Canis lupus familiaris (dog): 489966
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Entry
489966 CDS
T01007
Symbol
TNRC6A
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein isoform X10
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfa03019
]
489966 (TNRC6A)
03036 Chromosome and associated proteins [BR:
cfa03036
]
489966 (TNRC6A)
Messenger RNA biogenesis [BR:
cfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
489966 (TNRC6A)
Chromosome and associated proteins [BR:
cfa03036
]
Eukaryotic type
Gene silencing
piRNA pathway
489966 (TNRC6A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
Motif
Other DBs
NCBI-GeneID:
489966
NCBI-ProteinID:
XP_038400150
Ensembl:
ENSCAFG00000017531
VGNC:
47699
LinkDB
All DBs
Position
6:complement(22816233..22917782)
Genome browser
AA seq
1776 aa
AA seq
DB search
MEEKKKKKDDKKKKEAAQKKATEQKIKVPEQIKPSVSQPQPANSNNGTSTATSTNNNAKR
ATANNPQQQQQPQPPQQPQQPPQQPPQPPQQQPQPAQALPRYPREVPPRFRHQEHKQLLK
RGQHFPVIAANLGSAVKVLSSQSESSALTNQQPQNNGEVQNSKNQSDINHSTSGSHYENS
QRGPVSSPSDSSTNCKNAVVNDSPETEAWPSVPGSDPELASECMDADSASSSESERNITI
MASGSTGGEKDGLRNSTGLGSQNKFVVGSSSNNVGHGSSPGPWGFSHGAIISTCQVSVDA
PESKSESSNNRMNAWGTVSSSSNGGLNPSTLNSASNHGAWPVLDNNGLALKGPVGSGSSG
INIQCSTIGQMPNNQSINSKVGGSSTHGTWGSLQETCESEVSGTQKVSFSGQPQNITTEM
TGPNNTTNFMTSSLPNSGSVQNNELPSNTGAWRVSTMNHPQIQAPSVMNGTSLSHLSNGE
PKSGGSYGTTWGAYGSNYSGDKCSSPNGQANGDTVNATLMQPGINGPMGTNFQVNTNKGG
GVWESGATNSQNASWGSGNGANSGGSRRGWGTPAQNTGTNIPSVEWSKLPSNQHSNDSAN
GNGKKFTNGWKSTEEEDQASAASQTTEQNSVWAKTGGTVESEGSTESTGRLEEKATGENQ
SRDRRKIDQHTLLQSIVNRTDLDPRVLSNSGWGQTPIKQNTAWDTETSPRGERKTDNGTE
AWGSSATQTFNSGACTDKTSPTSNDTSSVSGWGDPKPALRWGDSKGSSCQGGWEDDAAAT
GMVKSNQWGNSKEEKSAWNDSQKSKQGWGDGQKSNQGWSVSASDNWGETSRSNHWGEANK
KSSSGGSDSDRSVSGWNELGKTSSFTWGNNINPNNSSGWDESSKPNPSQGWGDPPKSNQS
LGWGDSSKPVTSPDWNKQQDIVGSWGIPPATGKPPGTGWLGGPIPAPTKEEEPTGWEEPS
PESIRRKMEIDDGTSAWGDPSKYNYKNVNMWNKNVPNGSSRSDQQAQVHQLLPSASAISN
KEAGSGSGWGEPWGEPSTPATTVDNGTSAWGKPIDSGPSWGEPIAAASNTSTWGSSSVGP
QALSKSGPKSMQDGWCGDDMPLPGNRPTGWEEEEDVEIGMWNSNSSQELNSSLNWPPYTK
KMSSKGLSGKKRRRERGTMKGGNKQEEAWINPFVKQFSNISFSRDSPEENVQSNKMDLSG
GMLQDKRMEIDKHSLNIGDYNRTVGKGPGSRPQISKESSMERSPYFDKDGIVADESQNMQ
FMSSQSMKLPPSNSALPNQALGSIAGLGMQNLNSVRQNGNPSMFGVGNTAAQPRGMQQPP
AQPLSSSQPNLRAQVPPPLLSPQVPVSLLKYAPNNGGLNPLFGPQQVAMLNQLSQLNQLS
QISQLQRLLAQQQRAQSQRSVPSGNRQQQDQQGRPLSVQQQMMQQSRQLDPSLLVKQQTP
PSQQQPLHQPAMKSFLENVMPHTTPELQKGPSPINAFSNFPIGLNSNLNVNMDMNSIKEP
QSRLRKWTTVDSISVNTSLDQNSSKHGAISSGFRLEESPFVPYDFMNSSTSPASPPGSIG
DGWPRAKSPNGSSSVNWPPEFRPGEPWKGYPNIDPETDPYVTPGSVINNLSINTVREVDH
LRDRNSGSSSSLNTTLPSTSAWSSIRASNYNVPLSSTAQSTSARNSDSKLTWSPGSVTNT
SLAHELWKVPLPPKNITAPSRPPPGLTGQKPPLSTWDNSPLRVGGGWGNSDARYTPGKTN
MLPGMVSYGLFAEQEPVPTVESNRDLCITHCEIGFE
NT seq
5328 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagaaaaagaaaaaagacgacaagaaaaagaaggaagctgctcaaaagaag
gccactgaacaaaaaatcaaagtgccagaacagataaagcccagtgtaagccagcctcag
cctgccaactctaataacggcacttccacagcaaccagcactaataataatgccaagcga
gccacagccaacaatccgcagcagcagcagcagccacagccgccacagcagccacagcag
ccgccgcagcagccaccgcagccgccacagcagcagccgcagccagcacaggccttgcct
cggtatcctcgggaagtaccaccacgatttcgccaccaggaacacaaacagcttctaaag
aggggtcagcattttcctgtcatagcagcaaacctgggatctgctgttaaagtgttaagc
agccagtcagaaagcagtgctttaacaaatcaacagccacaaaataacggagaggtgcag
aacagcaaaaaccagtcagatataaaccacagtacttcaggatcccattatgaaaattca
cagcggggacctgtgtcttctccgagtgactctagcacaaattgtaagaatgctgttgta
aacgactcccctgagacagaagcatggccctcagtccctggcagtgatccagagttggct
tcagaatgtatggatgctgattctgcctccagttctgaatcagagagaaacatcactatc
atggcttcagggagcacaggtggtgaaaaagatggccttcggaatagcactggacttggt
tcccaaaacaagtttgtggttggtagcagcagcaataatgtgggccatggaagtagtcct
gggccatggggtttttcccatggagccataataagcacatgtcaggtctctgtggatgct
cctgaaagcaaatcagaaagtagcaacaatagaatgaatgcttggggcactgtaagttct
tcatcaaatggagggttaaatccaagcactttgaattcagctagcaaccatggtgcctgg
ccagtattagacaacaacggacttgccctcaaagggcctgtagggagcggtagttctggc
atcaatattcagtgtagtaccataggccagatgcctaacaatcagagtattaactctaaa
gtgggtggttcttccacccatggtacctggggaagccttcaggaaacttgtgaatctgaa
gtaagtggtacacagaaggtttcattcagtggtcaacctcagaatattaccactgagatg
actggaccaaataacactactaactttatgacctctagtttaccaaactccggttcagta
cagaataacgaactgcctagtaatacaggggcctggcgtgtgagcacaatgaatcatcct
cagatacaggctccatcggttatgaatggcacttccctttctcatcttagcaatggagag
ccaaaaagtggaggctcttacggtactacgtggggtgcctatggttctaattactctgga
gacaaatgttcgagccctaacggccaagctaatggtgacactgtgaatgcaactctaatg
cagcctggcataaatgggcctatgggcactaactttcaagtgaacacaaataaaggagga
ggtgtgtgggagtctggggcaacgaattcccagaatgcatcgtggggaagtggaaatggc
gcaaattctggaggaagtcgacgaggatggggaactcctgcacaaaacactggcactaat
atacccagcgtggagtggagcaaactgcctagcaatcagcattccaatgacagtgcaaat
ggcaatggtaagaagtttacaaatggatggaaatctactgaggaagaggatcaggcttct
gccgcatctcagacaactgagcagaacagtgtgtgggccaaaacaggaggtacagtggag
agtgaaggtagtacagaaagcactggacgcctcgaggagaaagccactggggaaaatcag
agtagagatcggagaaaaattgatcagcacacattactccaaagcatcgtaaacagaact
gacttggatccacgtgtcctctccaactctggttggggacagactcctattaagcagaat
actgcctgggatacggaaacatcacctagaggggaaagaaagactgacaatgggacagag
gcctggggaagctctgcaacacagacttttaactcaggggcatgtacagataagactagc
cctactagtaatgatacctcatctgtatcggggtggggagatcccaaacctgctctgagg
tggggagattccaaaggctcaagctgccaggggggatgggaagatgatgctgctgctaca
ggaatggtcaagagcaatcagtgggggaacagcaaagaagagaagtccgcatggaatgat
tcgcaaaagagcaaacagggatggggtgatggacagaaatcaaaccaagggtggtccgtt
tctgccagtgataactggggagaaacgtcaaggagtaaccattggggtgaggctaataag
aaatctagctcaggaggtagtgacagtgacaggtctgtttctggttggaatgaacttggt
aaaactagttcttttacttggggaaataacataaatccaaataattcgtcaggatgggat
gaatcttctaaacctaatccttcccagggatggggagatcctccaaagtctaatcagtct
ctaggttggggagattcgtcaaagccagtcacttctccagactggaacaagcaacaagac
attgtcgggtcttggggaatcccaccagcaacaggcaaacctcctggtacaggctggctg
ggaggacctataccagccccaacaaaagaagaagagcccacaggctgggaggaaccatcc
ccagaatccatacgtcgcaaaatggagatcgatgacggaacttcagcttggggagatccg
agcaaatacaactacaaaaatgtgaacatgtggaacaaaaatgtcccaaatggcagcagc
cgttcagaccagcaagcacaggtacaccagttgctaccatctgcaagtgccatctcaaac
aaagaggcaggcagtggctctggctggggtgagccctggggggagccttctactccagcc
acaactgtggataatggtacttcagcatggggtaaacccatagacagtggtcccagctgg
ggggagcccattgctgcagcatccaacacatccacgtggggctccagctctgttggtcct
caagcattaagcaaatctgggccaaaatctatgcaagatggctggtgtggtgatgatatg
ccattgcctggaaatcgccccactggctgggaagaggaagaggatgtagagattggaatg
tggaatagtaattcatctcaagagcttaactcatctttaaattggcctccatatacaaag
aaaatgtcatcgaagggtctgagtggcaaaaaaaggagaagggaaaggggaaccatgaaa
ggtggaaacaaacaagaagaagcatggataaatccattcgttaaacagttttcaaatatc
agtttttcgagagactcacccgaagaaaatgtacagagcaataagatggatctttccgga
ggaatgttacaggacaaacgaatggagatagataaacatagcctaaatattggtgattac
aatcgaacggtcgggaaaggccctggttctcggcctcagatttccaaagagtcttccatg
gagcgcagcccttactttgataaggatggcattgtagcagatgaatcccaaaacatgcag
tttatgtccagtcaaagcatgaagcttcccccttcaaatagtgcactacctaaccaggcc
cttggctccatagcagggctgggtatgcaaaacttgaattctgttagacagaatggcaat
cccagtatgtttggtgttggaaacacagcagcacaaccccggggcatgcagcagcctcca
gcacaacctcttagttcatctcagcctaatcttcgtgctcaagtgcctcctccattactc
tcccctcaggttccagtttcattgctgaagtatgcaccaaacaacggtggcctgaatccg
ctctttggccctcaacaggtagccatgctgaaccagctatcccaactaaaccagctttct
cagatctcccagttacagagattgttagcgcagcagcaaagggcgcagagtcagagaagc
gtgccttctgggaaccggcagcagcaagaccagcagggtcgacctcttagcgtgcagcag
cagatgatgcagcagtcccggcaactcgatcccagcctgttggtgaagcagcagaccccg
ccatctcagcagcagccactccatcagccagccatgaaatccttcctcgagaatgtcatg
ccccacactacacctgagctgcagaaagggccatcaccaataaatgctttcagcaacttc
ccgataggcttgaactcaaacttgaatgtaaatatggatatgaacagtattaaagagcca
cagtcaagactaaggaagtggactacagtggacagcatttctgtgaacacatctttggat
caaaactccagcaaacatggtgctatttcaagtggtttcaggctggaagagtctccattt
gttccctatgactttatgaacagcagtacttctccagccagccctccgggttcaatagga
gatggctggccacgtgccaaatcgcctaacggctctagcagtgttaactggccaccagaa
tttcgccctggtgaaccatggaaaggttatccaaacattgaccctgaaactgacccttac
gtcactcctggcagtgtcataaacaatctttcaattaatactgtgcgggaagttgaccac
ctcagggacaggaacagtgggtcatcctcatccttgaacaccacgctgccttcaactagt
gcctggtcatccattcgtgcctccaactacaacgttcccctcagcagtacagcacaaagc
acttcagccagaaatagtgattccaaattgacatggtctcctggttcagttacaaacacc
tctctggctcatgagctgtggaaggtccctttaccacctaaaaacatcactgctccgtcc
cgcccacctccgggactcactggtcagaagccacccttgtctacgtgggataactctccc
cttcgtgtaggtggaggatggggaaattctgacgccaggtacaccccaggtaagacaaac
atgcttcctgggatggtttcttatggtttatttgctgaacaggaaccagtacccacagtt
gaatctaacagagacctgtgcattacccactgtgaaataggatttgaa
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integrated database retrieval system
