Canis lupus familiaris (dog): 490008
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Entry
490008 CDS
T01007
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X17
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04612
Antigen processing and presentation
cfa05145
Toxoplasmosis
cfa05152
Tuberculosis
cfa05164
Influenza A
cfa05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
490008 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
490008 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
490008 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
490008 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
490008 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cfa01001
]
490008 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cfa04054
]
490008 (CIITA)
Enzymes [BR:
cfa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
490008 (CIITA)
Protein kinases [BR:
cfa01001
]
Serine/threonine kinases: Other
TAF1 family
490008 (CIITA)
Pattern recognition receptors [BR:
cfa04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
490008 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_8
LRR_14
LRR_9
CARD
Motif
Other DBs
NCBI-GeneID:
490008
NCBI-ProteinID:
XP_005621605
Ensembl:
ENSCAFG00000018931
VGNC:
39273
UniProt:
A0A8C0RXY6
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All DBs
Position
6:complement(33156962..33219510)
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AA seq
1191 aa
AA seq
DB search
MNHFQTILARVRMLLSSHQPSQVQALLDNMLEKELLSREYHCALLHEPDGEALARKISLT
LLEKGDPDLALLRWAWSGWQTPVAEGDPNSSKDHVDSGQFATMELGPLEGGYLELLNSST
DPLQLFHLYDQTDLAREEIELFSEPDMDTINCEQFSRLLCDMEGDEETREAYANIAELDQ
YVFQDSQLEGLGKDIFIEHIGLEDMISETVEVLEEAGQKSQKRPEPLTVPMVTGTFLVES
VSDPSALPCLSSPAIFNEQPAPVQSWLGETVLMPVPASGSLLSCLSLPAGGIQIVPSLPS
LPQGLWPISGAGTGVSGMVIYQGEMPQASQVLPSSGPAVQSLPKSPDRPGSTSPFAPSAA
DLPGMPEPALTSRANMTEDQLSPPRCVAAHEVSSKPPKLPESVKQFCSSLRDKYQAEPAG
PDGILVEVELVRARLEKSSSKSQDRELATPDWAERQLARGGLAEVLLAAGDRRRPRETQV
IAVLGKAGQGKSCWAREVSRAWACGQLPQYDFVFYIPCHCLDRAGDTYRLQDLLFSLGPR
PQPVDDEVFGHILRRPDRVLLILDAFEGLEGQDGACGPTSTEPQSLRGLLAGLFQRKLLR
GCTLLLIARPRGRLAQSLSKADVVFEVAGFSAQQAETYMTRYLDHSGATEHRERALALLR
GQPFLLSHSHSPTVCQAVCQLSEALLELGDGAKLPSTLTGLYVGLLGPAAQDSPPGALAG
LARLAWELGRRHRGTLQESQFPSAEVRAWAVAKGLVRPVPGAPDTELAFSSFLLQCFLGA
VWLALSSEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLAGLLFQPHADCLGALAGPAGV
TLGDRKQKVLSRYLKRLQPGTLRAGRLLELLHCAHEASDPALWQHVVQGLPGRLSFLGTR
LTPPNAYVLGSALAAAGQDFSLDLRSTGIDPSGLGSLVGLSCVTHFRAALSDAVGLWESL
QQRGETKLLRAVEEKFTIEPFKAKSPKDVEDLGNLVQIQRTRSSSEDTAGELPAVRDLKK
LEFALGSVFGPQAFPKLVKILEAFSSLQHLDLDSLSENKIGDEGVEQLSATFPRLKALET
LNLSQNSITDVGACKLAEALPSLAPSLLRLSLYNNYICDVGAESLAQVLPDMVSLRVLDV
QYNKFTGAGAQQLAASLRKCPHVETLAMWTPTIPFGVHEHLQQLDSRISLR
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgaaccactttcagaccatcctggctcgggtccggatgctgctgtccagccatcagccg
agtcaagtgcaagccctcttggacaacatgctagagaaggagcttctctcccgggagtac
cactgcgccctgctccatgagcctgatggcgaggccctggccagaaagatttccttgacc
ctgctggagaaaggagacccagacttggccctcttgaggtgggcgtggagtgggtggcag
accccggtggcggagggggaccccaactcctccaaggaccatgttgacagtggacagttt
gccaccatggagttggggcctctggaaggcgggtacctggagcttctcaacagcagtacc
gatcccttgcagctcttccacctctatgaccagacggacctggctagagaagagattgag
ctcttctcagaacccgacatggacaccatcaactgcgaacagttcagcagactgttgtgt
gacatggaaggtgacgaagagaccagggaggcttatgccaatatcgcggaactggaccag
tacgtgttccaggactcccaactggagggtctgggcaaagacattttcatcgagcatata
ggattagaagacatgatcagcgagactgtggaggtgctagaggaagcaggacagaaaagt
cagaaaagacctgagcccctcactgtacccatggtgactggcaccttcctggtggagtca
gtgagtgacccctcggctcttccctgcctgtcatcacctgccatcttcaacgagcagccc
gcacctgtccagagctggctcggggagactgtcctgatgccagtacctgcctctggttcc
ttgctgagctgcctgagtcttcctgctggtggcatccagatcgtccccagcctcccctcc
ctgccccaggggctctggcccatctcgggggctgggacaggggtgtctggcatggtcatc
tatcaaggggagatgccccaggccagccaggtgcttccttccagtggcccagccgtgcag
agtctccccaagtccccagatcggcctggctccaccagcccctttgccccatctgccgct
gaccttcctggcatgccagaaccagccctgacctcccgtgcaaatatgacagaggaccag
ctgtcccctccccgatgtgtggcagctcacgaggtctccagcaagcctccaaaattgccc
gagagcgtgaagcagttctgcagctccctgcgagacaagtaccaggccgagcccgcaggc
ccggatggcatcctggtggaggtggagctggtgagggcacggctggagaagagcagcagc
aagagccaggacagggagctggccaccccggactgggcggagcggcagctggcccgaggg
ggtctggccgaggtgctgctggccgcgggtgaccgccggcggccgcgggagacacaggtg
atcgctgtgctgggtaaagcaggacaggggaagagttgctgggcccgagaagtgagccgg
gcctgggcctgcggccagctgccacagtacgacttcgtcttctacatcccctgccactgt
ctggaccgtgcgggggacacgtaccgcctgcaggatctgctcttctccctggggccccgg
ccgcagcccgtggatgacgaggtctttggccatatcttgaggaggcccgaccgtgttctt
ctcatcctggatgccttcgaggggctcgaaggccaagacggtgcgtgcggccccacgtcc
acagagccccagtccctccgggggctgctggccggcctcttccagcgtaagctgctgcga
ggctgcaccctgctgctcatcgcccggccccggggccgcctggcccagagcctgagcaag
gccgacgtcgtgttcgaggtggccggcttctcggcccagcaggccgagacctacatgacg
cgctacttggaccactctggggccacggagcaccgagagcgagccctggccctcctccgc
ggccagccgttcctcctcagccacagccacagccccactgtgtgccaggccgtgtgccag
ctctccgaggccctcctggagctgggcgacggggccaagctgccctccacgctcacggga
ctctacgtgggcctgctaggccctgcggcccaggacagccccccgggggccctggcggga
ctggccaggctggcgtgggagctgggccgcagacaccggggcacgctgcaggagagccag
ttcccgtcggcggaggtgagggcctgggccgtggccaagggcttggtgcggcccgtccct
ggggccccagacacggagctggccttctccagcttcctcctgcagtgcttcctgggggcc
gtgtggctggccctgagcagtgagatcaaggacaaggagctgccacagtacttggcattg
accccaaggaaaaagaggccctacgacaactggctggagggcgtaccgcgcttcctggcc
gggctgcttttccagcctcatgccgactgcctcggagccctggcagggccggccggggtc
accttgggggacaggaagcagaaagtgctcagcaggtacctgaagcggctgcagccaggg
acgctccgggccgggcggctgctggagctgctgcactgtgcccacgaggcctcggaccct
gcgctctggcagcacgtggtgcaggggctcccgggtcgcctgtccttcctgggcacccgg
ctcacgcctcccaacgcctacgtgctgggcagcgccttggcggcggcgggccaagacttc
tccctggacctccgcagcactggcatcgacccctctggactggggagcctcgtgggactc
agctgtgtcacccatttcagggctgcgctgagtgacgcggtggggctgtgggagtctctc
cagcagcgaggggagaccaagctgctccgggcggtggaggagaagttcaccatcgagcct
ttcaaggccaagtccccgaaggacgtggaagacctgggcaacctcgtgcagatccagagg
acgaggagttcctcggaagacacagctggagaactccctgctgtccgggacctcaagaag
ctggagtttgcgctgggctcggtcttcggcccccaggctttccccaaactggtgaagatc
ctcgaggctttttcctctcttcagcatctggacctggactcgctgagtgagaacaagatc
ggggacgagggtgtggagcagctgtcagccaccttcccacggctgaaggccctggagact
ctcaacctgtcccagaacagcatcaccgacgtgggcgcctgcaagctcgcagaagccctg
ccctccctggctccatccctcctcaggctgagcctgtacaataactacatctgtgatgtg
ggagctgagagcctggcacaggtgcttccagacatggtgtccctccgggtgttggatgtc
cagtataacaagttcacgggcgccggggcccagcagctcgccgccagcctgagaaagtgc
cctcacgtggagacactggcgatgtggacgcccaccatcccgttcggcgtccatgaacac
ctgcagcagctggactcacggatcagcctgagatga
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