Canis lupus familiaris (dog): 492178
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Entry
492178 CDS
T01007
Symbol
SOX3
Name
(RefSeq) transcription factor SOX-3
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfa03000
]
492178 (SOX3)
Transcription factors [BR:
cfa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
492178 (SOX3)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
492178
NCBI-ProteinID:
XP_852934
Ensembl:
ENSCAFG00000019026
VGNC:
46679
UniProt:
A0A8C0SIP7
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Position
X:complement(96180957..96183063)
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AA seq
444 aa
AA seq
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MRPARDVASGASGLRVPGDLARSTLASLPFPPDPLARRPPSAPPTESPGLFTVAAPAPGA
PSPPATLAHLLPAPAMYSLLETELKNPVGPPTPAAGAGGPAAAGGAGKSSATAAGGATAG
GGNGGGSSGGGGGSDQDRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWKLL
TDAEKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKTLLKKDKYSLPGGLLPPGAAAAAAA
AAAAAAASSPVGVGQRLDTYTHVNGWANGAYSLVQEQLGYAQPATMSSPPPPPALPQMHR
YDMAGLQYSPMMPPGAQSYMNAAAAAAASGYGGMAPSAAAAAAAAYGQQPATAAAAAAAA
AAMSLGPMGTVVKTEPSSPPPAITSHSQRACLGDLRDMISMYLPPGGDAADAASPLPGGR
LHSVHQHYQGAGTAVNGTVPLTHI
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgcggccagctcgagacgtcgcatcaggtgcgagtggcctgcgggttcctggcgacttg
gcgcggagcactttggccagcctgcccttcccgcctgacccgctggcccgccggcccccg
agcgcccctccgacggagtccccaggccttttcaccgtggccgctccagccccgggagcg
ccttctcctcccgccactctggcgcaccttcttcccgccccggccatgtacagcctgctg
gagaccgagctcaagaaccccgtggggccacccaccccagcggccggcgcaggcggcccc
gcagccgccggcggcgcaggcaagagcagcgcgaccgcagccggcggcgcgaccgcaggc
ggcggcaacggcgggggctcgagcggcgggggcgggggcagcgaccaggaccgcgtgaag
cgacccatgaacgccttcatggtgtggtcccgggggcagcggcgcaagatggccctggag
aaccccaagatgcacaactccgagatcagcaagcgcttgggcgccgactggaaactgctg
accgacgccgagaagcggccgttcatcgacgaggccaagcgactgcgcgccgtgcacatg
aaagagtacccggactacaagtaccggccgcgccgcaagaccaagacgctgctcaagaag
gacaagtactcgctgcccggaggcctgctgcccccgggcgccgccgccgccgcggccgcc
gcggccgccgccgccgccgccagcagcccggtgggcgtgggccagcgcctggacacgtac
acacacgtgaacggctgggccaacggcgcgtactcgctggtgcaggagcagctgggctac
gcgcagcccgctaccatgagcagcccgccgccgccgcccgcgctgccgcagatgcaccgc
tacgacatggccggcctgcagtacagccccatgatgccgcccggcgcccagagctacatg
aacgccgccgccgccgccgccgcctcgggctacgggggcatggcgccctcggccgccgcc
gccgcggccgccgcctacgggcagcagcccgccaccgccgccgccgcggccgccgccgcc
gccgccatgagcctgggccccatgggcacggtggtgaagaccgaacccagctcgccgccg
cccgccatcacatcgcactcgcagcgcgcgtgcctcggcgacctgcgcgacatgatcagc
atgtacctgccacccggcggggacgcggccgacgccgcctcgccgctgcccggcggccgc
ctgcacagcgtacaccagcactaccagggcgcggggactgccgtcaacggaaccgtgccg
ctgacccacatctga
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