Canis lupus familiaris (dog): 491344 Help Entry 491344            CDS       T01007                                  Symbol RC3H2 Name (RefSeq) roquin-2 isoform X1   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism cfa  Canis lupus familiaris (dog) Brite KEGG Orthology (KO) [BR:cfa00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:cfa03000]     491344 (RC3H2)    04121 Ubiquitin system [BR:cfa04121]     491344 (RC3H2) Transcription factors [BR:cfa03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     491344 (RC3H2) Ubiquitin system [BR:cfa04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     491344 (RC3H2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-CCCH zf-RING_UBOX zf-RING_2 zf-CCCH_4 Prok-RING_4 zf-C3HC4 zf_CCCH_4 zf-CCCH_UNK zf-C3HC4_4 Xin zf-C3HC4_2 Motif Other DBs NCBI-GeneID:  491344 NCBI-ProteinID:  XP_013972558 Ensembl:  ENSCAFG00000032522 LinkDB All DBs Position 9:59076857..59138347 Genome browser AA seq 1189 aa AA seqDB search MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD IDVLPVNFALLQLVGAQVPDHQSIKLSNLGENKHYEVAKKCVEDLALYLKPLSGGKGVAS LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI DPNPDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR QQGGCPRGTNCTFAHSQEELEKYRLRNKKINATVRTFPLLNKVGVNNTVTTTAGNVISVI GSTETTGKIVPSTNGISNAENNVSQLIPRSTDSTLRALETVKKVGKVGTNGQNATGPSAE SVTENKIGSPPKTPVSNVVATSAGPSNVGTELNSVPPKSSPFITRVPVYPQHSENIQYFQ DPRTQIPFEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASMPYADHYST FSPRDRMNSSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPPMYQRDDIIRSNSLPPM DVMHSSVYQTSLRERYNSLDGYYSVACQPPSEPRTSVPLPREPCGHLKTSCEEQIRRKPE QWAQYHTQKTPLVSSTLPVATQSPTPPSPLFSVDFRTDFSESVSGTKFEEDHLSHYSPWS CGTIGSCINAIDSEPRDVIANSNAVLMDLDSGDVKRRVHLFETQRRTKEEDPIIPFSDGP IISKWGAISRSSRTGYHTTDPVQATASQGSATKPISVSDYVPYVNAVDSRWSAYGNEATS SAHYIERDRFIVTDISGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLDE GRHLSLNLLSKEIELRNGESDYTEDASDTKPDRDIELELSALDTDEPDGQGEQIEEILDI QLGISSQNDQLLNGTAVENGHPVQQHQKEPLEQKRQSLGEDHVILEEQKTILPVTSCFSQ PLPVSIGNASCLPITTSVSVGNLILKTHVMSEDKNDFLKPVANGKMVNS NT seq 3570 nt NT seq  +upstreamnt  +downstreamnt atgcctgtgcaggcagctcaatggacagaatttctgtcctgtccaatctgctataatgaa tttgatgagaatgtgcacaaacccatcagtttaggttgttcacacactgtttgcaagacc tgcttgaataaacttcaccgaaaagcttgtccttttgaccagactgccatcaacacagac attgatgtccttcctgtcaactttgcactcctccagttagtgggagcccaggtaccagat catcagtcaataaagttaagtaatctaggtgagaacaaacactatgaggttgcaaagaaa tgtgttgaggatttggcactctacttgaaaccactaagtggaggtaaaggtgtagctagt ttgaatcagagtgcactgagccgtccaatgcaaaggaaactggtgacgcttgtaaactgt caactggtggaggaagaaggtcgtgtaagagccatgcgagcagcccgttcacttggagaa agaactgtaacagaactaatattacagcaccagaatccccagcaattgtctgccaacctg tgggctgctgtcagggctcgaggatgccagtttctaggaccagctatgcaagaagaggcc ttaaagctggtgttgctagcattagaagatggttctgctctctcaaggaaagtactggta ctttttgttgtgcaaagactagaaccaagatttcctcaggcatcaaaaacaagtattggt catgttgtgcaactactgtatcgagcttcatgttttaaggttaccaaaagggatgaagac tcttccttgatgcagctaaaggaggaatttaggagttacgaagcattacgcagagaacat gatgcccaaattgttcatattgcaatggaagcaggactccgcatttcacctgagcagtgg tcctcacttctgtatggtgacttggcacataaatcacacatgcagtctatcattgataag ctgcagtctccagaatcatttgcaaagagtgtccaggaattgacaattgttttgcaacga acaggtgacccagctaacttaaatagactgaggcctcatttagaacttcttgcaaacata gaccctaatccagatgctgtttcaccaacttgggagcagctagaaaatgcaatggtagct gttaaaacagtggttcatggccttgtggacttcatacaaaattatagtagaaaaggccat gagacacctcagcctcagcctaacagcaaatacaagactagcatgtgccgagacctgcgt caacaaggaggatgtccccgaggaacaaactgtacttttgcccattctcaggaagagctt gaaaagtatcgattaaggaacaaaaagatcaatgcaactgtaagaacatttcctcttcta aataaagttggtgtaaacaacactgtcacaaccacagccggaaatgtcatttctgtcata ggaagtactgaaacaacggggaaaattgttccaagtacaaacggaatttcaaatgcagaa aacaatgtttcccagctaatcccacgtagtactgacagtacgttaagagctctggagact gtgaagaaagtggggaaggttggcactaatggtcagaatgctactgggccttctgcagag tctgtcactgaaaataaaattggctctccacccaagactcctgtaagtaatgtagtggct acctcagctgggccttctaatgttggaacagagctgaattctgtgcctccaaaatccagc ccatttataactagagtaccagtatatcctcagcattctgaaaatattcagtattttcaa gatccaaggactcagataccctttgaagttccacagtacccacagacaggatactaccca ccacctccaacggtaccagctggtgtggctccctgtgttcctcgctttgtgaggtccaat aatgttccagagtcctccctcccacctgcttctatgccatatgctgatcattacagtaca ttttcccctcgagatcgaatgaattcttctccttaccaacctcctcctccgcagccgtat ggaccagttcctccagtaccttctggaatgtatgctcctgtgtacgacagcaggcgcatc tggcgcccacctatgtaccaacgagatgacattattagaagcaattctttacctccaatg gatgtgatgcactcgtctgtttatcagacgtctttgcgggaaagatataactcattagat gggtattattcagtggcttgtcagccaccaagtgagccaaggacaagtgtgcctttacca agggaaccttgtggtcatttgaagaccagttgcgaggagcagataagaagaaagccagag cagtgggcacagtaccacactcagaaaacacctcttgtctcttcaactcttcctgtggca acacagtcgccaacaccaccttctcctctattcagtgtagactttcgcactgatttctct gagagtgtgagtggtacaaaatttgaagaagatcatctttctcattattctccctggtct tgtggcaccataggctcctgtataaatgccatcgattcagagcccagagatgtaattgct aattcaaatgctgtattaatggatctggacagtggagatgttaagagaagagtgcattta tttgaaactcagagaaggacaaaagaagaagacccaataattccatttagtgatggacct atcatctcaaaatggggtgcaatttccagatcttcacgtacaggttaccataccacggat cctgtccaggccactgcttcccaaggaagtgccactaagcctatcagtgtatcagattat gttccttatgtcaatgctgttgattcaaggtggagtgcatatggtaacgaggccacatca tcagcacactatattgaacgggacagattcattgttaccgatatatctggtcatcgaaag cattccagtactggagaccttttgagcattgaacttcagcaggccaagagtaactcattg cttcttcaaagggaggccaatgctctggccatgcagcagaagtggaattccctggatgaa ggccgtcacctttccttaaatcttctaagcaaagaaattgaactgagaaatggagagagt gattacacagaagatgcaagcgatactaagcctgatagggatattgagttagagctttcg gcacttgatactgatgaacctgatggacaaggggaacaaattgaagagatcctggacata cagcttggtatcagttctcaaaatgatcagttgctgaatggaacagcagtggaaaatggg cacccagtccagcagcaccaaaaggagccgctggagcagaagagacagagtttaggtgaa gaccatgtgattctggaggagcaaaaaacaattctgccggtaacttcttgctttagccag ccactcccagtgtccattggcaatgcaagttgtctccccatcaccacatccgtcagtgtt ggcaacctcattctgaaaactcatgttatgtctgaagataaaaacgactttttaaaacct gttgcaaatgggaagatggttaacagctga

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