Canis lupus familiaris (dog): 490075
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Entry
490075 CDS
T01007
Symbol
IFT140
Name
(RefSeq) intraflagellar transport protein 140 homolog
KO
K19672
intraflagellar transport protein 140
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cfa03037
]
490075 (IFT140)
Cilium and associated proteins [BR:
cfa03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
490075 (IFT140)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
Beta-prop_EML_2
WD40_CDC20-Fz
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40
Beta-prop_HPS5
WD40_Prp19
WDR55
TPR_IFT80_172
Beta-prop_CAF1B_HIR1
TPR_GEMI5
TPR_COPA_B
Beta-prop_WDR75_1st
Clathrin
RNase_HII
Consortin_N
EIF3I
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
490075
NCBI-ProteinID:
XP_038406359
VGNC:
97202
UniProt:
A0A8C0RVR6
A0A8I3S254
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All DBs
Position
6:40497349..40577227
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AA seq
1459 aa
AA seq
DB search
MALYFDHPIEAPDSVESPSHIHWHPVHPFLAVASVSRIAGGSVDIYLEQGEHVSDTHIER
SFRVTSLCWHPTRPILAVGWETGEVTVFNKQDKEQHAVPPTHTTDITVLKWSPNGNCLVS
GDRLGVLLLWRLDQRGRVQGTPLLKHDHGKPLTHCIFRLPPPGEDLVQLAKAAVSGDERA
LDMFNWRKTGFGSFLKMGSQEGLSFFVSLMDGTVLYVDEKGKSTQVASTDSSIQTLFYIE
KREALVVVTQNLLLSLYVVRPEGKAEEVMKVKLSGKTGCRADIALIEGSVLVTAIGEPVL
RFWDLEGGENYMLSPAEKFGFEKAENINCVSYCKTKGLLAAGTDKGRVAIWRKLPGPQSS
RVAEGKDRWIFQTPSELEGNITQIKWGSRKSLLAVNNMSSVVILSEQAMSSHFHQQVAVV
QTSPSLLSVSFLSTGVTHSLRIDMHVSGVFTTKDAIAVWNGKQVMVFEPSGGTLRNAGTF
LCETPVLAMHEDNVYTVEPNRVQVRTWQGTVKQLLLFSEAEGSPCFLDICGNFLVVGTDL
AHFKSFDLSRREAKVHCSDKNLAALIPGAAGVASLRCNASGSRISILLSKVDNSPDSKIC
FYDVEMDTMTILDFKTGQINRREELSFNGQETKKSHTFVDERLMDLIPVNHLWDQNEPRL
FVCEAVREAPGAQLQFGDKKPPTEDSPVPTADVLILSFFITEEHGFLLQDSFPRPPAYQN
LLGIEAPHYYFTRKPGEADREDQVDSGCPCVGRRPLRDFIGLEGCDKPTRDAMLQFSFFV
AVGDMDEAFKSIKLIKSEAVWENMARMCVKTQRLDVAKVCLGNMGHARGARALREAEQEP
ELEARVAMLAIQLGMLEDAEQLYRKCGRYDLLNKLYQASDQWQKAVEVAELHDRIHLRTT
YYNYARHLEASADRGLALSYYEKSDTHRFEVPRMLSEDLQSLELYINKMKDKTLWRWWAQ
YLESQAEMDAALHYYELAQDYFSLVRIYCFQGNIQKAAEIANESGNWAASYHLARQYESQ
EEVRQAVHFYTRAQAFNNAIRLCKENGLDDQLMNLALLSSPEDMTEAALYYEDKGEHMDR
AVMLYHKAGHFSKALELAFATQQFVALQLIAEDLDERSDPALLARCSDFFIEHSQYEKAV
ELLLAAKKYHEALRLCLEQNMTITEEMAEKMTVSKDSKDLSEESRRQLLEQIANCCMRQG
NYHLATKKYTQAGNKLKAMRALLKSGDTEKIVFFAGVSRQKEIYIMAANYLQSLDWQKEP
EIMKNIISFYTKGRALDLLAGFYDACAQVEIDEYQNYDKAHGALTEAHKCLSKAKAQSPL
DQETKLAQLQSKMTLVKRFIQARRMYPEDPKEAVKQCELLLEEPELEGTIRMGDVYGFLV
QHYLQGEEFHMAYKYLEEMRKRVPSANMSYYVNQRTVDAVHQGLGIPLMHTVPERVHHNS
AEDHKEMDEEVLEEVENDP
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atggccctctactttgaccacccaatagaagccccagactctgtcgagtctccttcccac
atccattggcaccctgttcatccattcctggcggttgcctccgtcagcaggattgcagga
ggcagcgtggatatatatctggaacaaggtgagcatgtgtccgatacacatattgagagg
tcattccgggtcacttccttgtgctggcacccaacacgaccgatccttgctgttggctgg
gagactggggaagtgacggtgtttaataagcaggacaaggagcagcacgcagtccccccg
acacataccaccgacatcaccgttctcaagtggagccccaacggcaactgccttgtgtca
ggggacaggcttggtgtcctgctcttgtggaggttggaccaaagaggtcgagtacaaggg
acgcccctgctgaaacacgaccacggaaaacccctaactcactgtatcttccggctcccc
cctcctggcgaggaccttgttcagttggcgaaggcagctgtgagcggtgacgagagagcc
ctggacatgtttaactggaggaaaactggctttggaagtttcctgaaaatgggatctcaa
gagggactatcattctttgtcagcttgatggatgggacagtgctctacgtggatgagaaa
gggaagagcacccaggtggcatccacagacagctccatccaaacgctcttctacatcgag
aagagggaggccctggtggtggtcacgcagaacctgctgctgtctctgtacgtggtgagg
cccgagggcaaagcagaggaagtgatgaaggtgaagttgagcgggaagacgggttgccgg
gcagacatcgcattgattgaaggcagcgtgcttgtgaccgccataggggaacctgttctc
agattctgggatctagaaggtggagagaattacatgctgagtccagcagagaagtttggt
tttgaaaaagctgagaacataaactgtgtttcttactgtaaaaccaaaggtcttctggca
gcgggcaccgataaagggcgagtagccatttggagaaaactgccaggcccccagagcagc
cgagtggcagagggcaaggacaggtggatttttcagacccctagtgagctcgaaggcaac
atcacacagattaagtggggctcccggaagagcctcctggcagtgaacaacatgagctcc
gtggtgatcctcagcgagcaggccatgtcttcacacttccatcagcaagtggccgtggtg
cagacttccccaagcttactgagcgtgtccttcctgtccacgggggtgacacacagcctg
cgtatagacatgcacgtcagtggagtgttcaccaccaaggatgccattgctgtctggaac
ggaaaacaggtgatggtctttgagccttctggaggcacattacggaatgcaggaactttc
ctgtgtgagactccagtgttagccatgcatgaggacaatgtgtacaccgtggagccaaac
cgagttcaagttcgaacctggcaggggactgtgaaacagctcttactgttctccgaggcg
gaggggagcccgtgcttccttgacatctgtggaaatttcctggttgtggggacagacctg
gctcactttaaaagctttgatctttcccgaagagaggcgaaagtgcactgcagcgacaag
aacctggccgcactgatcccgggcgcagcgggcgtggcctcactgaggtgtaacgccagc
ggcagcaggatcagcatcctcctcagcaaggtagacaacagccctgactccaaaatctgc
ttctatgacgtggaaatggacaccatgaccatccttgacttcaagacggggcagatcaat
cgcagggaggagttgtcctttaatgggcaagagaccaagaagagccacacctttgtggat
gagaggctgatggatctcattcccgtgaaccacttatgggaccagaacgagcccaggctg
tttgtgtgcgaggccgtgcgggaggcgccaggagcccagctgcagttcggggacaagaag
ccgcccactgaggacagcccagtccccacggcggacgtgctgattctgtccttcttcatt
acggaagagcatggcttcttgcttcaggacagcttcccacggcctcccgcctaccagaat
cttctggggatcgaagcgcctcattattacttcacaagaaagccaggagaagcagacaga
gaagaccaggtggactcagggtgcccgtgcgtgggcaggaggccactgcgagacttcatc
gggctggagggctgcgataagcccactcgggatgccatgcttcagttcagtttcttcgtc
gctgtcggagacatggatgaagctttcaaatctatcaaactcatcaaaagtgaggctgtc
tgggagaacatggcgcgcatgtgcgtgaagacccagcggctagacgttgccaaggtgtgc
ctggggaacatgggccatgcgcgtggagcccgagcgctgcgggaggccgagcaggagccg
gagttggaggccagagtggccatgctggccattcagctgggcatgctggaggacgccgag
cagctgtacaggaagtgcgggcgctacgatctcctgaacaagttgtaccaggcctctgac
cagtggcagaaggctgtggaagtcgcagagctccatgatcgcattcatctgcgcaccacc
tactacaactacgcccggcacctggaggcgagcgccgaccgcggcctggccctcagctac
tatgagaagtccgacacccaccgctttgaggtccccaggatgctctcagaggacctgcag
tctctggagctctatatcaataagatgaaggacaagaccctgtggaggtggtgggcccag
tacctggagagccaggctgagatggacgctgcgctgcactactacgagctggcacaggac
tacttctccctggtccgcatctactgcttccagggcaacattcagaaggctgctgagata
gccaacgagagcggaaactgggccgcatcctatcacctggcccgtcagtacgagagccag
gaggaggtgaggcaggccgtgcacttctacacgcgggcgcaagccttcaacaacgccatc
cgcctgtgcaaggagaatggcctggacgaccagctcatgaacctggctctgctgagctcc
cctgaggatatgaccgaggcggcgctctactacgaagacaagggcgagcacatggacagg
gcggtcatgctgtaccacaaggccggccacttctccaaggccctggagctggccttcgcc
acccagcagttcgtggctctgcagctcatagcagaggacctggacgagaggtcggacccc
gccctcctggcccgctgttcggatttcttcatcgagcacagccagtacgagaaggcggtg
gagctgctgctggctgcaaagaagtatcacgaagccctgcggctttgcctggagcagaac
atgaccatcaccgaggagatggccgaaaagatgaccgtgtccaaggactccaaggacctg
tctgaagagtcccggcgccagctgctggagcagattgcgaactgctgcatgcgccaaggc
aactaccacctggcgaccaagaagtacacgcaggcagggaacaagctgaaggccatgaga
gcactgctgaagtctggggacacggagaaaatcgtgttctttgcaggcgtctcgaggcaa
aaggaaatctacatcatggctgccaactacctgcagtccctggactggcagaaggagccg
gagatcatgaagaacatcatcagcttctacaccaaggggcgcgccctagaccttctggcc
ggcttctacgatgcctgtgcccaggtggagatcgatgagtaccagaactacgacaaagcc
cacggggcgctgaccgaggcccacaagtgcctctccaaggccaaggctcagagccccctg
gatcaggagaccaagctggcccagctgcagagcaagatgacgctggtgaagaggttcatc
caggcccgaaggatgtaccccgaggaccccaaggaggcggtgaagcagtgtgagctgctc
ctggaggagccagagctggaaggcaccatccgcatgggggacgtctatggcttcctggtg
cagcactacctgcagggggaggagttccacatggcctacaagtatctggaggagatgcgg
aagcgagtgccctctgccaacatgtcctactacgtgaaccagcggactgtggacgccgtg
caccagggcctgggcatccctctcatgcacactgtgccagagcgggtccaccacaacagc
gcagaggaccataaggaaatggacgaagaggtgctggaggaggtggagaacgacccctga
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integrated database retrieval system
