Canis lupus familiaris (dog): 491307 Help Entry 491307            CDS       T01007                                  Symbol NUP188 Name (RefSeq) nucleoporin NUP188   KO K14311   nuclear pore complex protein Nup188 Organism cfa  Canis lupus familiaris (dog) Pathway cfa03013   Nucleocytoplasmic transport cfa05014   Amyotrophic lateral sclerosis Brite KEGG Orthology (KO) [BR:cfa00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     491307 (NUP188)  09160 Human Diseases   09164 Neurodegenerative disease    05014 Amyotrophic lateral sclerosis     491307 (NUP188)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cfa03019]     491307 (NUP188) Messenger RNA biogenesis [BR:cfa03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Nuclear pore complex      491307 (NUP188) SSDB OrthologParalogGFIT Motif Pfam:  Nup188_N-subdom_III Nup188_N Nup188_SH3-like TRS130_4HB Gar1 Motif Other DBs NCBI-GeneID:  491307 NCBI-ProteinID:  XP_005625319 Ensembl:  ENSCAFG00000020013 VGNC:  44048 LinkDB All DBs Position 9 Genome browser AA seq 1750 aa AA seqDB search MAAAAGGQCVRSSRELWTILLGRSALRELNQIEAELNKHWQRLLEGLSYYKPPSPNSAEK VKANKDVASPLKELGLRISKFLGLDEEQSVQLLQCYLQEDYRGTRDSLKTVLQDERQSQA LILKIADYYYEERTCILRCILHLLTYFQDERHPYRVEYADCVDKLEKELVIKYRQQFEEL YKTEAPTWETHGNLMTERQVSRWFVQCLREQSMLLEIIFLYYAYFEMAPSDLLALTKMFK EQGFGSRQTNRHLVDETMDPFVDRIGYFSALILVEGMDIESLHKCALDDRRELHQFAQDG LICQDMDRLMLTFGDIPHHAPVLLAWALLRHTLHPEETSSVVRKIGGTAIQLNVFQYLTR LLRSLASGGNDCTTSTACMCVYGLLSFVLTSLELHTLGNQQDVIDTACEVLADPSLPELF WGTEPTSGLGIILDSVCGMFPHLLSPLLQLLRALVSGKSTAKKVYSFLDKMSFYNELYKH KPHDVVSHEDGTLWRRQTSKLLYPLGGQTNLRIPQGTVGQVVLDDRAYLVRWEYSYSSWT LFTCEIEMLLHVVSTADVIQHCQRVRPIIDLVHKVISTDLSIADCLLPITSRIYMLLQRL TTVISPPVDVIASCVNCLTVLAARNPAKVWTDLRHTGFLPFVAHQVSNMSQMISAEGMNA GGYGSLLMNSEQPQGEYGVTVAFLRLITTLVKGQLGSTQSQGLVPCVMFVLKEMLPGYHK WRYNSHGVREQIGCLILELIHAILNLCHEADLHGSPSLQSLCICSLAYTEAGQTVINIMG VGVDTIDMVMAAQPRSDGAEGQGQGQLLIKTVKLAFSVTNNVIRLKPPSNVVSPLEQALT QHGAHGNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGNDAAAIRDAFL TRLQSKIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSNGSKEFSLGVWSCLHAV LELIDSQQQDRYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFGTLS PPSETSEPSILETCALIMKIICLEIYYVVKGSLDQSLKDTLKKFSSEKRFAYWSGYVKSL AVHTADTEGSSCTSLVEYQMLVSAWRMLLIIATSHAEVMHLTDSAVRHQLLLDVLDGTKA LLLVPGSVNCLRLGSMMCTLLLILLRQWKKELGSVDEILGPLTEILEGVLQADQQLMEKT KAKMFSAFITVLQMKEMRVSDIPQYSQLVLNVCETLQEEVIALFDQTRHSLASGGATEDK DSMETDDCSRPRHKDQRDGVCVLGLHLAKELCEVDEDGDSWLQVTRRLPILPTLFTTLEV SLRMKQNLHFTEASLHLLLTLARTQQGATAVAGAGITQSICLPLLSVYQLSSNGTVQTPS TSRKSVDAPSWPGVYRLSMSLMERLLKTLRYNFLTEALDFVGVHQERTLQCLSAVRTVQS LACLEEADHTVGFILQLSNFMKEWHFHLPQLMRDVQVSLGYLCQACTSLLHSRKMLQHCL QNKNGDGVPSAVAPRVQRLPAAAPAPFSCSSSSKQPTADTEASEQRALHTVQYGLLKILS RTLAALRHFTPDVCQILLDQSLDLAEYNFLFALSFTTPTFDSEVAPSFGTLLATVNVALN MLGELDKKKEPLTQAVGLSTQAEGTRTLKSLLMFTMENCFYLLISQAVRYLRDPAVHPRD KQRMKQELSSELSTLLSSLSRYFRRGAPSSPAAGVLPSPQGKSTSLSKASPESQEPLIQL VQAFVRHVQR NT seq 5253 nt NT seq  +upstreamnt  +downstreamnt atggcggcggccgccggcgggcagtgtgtgaggagcagccgggaactatggacaattctg cttggaaggtcagctctgagagaactgaatcagatcgaggcagaactgaataaacattgg cagcggctcttagaagggctgtcctactataaaccacccagtccaaattcagctgaaaaa gtgaaagctaataaagatgtggcttcaccgttgaaggagctgggtttaagaatcagcaag tttttgggtcttgacgaagaacagagtgtgcagttactccagtgttaccttcaagaggat tatagaggtacccgtgactcactaaagacagtactacaagacgagaggcagagccaggcc ttaatcttgaagattgcagattattactatgaagaaagaacctgtattcttcgttgtatt ttacaccttctcacttatttccaagatgaaagacacccctatagggttgaatatgcagac tgtgttgataaattggagaaggaactagttataaaatacagacagcagtttgaagagctt tataaaaccgaagcaccaacatgggagacacatggaaatctcatgactgagcgccaggtg tctcgctggtttgttcaatgccttcgggaacagtccatgctgctggaaattattttcctt tattatgcgtactttgagatggcacctagtgacctgttggcattaaccaagatgtttaaa gagcaaggatttggtagtaggcagaccaacaggcacctggtagatgaaaccatggatcct tttgtggatcgaattggctacttcagtgcccttatcctggtggaaggcatggatattgaa tccttgcataagtgtgctttggatgaccgaagagaactgcaccagtttgcccaggatggg cttatttgtcaggatatggaccgtttgatgttgacctttggggacattccacatcatgcc ccagtgcttttggcctgggctcttctccgtcacaccctgcatccagaagagacaagcagt gttgtccggaagataggtggcacagccatccagctgaatgtctttcagtacctgacccga ctgctccgctcactggccagtgggggaaatgattgtaccaccagcactgcatgcatgtgt gtctacggactcctttctttcgttctgacctcactggagctgcacacactgggcaatcag caggatgtaatagacacagcatgtgaagtcctggcagacccttctcttccagaactattc tggggaacagagccgacctctgggcttgggatcattctggacagtgtatgtgggatgttc ccccatctcctctccccactcctgcaattgctacgagccctcgtgtcagggaagtccact gccaaaaaggtgtatagtttcttggataagatgtctttctacaatgaactttataagcac aagccccatgatgtggtctcccacgaagatggaacactctggcggaggcaaacgtccaaa ctcctttatcctcttgggggtcagaccaacctccgcatacctcagggcactgtgggccaa gtggtactggatgacagggcttacctggtacgctgggagtactcgtacagcagctggacc ctctttacctgtgagattgaaatgctgctgcatgtcgtttccaccgcagatgtaatccag cactgccagcgggtcagacccatcattgatctggtccataaggtcatcagcacagatctg tccatagcagactgtctcttgcccatcacgtctcgcatctacatgctgctgcagcggcta acgaccgtgatctccccaccagtggatgtcattgcttcttgtgtcaactgcttgactgtt ttggctgcccggaacccagcaaaggtctggactgatcttcgtcacacaggctttttacct ttcgtggcccaccaggtctccaacatgagtcagatgattagcgctgaggggatgaatgct ggagggtacggaagcctcttgatgaacagtgagcagccccagggcgagtacggggtcact gttgcctttctgcgcttaatcaccactcttgtcaaggggcagcttggcagtacccagagt caagggctggtgccttgtgtcatgtttgtgctgaaagagatgcttcccggctatcacaag tggcgttacaactcccatggtgtgagagaacagattggttgcctgatcctggagctgatt catgcgatcctgaacctgtgccatgaggccgacctacatggcagccccagtcttcagtct ctctgcatctgcagcctggcctacacagaggcgggacagacagtcattaatatcatgggc gtcggtgtggacaccattgacatggtgatggctgctcagccccgcagcgatggggcagag ggccaggggcagggccagctgctgatcaagacagtgaaactggcattctccgtcaccaac aatgttattcggctgaaaccgccttctaatgtggtgtcccccctggagcaggctctcaca cagcatggtgcccatgggaacaacctcattgctgttcttgccaaatacatctaccacaaa catgatcctgctttgccacgtcttgccatccagctgctgaaacgtctggccacggtggcc ccaatgtcagtatatgcctgcctgggcaatgatgcggccgccattcgagatgccttcctg acccgactgcagagcaagattgaggacatgcgcatcaaagtcatgattctggagttccta acagttgcagtagagactcagcctggcctcattgagctgtttctgaatctggaggtgaag gatggcagcaatggctccaaggaattcagccttggggtgtggagctgcctccatgcggtg ctggagctgatagattcccagcagcaagaccgctactggtgtcccccacttctgcatcgg gcagccattgcctttctgcatgccctgtggcaggaccggcgcgatagtgccatgctggtc ctcagaaccaaacccaagttttgggagaatttaaccagtccgctgtttggaaccctttct cctccctcagaaacatctgagcccagcatcctggagacctgtgccctcatcatgaagata atttgcttggagatatactatgtagttaagggctcattagatcagtcattaaaagataca cttaagaaattttccagcgagaaacgctttgcctactggtcaggctacgtcaagtctttg gcggttcacacagctgacaccgagggcagcagctgcacctccctggtggagtatcagatg ctggtctccgcctggaggatgctcctcatcatcgccaccagtcacgcagaggtaatgcac ttgactgattctgcagtgcgtcaccagctccttctcgacgtgcttgatgggaccaaagcg ttactactggtcccaggctctgtgaactgcctccgccttggctccatgatgtgcacgctg ctgctcatcctcctccggcagtggaagaaggagttaggttctgtggatgaaatccttggg cccttgacggagattctagagggagtgctgcaggcagaccaacaactcatggagaagacc aaggccaagatgttctcagcattcatcacagtgttgcagatgaaggagatgcgagtgagt gacatcccccagtattcccagctggtgctgaacgtctgcgagacgctccaggaagaggtg attgctctcttcgaccagacccgccatagtctggcatcaggcggtgccacagaggataag gacagcatggagacggatgactgctcacggccgcggcacaaggaccagcgtgatggggtg tgtgtcttgggcctgcacttggccaaggagctgtgtgaggtggatgaggatggtgactcg tggctccaggtgactcgcaggctccccatcctgcccaccctcttcaccactctggaggtg agcctgcgcatgaagcagaacctgcatttcaccgaggcatcgctgcacctgctcctcact ctggctcgcactcagcagggagccacagcagtagctggagctggcatcacccagagcatc tgtctgcccctcctgagtgtgtaccagcttagctccaatgggacagtgcagacacctagc acctctcggaagtccgtggatgccccctcttggccaggagtctaccgcctatccatgtct ttgatggagcggctcctcaaaactctgcgctacaacttcctgaccgaggccctggacttc gtgggtgttcaccaggagcggaccttacagtgcctcagcgcagtgaggacagtgcagagt ctggcctgcttggaggaggcagaccacactgtgggcttcattctgcaactctccaatttc atgaaggaatggcacttccacctgcctcagcttatgcgggatgtccaggtcagcctgggg tacctgtgccaggcctgcacgtcgctcctgcacagccgcaagatgctgcagcactgcttg cagaacaaaaatggggacggcgttccctcagctgttgccccccgtgtccagcggctcccc gctgctgcccccgctcccttctcctgctcctcctcctccaagcagcccactgctgacacc gaggcctccgagcagcgagccttacataccgtccagtatggacttctcaagatcctcagc aggaccctggcggccctgcgccacttcaccccggatgtctgccaaatcctgctggaccag tctctggacctcgctgaatacaacttcctatttgccctgagctttaccactcccaccttt gactctgaagtggccccctccttcgggacccttctggccacagtgaatgtggccctaaac atgctcggagagctggataagaagaaggagccgctcacccaggctgtggggctcagcaca caggcagaggggaccaggacactgaagtccctcctgatgttcaccatggagaactgcttc tacctgctcatctctcaggccgtgcgctaccttagggacccagctgtgcatccccgggac aaacagcggatgaagcaggagctcagctcggagttgagcacgctgctctccagcctctcc cgctacttccgccggggggcccccagctccccggctgctggcgtcctcccctcgcctcag ggcaagtccacgtctctctccaaggccagcccagagagccaggagcctctgatccagctg gtgcaggccttcgtgcggcacgtgcagagatag

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