Canis lupus familiaris (dog): 489541
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Entry
489541 CDS
T01007
Symbol
RAI1
Name
(RefSeq) retinoic acid-induced protein 1 isoform X2
KO
K19749
retinoic acid-induced protein 1
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfa03000
]
489541 (RAI1)
Transcription factors [BR:
cfa03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
489541 (RAI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
489541
NCBI-ProteinID:
XP_022274365
Ensembl:
ENSCAFG00000018437
VGNC:
45328
UniProt:
A0A8C0Q4N0
A0A8I3S3Y9
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All DBs
Position
5:complement(41825914..41946978)
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AA seq
1896 aa
AA seq
DB search
MQSFRERCGFHGKQQNYQQTSQETSRLENYRQPSQAGLSCDRQRLLAKDYYNPQPYPGFE
GGAGTPAGPARGSKGLPSQQSLQGRPAFSGYSVQDSSPYPGRYSGEESLQAWGAPQPPPP
QPQPLPGGVGKYDDNLMKKAAVPPGRQYPEQGTQLPFRTHSLHVQQQLPQPQQPLAYPKL
QRQKLQNDMASPLPFPQGGHFPQHSQSFPASSTYSSSGQGGQGSGQGAHSYKSCTAPSTQ
PHDRPLAPNASLAPGQRVQNLHAYQSGRLSYDQQKQQQQQQQQQALQSRHHAQETLHYQN
LAKYQHYGQQGPGYCQPDAAVRTPEQYYQTFSPSSSHSPARSVGRSPSYSSTPSPLMPNL
ENFPYNQQPLSTGAFPAGITDHSHFMPLLNPSPTDAASSVDTQAGNCKPLQKDKLPENLL
SDLSLQSLTALTSQVENISNTVQQLLLSKAAAPQKKSVKNLVSRTPEQHKSQHCSPEGSG
YSAEPAGTPLSEPLSSTPQSTHAEPPETDYLSGSEDPLERSFLYCNQARSSPARVNSNSK
AKPESVSTCSVTSPDDMSTKSDDSFQSLHSTLPLDSFSKFVAGERDCPRLLLSALAQEDL
ASEILGLQEAIGEKADKAWAEAPSLAKDASKPPFSLENHSACLDSVAKNAWPRPGEPEAL
PESLQLDKGGSAKDFSPGLFEDPSVGFAAPDPKKTTGALSFGTKSTLGAATADPAAAAFD
CFPDTTTASSADSANPFAWPEENLGDACPRWGLHPSELTKGLEQGGKATDGVGKESAHEA
SACPGFQEEEPPGEKATVPRDSEQEEAGGVKEEVGGLLQCPEVAKADRWLDDSRHCCSAT
DFGDLPLLPPTGQKEDLEAEEEYSSLCELLGSPEQRPGLQDPLSPKAPLMCTKEEAEEVL
DSKTGWGPPCHLSGDSVILLGPTVGAESKVQSWFESSLSHMKPGEEGPDSVLAPGDSATL
APDASLAQKPNKPAVPEAPIAKKEPVPRGKSLRSRRVHRGLPEAEDSPCRAPVLPKDLLL
PESCTGPPQGQMEGAGAPGRGASEGLPRMCTRSFTALSEPRTPGPPGLTTTPAPPDKLGG
KQRAAFKSGKRVGKPSPKAASSPSNPAALPVASDSSPMGSKTKETDSPGTPGKDQRSMIL
RSRTKTQEVFHSKRRRPSESRLPNCRATKKLLANNHLPATFKVSGSPQKEGRAGQRARVP
KPGTGSKLSDRPLHALKRKSSFLAPVPTKKRNLVLRSGSGGDVKEEGAEDPSSLFKRMSS
PKKTKPPKGNSEPAVKPPPPEAPDACLKLASRAAFQGAMKTKVLPPRKGRGLKLEAIVQK
ITSPSLKKFACKAPGAPPGNPVSPALPEKDRGLKSAGGSPVGAGEGLLNVGAGQKLPAAP
GADPLCRNPTNRSLKGKLLNSKKLSSTDCFKTEAFTSPEALLPGGTALAPKKRSRKGRAG
ALGLPKGPLEKRPHLGPALLLTPRDRANGAQGGGEDSSGGGGKKPKTEELGLASQSPEGR
PCQPQTRAQKQPGHANYSSYSKRKRLTRGRAKNTTSSPCKGRAKRRRQQQVLPLDPAEPE
IRLKYISSCKRLRADSRTPAFSPFVRVEKRDAFTTICTVVNSPGEEPKPHRKPSSSASSS
SSSCSFSLDATGASLATLPGGSVLQPRPSLPLSSTMHLGPVVSKALSTSCLVCCLCQNPA
NFKDLGDLCGPYYPEHCLPKKKPKLKEKVRPEGTCEEASPPLERTLKDLECVAATGATAA
GKPPRPEGPADPAKQGSLRTSARGLSRRLQSCYCCDARGDGGEEAAPADKSRKHECSKEP
PAEPGGDTQEHWVHEACAVWTGGVYLVAGKLFGLQEAMKVAVDMTCSSCQEAGATIGCCH
KGCTHTYHYPCASDAGCIFMEENFSLKCPKHKRLPL
NT seq
5691 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcttttcgagaaaggtgtggtttccatggcaaacaacagaactaccagcagacc
tcacaggagacatctcgcctggagaattacagacagccgagccaggccgggctgagctgc
gatcggcagcggctgctggccaaggactattataacccgcagccgtaccccggcttcgag
ggcggcgccggcacacccgccggccccgcgcggggcagcaagggcctgccgtcccagcag
tccctgcagggcaggccggccttctctggctacagcgtgcaggacagcagcccgtaccct
ggccgctactcgggcgaggagagcctgcaggcctggggggccccccagccgccgcccccc
cagccacagcccctgccagggggcgtgggcaaatatgatgacaacttgatgaaaaaggcc
gcagtgccccctggcaggcagtacccagagcagggcacccagctgccctttcggactcac
tccctgcatgtccagcagcagctgccgcagccccagcagcccctggcgtaccccaaactc
cagaggcaaaaactgcagaacgacatggcctcgcctctgcccttcccccagggtggccac
ttcccccagcactcacagtctttccctgcttcctccacctactcatccagtggccagggg
ggccagggcagcgggcagggcgcccactcctacaagagctgcaccgcaccgtccactcag
ccccacgacaggccactggcccccaacgccagcctggcccctgggcagcgggtccagaac
cttcacgcctaccagtctggccgcctgagctacgatcagcagaagcaacagcagcagcag
cagcagcagcaggccctccagagccggcaccatgcccaggaaaccctccattaccaaaac
ctcgccaagtaccaacactacgggcagcagggcccgggttactgtcagccggacgcggcc
gtcaggactccagagcagtactaccagaccttcagccccagctccagccactcacccgca
cgctctgtgggccgctcgccctcctacagctccaccccgtcaccgctgatgcccaacctg
gagaactttccctacaaccagcagccgctcagcactggggccttccccgcgggcatcacg
gaccacagccacttcatgcccctgctcaacccgtccccgaccgacgctgctagctcggtg
gacacccaggctggcaactgcaagccgctgcagaaggacaagctccccgagaacctgctc
tcggacctcagcctgcagagcctcacagctctgacatcccaggtggagaacatatccaac
accgtccagcagctgctgctctccaaggccgcggcgccacagaaaaagagcgtcaagaac
ctggtgtccaggaccccggaacagcacaaaagccagcactgcagccctgagggcagcggc
tactcggccgagccagccggcacgccactgtccgaaccgctgagcagcacgccgcagtcc
acccatgccgagccgcccgagaccgactacctgagcggctctgaggacccgctggagcgc
agcttcctctactgcaaccaggcccgtagcagccccgccagggtcaacagtaactccaag
gccaagcccgagtcagtgtccacctgctccgtgacctcacctgacgacatgtccaccaaa
tccgatgactccttccagagcctgcacagcaccctgccgctcgacagcttttccaagttt
gtggcaggtgagcgggactgcccgcggctgctgctcagcgccctggcccaggaggacctg
gcctctgagatcctcgggctgcaggaggccattggcgagaaggctgataaggcctgggcc
gaggcgcccagcctggccaaggacgccagcaagcctcccttctcgctggagaaccacagc
gcctgcctggactcagtggccaagaatgcgtggccgcggccaggggagccagaggccctg
cctgagtccttgcagctagacaagggtggcagcgccaaggacttcagcccagggctgttt
gaagacccttctgtgggcttcgccgcccctgaccccaagaagacaactggggccctctct
ttcggcaccaagtccaccctcggggcagccacggcagaccccgccgcagccgcttttgac
tgcttcccggacacgaccaccgccagctcggcggacagcgccaacccctttgcctggccc
gaggagaacctgggggacgcgtgtccccggtggggcctgcaccccagtgagctcaccaag
ggcctagagcagggtgggaaggccacggatggcgtgggcaaggagagtgcccatgaggct
tcggcctgcccaggcttccaggaggaggagcccccgggggagaaggccactgtacctcgg
gactcggagcaggaggaggcgggcggggtgaaggaggaggtgggtgggctgctgcagtgc
cctgaggtggccaaggctgaccggtggctggacgacagccgccactgctgctctgccacc
gattttggggacctgcccctactgcctcccaccggtcagaaagaggacctggaggcggag
gaggagtactcctccctgtgtgagctcctgggcagccctgagcagaggcctggcctgcag
gacccgctgtcgcccaaggccccactgatgtgcaccaaggaggaagcagaggaggtgctg
gacagcaagaccggctggggccccccgtgccacctctctggggactctgtcatcttgctg
ggcccgactgtgggtgccgagtcaaaggtccagagctggtttgagtcctccctgtcccac
atgaagccgggcgaagaaggccctgacagtgtgctagctccgggggactcagccaccctg
gccccggatgcctccctggcccagaagccgaacaagcccgctgtgcccgaggcacccatt
gctaagaaagagcctgtgccacgcggcaaaagcttacggagccggcgggtacatcggggt
ctgcccgaggccgaggactccccatgcagggctccagtgctgcccaaagacctcttgctc
cctgaatcctgcacagggcccccgcaggggcagatggagggagcaggagccccaggacgg
ggggcctcagaagggctccccaggatgtgcacgcgctccttcaccgccctgagcgagccc
cgcacacccgggcccccaggcctgaccaccacacccgcccccccggacaaactgggaggc
aagcagcgagccgccttcaagtctggcaagcgggtgggcaagccgtcacccaaggcggcg
tccagccccagtaacccggccgccctgccggtggcctcggatagcagccccatgggctcc
aagaccaaggagacagactctcccggcaccccgggcaaggaccagcgctctatgatcctg
cggtcccgcaccaaaacccaggaggtgttccactccaagaggcggcggccctcagagagc
cggctccccaactgccgagccaccaagaagctcctggccaacaaccacctgccggccacg
ttcaaggtctcgggcagcccccagaaggagggcagggccggccagcgggcaagggtcccc
aagccaggcacgggcagcaagctctccgatcggcccctccatgcgctcaaaaggaagtcg
tccttcctggcgcctgtccccaccaagaagcggaacctggtcttacggagcggcagtggg
ggggacgtgaaggaggagggggccgaggacccctccagcctcttcaagaggatgtcttct
cccaagaagactaagccccccaagggtaacagtgagcccgccgtgaagcccccaccccca
gaggcccccgacgcctgcctgaagctggcctcaagggcggccttccagggggcgatgaag
accaaggtgcttccgccccggaagggccgcggcctgaagctggaggccatcgtgcagaag
atcacctcgcccagcctgaagaagtttgcgtgcaaagcgccgggggcccctcccggtaac
cctgtgagcccagctctccctgagaaggaccgtgggctcaagagtgccgggggcagccca
gttggggcaggagaaggtctcttaaatgtgggcgctgggcagaagctcccagcagcccct
ggggccgacccgttatgcagaaatccaaccaacagatccttaaaaggcaaactcctaaac
agtaagaaactgtcctcgactgactgtttcaaaactgaggccttcacgtccccggaggcc
ctgttgcccggggggactgccctggcgcctaagaagagaagccggaaaggcagggctgga
gcccttggactccccaaaggtcccctggagaagcggccccatctaggcccggctctgctc
ctgaccccccgagacagggccaatggcgctcaggggggtggggaggacagctctggtgga
ggaggcaagaagccaaagacggaggagctgggcctggcctcccagtcccctgagggccgg
ccctgtcagccccagacaagggcacagaagcagccaggccatgccaactacagcagctat
tccaagcgaaagcgactcacccggggccgggctaagaacaccacctcctcaccctgtaag
ggccgtgccaagcggcggcggcagcagcaggtgctgcccctggatcccgcagagcctgaa
atccgcctcaagtacatttcctcctgcaagcggcttcgagcggacagccgcaccccagcc
ttctcaccctttgtgcgggtggagaagcgagacgcattcaccaccatatgcactgttgtc
aattccccaggggaggagcccaagccccacaggaagccttcctcctccgcctcctcttcc
tcatcctcatgctcgttctccttggatgcaaccggggcctccttggccacgctccctgga
ggctccgtcctgcagccacggccctccctgcccctctcttccaccatgcatctggggccc
gtggtctccaaggccttgagtacctcttgccttgtttgctgcctctgccaaaacccggcc
aacttcaaggacctcggggacctctgtgggccctactaccccgaacactgcctccccaaa
aagaagccaaaactcaaggagaaggtgcggccagagggcacctgcgaggaggcctcgccg
cccctcgagagaacactcaaagacctcgagtgtgtggccgccaccggcgccactgccgct
ggcaaacccccgaggcccgagggcccggccgaccccgccaagcagggctcgctgcgcacc
agcgcccggggcctgtcgcggcggctgcagagctgctactgctgtgacgctcggggggac
ggtggcgaggaggcagccccggccgacaagagccgcaagcacgaatgcagcaaggagcca
ccggctgagcccggcggggacacccaggagcactgggtgcacgaggcctgcgccgtgtgg
acgggcggggtctacctggtagctgggaagctctttgggctgcaggaggccatgaaggtg
gccgtggacatgacctgttccagctgccaagaagccggggccaccatcgggtgctgccac
aaaggatgcacccacacctaccattacccgtgtgccagcgatgcgggttgcatattcatg
gaagagaacttttctttgaagtgtcccaaacataagaggctgccgttgtaa
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integrated database retrieval system
