Canis lupus familiaris (dog): 490414
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Entry
490414 CDS
T01007
Symbol
SMG5
Name
(RefSeq) protein SMG5 isoform X8
KO
K11125
protein SMG5
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
490414 (SMG5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfa03019
]
490414 (SMG5)
03032 DNA replication proteins [BR:
cfa03032
]
490414 (SMG5)
Messenger RNA biogenesis [BR:
cfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
490414 (SMG5)
mRNA cycle factors
Common to processing body (P body) and stress granule
490414 (SMG5)
DNA replication proteins [BR:
cfa03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
490414 (SMG5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
490414
NCBI-ProteinID:
XP_022276969
Ensembl:
ENSCAFG00000016839
VGNC:
46555
LinkDB
All DBs
Position
7:41086046..41112528
Genome browser
AA seq
1046 aa
AA seq
DB search
MSQGPPPGESSEPEAKVLHTKRLYRAVVEAVHRLDLILCNKTAYQEVFKPENISLRNKLR
ELCVKLMFLHPVDYGRKAEELLWRKVYYEVIQLIKTNKKHIHSRSTLECAYRTHLVAGIG
FYQHLLLYIQSHYQLELQCCIDWTHVTDPLIGCKKPVSASGKEMDWAQMACHRCLMYLGD
LSRYQNELAGVDTELLAERFYYQALSVAPQIGMPFNQLGTLAGSKYYNVEAMYCYLRCIQ
SEVSFEGAYGNLKRLYDKAAKMYHQLKKCETRKLSPSKKRCKDIKRLLVNFMYLQSLLQP
RSSPVDSELTSLCQSVLEDFNLCLFYLPSSPSLSLASEGEEDYESGYAFLPDLLIFQMII
ICLMGVHSLKRAGSKQYSAAIAFTLALFSHLVNHVNIRLQAELEEGENPVPAFQSDGTDE
PLEKEEAPGPEPPPAVPQATEVRKSRKFSRLSCLRRRRHPPKAGDDSDLSEGFESDSSHD
SARASEGSDSGSDKSLEGGGTAFDAETDSEMNSQESRSDLEDIEDEEGTRSPALEPPRPR
SEAPESLNGPLGPSEASIASNLQAMSTQMFQTKRCFRLAPTFSNLLLQPSTEPHTVANRR
SCVNGDADKPSEPELCSRVQAGRLCPPAWGRSPMPRACCSSQLCLPLPASEEGSESEGSE
SSGHSCRNERSVQEKLQVLAAEGLLPAVKVFLDWLRANPDLIVVCAQSSQSLWNRLSVLL
NLLPAAGELQESGLALCPEVQDLLEGCELPDLPSSLLLPEDTALRNLPPLRAAHRRFNFD
TDRPLLNSLEESVVRICCIRSFGHFIAHLQGSILQFSAEAGIFVSIAQSEQEGVLQQAQA
QFRMAQEEARRNRLMRDMAQLRLQLEVSQLEGSLQQPKAQSAMSPYLVPDTQALCHHLPV
IRQLATSGRFIVIIPRTVIDGLDLLKKEHPGARDGIRYLEAEFKKGNRYIRCQKEVGKSF
ERHKLKRQDADAWTLYKILDSCKQLTLAQGAGEEDPSGMVTIVTGFPLDNPSALSGPMQA
ALQAATHASVDIKNVLDFYKQWKEIG
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaggcccccccccaggggagagcagcgagcccgaggcgaaggtcctccatacc
aagcggctttaccgggctgtggtggaggctgtgcatcgactcgacctcatcctttgcaac
aaaactgcttatcaagaagtgtttaaaccagagaacattagcctgaggaacaagctgcgt
gagctctgcgtcaagcttatgttcctgcacccagtagactatgggagaaaggctgaggag
ctgctgtggagaaaggtgtactacgaagttattcagcttatcaagacgaataagaagcac
atccacagccggagcaccttggaatgtgcctacaggacgcacctggttgctgggattggc
ttctaccagcatctgctgctctacatccagtcccactaccagctggagcttcagtgctgc
atcgactggacccatgttactgatcccctcataggatgcaagaagccagtgtctgcatca
gggaaggagatggactgggcacagatggcctgccaccgatgtctcatgtacctgggggat
ttgtcacgatatcagaatgaattagctggcgtagacactgagctgctagctgagagattt
tactaccaagccctgtctgtagctccccagatcggaatgccctttaaccagctgggcacc
cttgcaggcagcaagtactacaacgtggaagccatgtactgttacctgcgctgcatccag
tcggaagtgtcctttgagggggcctatgggaatctcaagcggctgtatgacaaggcagcc
aagatgtaccaccagctgaagaagtgtgagactcggaaactctctcccagcaagaaacgc
tgtaaagacatcaagaggttgctggtaaacttcatgtaccttcaaagcctcctgcagccc
aggagcagcccggtggactcagagctgacctcactctgccagtcagtcctggaggacttc
aatctctgcctcttctacctgccatcctcacccagcctcagcctggccagtgagggtgaa
gaggactatgaaagtggctatgccttcctcccagacctcctcatctttcagatgatcatc
atttgtctcatgggtgtgcatagcttgaagagagcagggtccaaacagtacagtgcagcc
attgcctttaccctggccctcttctcccacctcgtcaaccatgtcaatatacggctgcag
gctgagctggaggagggtgagaatcccgtgccggcgttccagagcgatggcacagatgag
cccttggagaaggaggaggcaccggggcctgagccccctcctgcagtacctcaagcgact
gaggtcagaaagagccggaagttctctcgcctctcctgcctccgccgccgccgccaccca
cccaaagctggagatgacagtgacctgagtgaaggctttgaatcagactcgagccatgac
tcagccagggccagtgagggctcagacagtggctccgacaagagtctcgaaggtggggga
acagcctttgatgctgagacagactcagaaatgaacagccaagagtcccggtcagacctg
gaagacattgaggatgaggagggtactcggtccccagccctggagccccctcggcccagg
tcagaggctcccgagtctctcaatggcccactgggccccagtgaggcgagcattgccagc
aatctacaggccatgtccacgcagatgttccagaccaagcgctgcttccgactggcgccc
accttcagcaacctgctcctccagccttccactgagccccacactgtagccaaccgcagg
tcatgtgtcaatggagatgcagacaagccttcggaaccagaactctgctccagagtgcag
gcagggcgattgtgccctccagcttggggccgaagcccaatgccacgtgcctgctgttca
tcccagctctgtctcccactcccagcctccgaggagggctccgagtcggagggcagtgaa
tctagtgggcactcctgtcggaatgagcgcagtgtccaggagaagctgcaagtcctggca
gccgaaggcctgcttcctgctgtgaaggtcttcctggactggctgcgggccaaccctgac
ctcatcgttgtgtgtgcacagagctctcaaagtctgtggaatcgcctgtctgtgttgctg
aacctgttgccagctgctggtgagctccaagagtctggcctggccctgtgtcccgaggtc
caggacctacttgaaggttgtgaactgcctgacctgccctccagtctgctgctcccagag
gacacggcccttcgtaacctgcctcccctccgggctgcccatagacgcttcaactttgac
acagaccggcccctgcttaactccttagaggagtcagtcgtgcgcatctgctgcatccgc
agctttggacacttcatcgcccacctgcagggcagcatcctgcagttcagcgcagaggct
ggcatctttgtcagcatcgcccagtctgagcaggagggcgtgctgcagcaggcccaggcg
cagttccgcatggctcaggaagaggcccgtcggaacaggctgatgagagacatggcccag
ctgcgacttcagctcgaggtctctcagctggaagggagcctgcagcagcccaaggcccag
tcagcaatgtctccttacctcgtcccggacacccaggccctctgccaccacctcccggtc
atccgccagctggccaccagcggccgcttcattgtcatcatcccaaggacagtgattgat
ggcctggatttgctgaagaaggaacacccaggggcccgggatgggatccgttacctggag
gcagagtttaagaaaggaaacaggtacattcgctgccagaaagaagtaggaaagagcttc
gagcggcataagctgaagaggcaggatgcagatgcctggacgctctataagatcctagac
agctgcaaacagttgactttggcccagggggcaggcgaggaggacccaagcggcatggtg
accatcgtcacaggctttccactggacaaccccagtgcgctctcaggccccatgcaggca
gccctgcaggccgctacacatgccagtgtggacatcaagaatgttctggacttctacaag
cagtggaaggagattggttga
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integrated database retrieval system
