Canis lupus familiaris (dog): 491184
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Entry
491184 CDS
T01007
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04082
Neuroactive ligand signaling
cfa04721
Synaptic vesicle cycle
cfa04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
491184 (SLC6A4)
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
491184 (SLC6A4)
04721 Synaptic vesicle cycle
491184 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cfa02000
]
491184 (SLC6A4)
Transporters [BR:
cfa02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
491184 (SLC6A4)
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GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
491184
NCBI-ProteinID:
NP_001104241
Ensembl:
ENSCAFG00000018990
VGNC:
46465
UniProt:
Q33E87
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Position
9:complement(43375681..43398433)
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AA seq
630 aa
AA seq
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METTALNSQKELSACKDKEDCQENGVLQQGVPVPEDKVESGQISSGYSAVPSPGAGDDPQ
HSIPAATTALVAEVHQGEREAWGKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLP
YTIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIM
AWALYYLISSFTDQLPWTSCKNSWNTGNCTNYFSGDNITWTPHSTSPAEEFYMRHVLQLH
RSNGLQDLGGISWQLTLCIMLIFVVIYFSIWKGVKTSGKVVWVTATFPYIILSVLLVRGA
TLPGAWRGVLFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSKVAKDAGPSLLFITYAEAIANMPAS
TFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHIWSKRREWFVLCVVITCFFGSLVT
LTFGGAYVVKLLEEYATGPAVLTVALIEAVAVYWFYGITQFCSDVKEMLGFSPGWFWRIC
WVAISPLFLLFIICSFLMSPPQLRLFQYNYPQWSIILGYCIGTSSFICIPTYITYRLVTT
PGTFKERIIRGITPETATEIPYGDIHLNAI
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccacagccttaaattcccagaaggagctatcagcatgtaaggataaagaagac
tgtcaggaaaatggagttctacagcagggtgtccctgtccccgaggataaggtggagtct
ggccaaatctccagtgggtactcagcagttccaagccctggtgcaggagatgaccctcag
cactccattccagctgccaccacagccctagtggccgaagttcatcaaggggaacgagag
gcctggggcaagaagatggatttcctcctgtcggtcattggctatgccgtggacctgggc
aacgtctggcgcttcccctacatatgttaccagaatggagggggggcattccttctcccc
tacactatcatggccatttttggggggatcccgctgttctacatggagctcgcgctgggc
cagtaccaccgaaatggatgcatttcaatatggaggaaaatctgcccgattttcaaaggg
atcggttatgccatctgcatcattgccttctacattgcctcctactacaacaccatcatg
gcctgggcactctactacctcatttcgtccttcacggaccagctgccctggaccagctgc
aagaactcctggaacactggcaactgcaccaactacttttccggggacaacatcacctgg
acgccccactcaacatcccctgcagaagaattttacatgcgccacgtcctgcagctccat
cggtctaatggacttcaggacctgggtggcatcagctggcagctcaccctctgcatcatg
ctgatcttcgttgttatctacttcagtatctggaaaggtgtcaaaacatctggcaaggtg
gtatgggtgacagccaccttcccttatatcatcctttctgtcctgctggtaaggggggcc
accctccctggagcctggaggggtgttctcttctacttgaaacccaactggcagaaactc
ctggagacaggggtgtgggtggatgctgctgctcagatcttcttctctcttggtcctggc
tttggggttttactggcttttgctagctacaacaaattcaacaacaattgttaccaagac
gccctggtgaccagtgtggtgaactgtatgacgagcttcgtgtcaggatttgtcatcttc
acagtgctcggatatatggctgagatgaggaacgaagatgtgtctaaggtggccaaagat
gcaggccccagcctcctcttcatcacatatgcagaagccatagccaacatgccagcatcc
acattctttgctatcatcttcttcctgatgttgatcacactgggcctggacagcactttt
gcaggcttggagggggtgatcacagctgtgctagatgagtttccacacatctggtccaag
cgccgggagtggtttgtgctttgtgtggtcattacctgcttctttggatccctggtcacc
ctgacctttggcggggcatacgtggtgaagctgctggaggagtacgccacagggcccgca
gtgctcaccgttgcacttatagaggcagttgctgtgtattggttttatggcatcactcag
ttctgcagtgacgtgaaggaaatgcttggcttcagccctggatggttctggaggatctgc
tgggtagccatcagccctctgtttctcctgttcatcatttgtagttttttgatgagccca
ccacagctacgacttttccaatataattatccgcagtggagtatcatcctgggttactgc
ataggaacctcatctttcatctgcatccccacatatataacttaccggctggtcaccact
ccagggacatttaaagagcgtattattagaggcattactccagaaactgcgacagaaatt
ccttatggggacatccatttgaatgccatataa
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