Canis lupus familiaris (dog): 489859
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Entry
489859 CDS
T01007
Symbol
CPSF4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform X5
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03015
mRNA surveillance pathway
cfa05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
489859 (CPSF4)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
489859 (CPSF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfa03021
]
489859 (CPSF4)
03019 Messenger RNA biogenesis [BR:
cfa03019
]
489859 (CPSF4)
Transcription machinery [BR:
cfa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
489859 (CPSF4)
Messenger RNA biogenesis [BR:
cfa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
489859 (CPSF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_2
zf-CCCH_12
zf-CCHC
zf-CCCH_4
zf-CCCH_RBM22
zf-CCCH_DUS3L
zf-C3H1
zf-CCHC_3
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
489859
NCBI-ProteinID:
XP_005621146
Ensembl:
ENSCAFG00000015036
VGNC:
39576
LinkDB
All DBs
Position
6:complement(11756345..11777092)
Genome browser
AA seq
243 aa
AA seq
DB search
MQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPSCKFMHPRFELPMGTTEQPP
LPQQTQPATKRAPQVIGVMQSQNSSAGNRGPRPLEQVTCYKCGEKGHYANRCTKGHLAFL
SGQ
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaaatcatcgccagcgtggaccacatcaagttcgacttggagatcgcggtggag
cagcagctcggggcacagccgctgcccttccccgggatggacaagtcgggagctgctgtc
tgcgaattctttttgaaagctgcctgtggcaaagggggcatgtgtccattccgccacatc
agcggtgagaagaccgttgtgtgcaaacactggctgcgggggctgtgcaagaagggggac
cagtgtgagttcctacacgagtacgacatgaccaagatgcccgagtgctacttctactcc
aagtttggggagtgcagcaacaaggagtgccccttcctgcacatcgaccccgagtccaag
atcaaggactgcccttggtatgaccgtggcttctgcaagcatggtcccctgtgcaggcac
cgacatactcgaagagtcatctgtgtgaattacctcgtgggattctgcccggaggggccc
tcgtgtaaattcatgcaccctcgatttgaactgccaatgggaaccaccgagcagccccca
ctgccacagcagacgcaacctgcaacaaagagagccccgcaggtcatcggggtcatgcag
agtcaaaacagcagcgcgggcaaccggggaccgcggccgctggagcaggtcacctgttat
aagtgtggtgagaaaggacactacgccaacagatgcaccaaagggcacttggcctttctc
agtggacagtga
DBGET
integrated database retrieval system
