgagcgcctg
cagctcctgtctggacaccctcctgacttggatgctacagccaccatcttaagttttctg
tatgataaaaaatatcttccacaccttacagtggcctctgtccagcaacgtggtacccag
ggtgaccaagggatgtcccttccaatttggcaggtctacctggttcttcagaacaccacc
aagctccttggagttcccttttcaaactggggtgaagtttctgccctggcctgcccagca
ctcaggcaggcgctggctgtctgcgaggagcagagcaattggagcacccagagggccctg
tgtctcatcctgtccaaagtgtacctccaacacaggtctcctgatggtgccatccattat
ctgagccaggctttggtggtagggcagctgctgggtgagcaggaagcctttgagtcttcc
ctctgcctggcatgggcttatctcttagccagccaggcaaagaaggctttggacatcctc
gaaccgctcctatactcccagaaggagacatcccaaaagggggtggtccagaacctcctg
ggacttgcacttcaaggtgaagggtgggtgaacagggcagccaagaattatctccgggcc
ttgaacagagcaaaggaaacggggaatgtacgcaaccaggcagtgactttggccaatctt
ggccacctgacccttaagtcctgggctcagcagccagccaaggactatctcctgcaggct
gtccgactctattctgaactccagaccagcatggagacggacatggaattagtacaggtg
cttctctggttggcccaagtcctggtgcatggacgccaactggccagtggtcgcctctgt
tatgaaatggcattgctgtttggcttaaggcatggacacctaaagagtcagcttcagatc
accaaatccctctgccatttctacagctctgtatccccaaaccccaaggcatgcatcacc
taccatgagcactggctggccctggctcatcaactcagggaccgagagatggaagggcgg
ctgctggagtccctcgggcagctctatcgaaacctgaacacacccaggtctctcaggaag
tctctcatctgcatcaaggagagcctgcgtatcttcattgaccttggggagaaagacaag
gctgctgaggcctggcttggagctgggcgactctactacctcatgcaggaagatgaactg
gtggagctgtacctgcaggcagccatccagaaagccctgaagtctgaggagccctctctg
gctctcaaactctatgaagaagcaggtgacgtgttcttcaatgggacccgccacaggcac
cgtgcggtggagtattaccgagctggggctgttcctctagcaagaaggatgaaagccatg
agaacagagctgcgggttttcaacaagctgacggagctgcagatcagtctggaaggctat
gagaaggctttggagtttgccaccctggcggccagactcagcacagtcatagtcttccaa
ttcctaggagatcagaagcaggagctggtggcctttcaccgtctggctacagtgtactat
tccctgcgcatgtatgagatggctgaggactgctacctgaagactctgtccctctgtcca
ccgtggctacagagtcccaaggaggccctatactacgccaaggtatattatcgcctgggc
cgactcaccttctaccagttgaaggatgcccacgatgccaccgagtacttctggctggcc
ctggcggcagcggtcctgctggatgacaaggagctgcaggacaccattaggagcaggctg
gacaacatctgtcggagctccctgtggcacagcagccccttcgggcgctcctcggagagg
gcgcggtggctgagtggtggggggctggccctctga
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