Canis lupus familiaris (dog): 489627
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Entry
489627 CDS
T01007
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X4
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cfa03036
]
489627 (CHD5)
Chromosome and associated proteins [BR:
cfa03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
489627 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
HDA2-3
ResIII
PHDvar_NSD
HTH_Hrp3
AP3D1
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
489627
NCBI-ProteinID:
XP_022274682
Ensembl:
ENSCAFG00000019545
VGNC:
39203
LinkDB
All DBs
Position
5:complement(60035909..60094034)
Genome browser
AA seq
1992 aa
AA seq
DB search
MLLRLAPSCKEEDGGLGGFDDYFPEEPVGLPKKKKSKKLKENRSKGKRKKKELPLGPAFG
TVLAAPHLSCTWSVAMPSSHQMARSTLPQAFATTAFSAGIRLPSCPGSNDELSENEDDLE
EKSESEGSDYSPNKKKKKKLKDKKEKKAKRKRKDDDEDDNDDGCLKEPKSSGQLMAEWGL
DDVEYLFSEADYHTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKG
SSAAAAAAAVAAAVETVTIAPPLAVSPQQPPQPVPIRKAKTKEGKGPGVRKKIKGSKDAK
KKGKGRKVAGLKFRFGGISNKRKKGSSSEEDEREESDLDSASIHSSSVRSEGSTALGKKS
KRRRKKKRIDDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWS
CPHCEKEGIQWEPKDDDDEEEEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCL
NPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEPPAPFMVGLPGPDVEPGVPPPKPL
EGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPPFDYGSGDEDG
KSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLIKWKDLPYDQCT
WEIDDIDIPYYDNLKQAYWGHRELMLGEDARLPKRLVKKGKKLKDDKQEKPPDTPIVDPT
VKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLY
KEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIR
SGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVL
NSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDL
LGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLL
NIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRV
LIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAG
GLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAK
RKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEGMMSQGQRPVTPIPDVQ
SSKGGALAASAKKKHGSTPPGDNKDVEDSSVIHYDDAAISKLLDRNQDATDDTELQNMNE
YLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGK
RIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDEDFEERPEGQSGRRQSRRQLKSD
RDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEKE
FRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGK
YSTPDLIPEGPEGKKPSEVISSDPNTPVPASPAHLLPAPLGLPDKMEAQLGYMDEKELGV
QKPKKPPEIQALPTALDRVEGEDKHESSDGKERLEETEKAPPSPEQLPKEEMLPEKEKIL
DKLELSLIHSRGDGNDFRPDDTRVEEKEPIETQQNGDKEDDEEGKKEDKNGKFKFMFNIA
DGGFTELHTLWQNEERAAVSSGKIYDIWHRRHDYWLLAGIVTHGYARWQDIQNDPRYMIL
NEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPNHPAMALNAR
LAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPSMLSRIPPV
AARLQMSERSILSRLTNRAGDPTIQQGAFGNSQMYNNNFGPNFRGPGPGGIVNYNQMPLG
PYVTASVSPADI
NT seq
5979 nt
NT seq
+upstream
nt +downstream
nt
atgcttctgagacttgcaccctcatgtaaagaagaagatggtggccttggaggctttgat
gactatttccctgaggagcctgtgggccttcccaagaagaagaaatccaagaagctcaag
gagaacaggtccaaagggaagcggaagaagaaagagctccctctgggccctgcatttgga
actgtgctggctgctcctcacctctcctgcacttggagtgtggcaatgccttcttcccat
cagatggccaggtcaaccctccctcaggcgtttgccacaacagccttttctgctggcatc
aggttgcccagctgccctgggagcaatgatgagctgtcggaaaatgaagatgatctggaa
gagaagtcagagagtgaaggcagtgactactcccccaataaaaagaagaaaaaaaagctc
aaggacaagaaggagaagaaagccaagcggaaaaggaaggatgatgacgaggatgataat
gatgatgggtgtctaaaggagcccaagtcctcagggcagctcatggccgagtggggcctg
gatgacgtggagtacctgttctccgaggctgactaccatacgctgaccaactacaaggcc
ttcagccagttcctcaggccgctcatcgccaagaagaacccaaagatccccatgtccaaa
atgatgactgttctgggtgccaagtggcgggagttcagtgccaacaaccctttcaagggg
agctcagcagcagcagctgcagcggcagtggctgcggctgtggagacagtcaccatcgcc
cctccgctggccgtcagccctcagcagccaccccagcctgtacccatccgcaaggccaag
accaaggagggcaaggggccaggagtgagaaagaagatcaaaggttccaaggatgcaaag
aaaaagggaaaggggagaaaggttgcagggctcaagttccgctttggagggatcagcaac
aagaggaagaaaggctcctcgagcgaggaagatgagcgggaggagtcggacttggacagt
gccagcatccacagctcctctgtgcgctctgagggctccactgccctggggaagaagagc
aagaggcggcgcaagaagaagaggattgacgatggtgatggctacgagaccgaccaccag
gactactgtgaggtgtgccagcagggtggggagatcatcctgtgtgacacctgcccgcgg
gcctaccacctcgtctgccttgacccagagctggagaaggctcccgagggcaagtggagc
tgtccccactgcgagaaggaggggatccagtgggagccaaaggacgacgacgacgaggag
gaggagggcggctgcgaggaggaggaggacgaccacatggagttctgccgcgtgtgcaag
gacggcggcgagctgctctgctgcgacgcgtgcccctcctcctaccacctgcactgcctc
aacccgccgctgcccgagatcccaaacggtgaatggctctgcccgcgctgtacttgcccc
ccgctgaagggcaaagtccagcggatcctacactggaggtggacggagccccctgccccc
ttcatggtggggctaccagggcccgacgtggagcctggtgtccccccacccaagcccctg
gagggcattccggagagagagttctttgtcaagtgggctgggctctcctactggcactgc
tcctgggtgaaagagctacagctggagttataccacacggtgatgtatcgcaactaccaa
agaaagaatgacatggacgagccaccaccctttgactacggctccggtgacgaggatggc
aaaagtgagaaaaggaagaacaaggaccctctctatgccaagatggaggagcgcttctac
cgctatggcatcaagcctgagtggatgatgattcaccgcatcctgaaccacagcttcgac
aagaagggggacgtgcattacctgatcaagtggaaggacttgccctatgaccagtgtacc
tgggagattgacgacattgacattccctactatgacaacctgaagcaggcctactggggc
cacagggagctgatgctgggtgaggatgccaggctgcccaagaggctggtcaagaaaggc
aagaagctcaaggacgataaacaggagaaaccgccagacacacccattgtggatcccacg
gtcaagtttgacaagcagccctggtacattgactcgacgggtggcacgctgcacccgtac
cagctggagggcctcaactggctgcgcttctcctgggcccagggcactgacaccatcctg
gctgacgagatggggctgggcaagaccgtgcagaccattgtcttcctctactctctgtac
aaggaggggcactccaaggggccctacctggtcagtgctcccctgtccaccatcatcaat
tgggagcgtgagttcgagatgtgggcacccgacttctatgtggtcacttacacgggggac
aaggagagccgctccgtgatccgggagaatgagttttcttttgaggacaacgccattcgg
agtgggaagaaggtgtttcgcatgaagaaagaagtgcagatcaaatttcacgtcctgctc
acctcctatgagctcatcaccatcgaccaggccatcctgggctccattgagtgggcctgc
ctcgtggtggacgaggcccaccggcttaagaacaaccagtccaagttcttcagagtctta
aacagctacaagatcgattacaagctgctgctgacggggaccccccttcagaacaacctg
gaggagctttttcacctgctcaacttcctgactccagagagattcaacaatctggagggc
ttcctggaggagtttgctgatatctccaaggaagaccagatcaagaagctgcatgacctg
ctagggccacacatgctgaggcggctcaaggctgatgtcttcaagaacatgccagccaag
actgagctgattgttcgtgtggagctgagccagatgcagaagaagtactacaagttcatc
ctcacgcggaacttcgaggcactcaactccaaggggggtgggaaccaggtgtcgctgctc
aacatcatgatggatctgaagaagtgttgcaaccacccctacctcttcccagtggctgct
gtggaggcccctgtcctgcccaatggctcctacgatggcagctccctggtcaagtcttca
ggcaagctcatgctgctgcagaagatgctcaagaagctgcgggacgaagggcatcgtgtg
ctcatcttctcccagatgaccaagatgctggaccttctggaggacttcctggagtatgag
ggctacaagtatgagcggattgacggtggcatcacggggggcctccggcaagaggcgatc
gacagattcaacgcccctggggcgcagcagttctgcttcctcctctccacccgggcgggt
ggcctgggcatcaacctggccacagcggacacagtcatcatctacgactcggactggaat
ccgcacaatgacatccaggccttcagccgtgcccaccgcattggacagaacaagaaggtg
atgatctaccgctttgtgactcgggcctcggtggaagagcgcatcacgcaggtggccaag
cgcaagatgatgctcacgcacctagtggtgcggcctggcctcggctccaagtctggctcc
atgaccaagcaggagctggatgacatcctcaagttcggcacagaggagctcttcaaggac
gatgtggagggcatgatgtctcagggccagaggcctgtcacgcccattcctgatgtccag
tcctccaaaggcggagccctggctgccagtgccaagaagaaacatggcagcaccccacca
ggtgacaacaaggacgtggaggacagcagtgtgatccactatgacgatgcggccatctcc
aagctgctggatcgaaaccaggacgccacggacgacacggagctgcagaatatgaatgag
tacctgagctccttcaaggtggcccagtacgttgtgcgcgaggaggacggcgtggaggag
gtggagcgggagatcatcaagcaggaagagaacgtggaccctgattactgggagaagctg
ctgcgccaccactatgagcagcagcaggaggacctggcccgcaatctgggcaagggcaag
cgcattcgcaagcaggtcaactacaacgatgcctcccaggaggaccaggagtggcaggac
gagctctcagataaccagtctgaatattccattggctctgaggatgaggacgaggacttt
gaggaaaggccagaagggcagagtggacggcgacagtccaggaggcagctgaaaagtgac
cgggacaagcccctgccacctcttcttgcccgtgtgggtggcaacatcgaggtgctgggc
ttcaatgcccggcagcggaaggcctttctgaacgccatcatgcgctggggcatgcccccc
caggatgccttcaactcccactggctggtgcgggacctccgagggaagagcgagaaggag
tttagagcctatgtgtccctcttcatgcggcacctgtgtgagccgggggctgatggcgca
gagaccttcgcggacggtgtgccccgggagggcctctcgaggcagcacgtgctcacccgc
atcggggtcatgtcactagttaggaagaaggttcaggagtttgagcacgttaacgggaag
tacagcaccccggacttgatccccgaggggcccgagggcaagaagccaagcgaggtcatc
tcctcggaccccaacacgccagtgcctgccagccctgcccacctcctgccggctccactg
ggcctgccagacaaaatggaagcccagctaggctacatggatgagaaggagctgggggtg
cagaaaccaaagaagcccccagaaatccaggccctgccaactgccctggacagagtggag
ggcgaggacaagcatgagagctcagatggcaaggagcgactggaggagacggagaaggcc
ccgccatccccagagcagctgccaaaagaagaaatgcttcctgagaaggagaaaattctg
gacaagctggagctaagcttgattcacagcagaggggatggcaatgatttcaggccagat
gacaccagagtggaggagaaggagcccattgaaacacagcaaaatggtgacaaagaggat
gatgaggaggggaagaaggaggacaagaatgggaagttcaaattcatgttcaacattgca
gatgggggcttcacagagctacacacactgtggcagaatgaggaacgtgctgctgtgtcc
tcggggaaaatctacgacatctggcaccggcgtcatgactactggctgctggcgggcatc
gtgacgcatggctatgcccgctggcaggacatccagaatgacccaagatatatgatcctc
aacgagcccttcaagtccgagatccacaagggcaattacttggagatgaagaacaagttt
ctggcccgtaggttcaagctactggagcaggcgctggtcatcgaggagcagctccggagg
gctgcctaccttaatatgacccaggaccccaaccacccagccatggccctcaacgcccgc
ctggccgaggtggagtgccttgctgagagccaccagcatctgtccaaggagtcccttgct
gggaacaagccagctaacgctgtcctgcacaaggtcctgaaccagctggaggagctgcta
agcgacatgaaggcggatgtgacacgcctcccgtccatgctgtcccgaatcccccctgtg
gccgcccgcctccagatgtcagagcgtagcatcctgagccgcctgaccaaccgagctggc
gaccccaccatccagcagggcgctttcggcaactcccagatgtacaacaacaactttggg
cccaacttccggggccctggaccgggagggattgtcaactacaaccagatgcccctgggg
ccctatgtgaccgcttctgtctctcccgcagatatctag
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integrated database retrieval system
