Canis lupus familiaris (dog): 492244
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Entry
492244 CDS
T01007
Symbol
L1CAM
Name
(RefSeq) neural cell adhesion molecule L1 isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04360
Axon guidance
cfa04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
492244 (L1CAM)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
492244 (L1CAM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cfa04515
]
492244 (L1CAM)
04090 CD molecules [BR:
cfa04090
]
492244 (L1CAM)
04091 Lectins [BR:
cfa04091
]
492244 (L1CAM)
Cell adhesion molecules [BR:
cfa04515
]
Immunoglobulin superfamily
L1 family
492244 (L1CAM)
CD molecules [BR:
cfa04090
]
Proteins
492244 (L1CAM)
Lectins [BR:
cfa04091
]
I-type lectins (Siglecs)
492244 (L1CAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_5
Pur_ac_phosph_N
C2-set_3
BiPBP_C
Fndc10
Adeno_E3_CR1
Motif
Other DBs
NCBI-GeneID:
492244
NCBI-ProteinID:
XP_022271562
Ensembl:
ENSCAFG00000019362
VGNC:
42556
UniProt:
A0A8C0T6H7
LinkDB
All DBs
Position
X:complement(107037463..107051578)
Genome browser
AA seq
1256 aa
AA seq
DB search
MAVSLRYLWPLLLCSPCLLIQIPDEYEGYRVMEPPVITEQSPRRLVVFPTDDISLKCEAS
GKPEVQFRWTRDGVHFKPKEELGVTVHQAPHSGSFTITGNNSNFAQRFQGTYRCFASNKL
GTAMSHEIQLMAEGAPKWPKEMVKPVEVEEGESVILPCHPPPSAEPLRIYWMNSKILHIK
QDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPIDLRVKATNSMIDRKP
RLLFPTNSSSHLVALQGQPLVLECIAEGFPTPSIKWLRPSGPMPADRVTYQNHNKTLQLL
NVAEEDDGEYRCLAENSLGSDRHTYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRP
QPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHGLLLANAYIY
VVQLPAKILTPDNETYMAVEGSTAYLLCKAFGAPVPSVQWLDKEGKTVLQDERFFPYTNG
TLGIRDLQANDTGHYFCQAANDQNNVTIVANLQVKDATQITQGPQSAIEKKGSKVTFTCQ
ASFDPSLQHSITWRGDGRNLQEFGDSDKYFIEDGRLVIHSVDYSDQGNYSCVAGTELDMV
EGRAELLVVGSPGPVPHLELSDRHLLKQSQVRLSWRPAEDHNAPIEKYDIEFEDKEMAPE
KWYSLGKVPGNQTSTTLKLSPYIHYTFRVTAINKYGPGEPSPASETVVTPEAAPEKNPVD
VKGEGNETSNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGAWQEQIVSDPLLVVSNTST
FVPYEIKVQAVNSQGKGPEPQITIGYSGEDYPQASPEMEGIKILNSSAVLVRWWPVDPAQ
VKGHLRGYNVTYWWEGSQRRHSKRHVHRGHVVVAANTTSAVLGGLRPYSSYRLELRAFNG
RGLGPASEMTFSTPEGVPGHPEALHLECQSDTSLLLHWQPPLSHNGVLTGYVLSYHPLDD
GDKEQLSFDLPDPELRTHNLTNLSPHLRYRFQLQATTKEGPGEAIVREGGTMALSGTPDF
GNISAMAGENYSVVSWVPKEGQCNFGFQIWFKALGDEKMGPHLPPQYVSYNQSSYTQWDL
QPDTDYEIHLLKERVLLKMAVKTNGTGRVRLPPAGFATEGWFIGFISAIILLLLILLILC
FIKRSKGGKYSVKDKEDTQVDSEARPMKDETFGEYRSLESDNEEKAFGSSQPSLNGDIKP
LGSDDSLADYGGSVDVQFNEDGSFIGQYSGKKEKEAAGGNDSSGAASPINPAGALE
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgtcgctgcggtacttgtggcctctccttctctgcagcccctgcctgctcatc
cagatccccgacgaatatgaaggataccgcgtgatggagccacctgtcatcacggaacag
tccccacggcgcctggtcgtcttccccacagatgacatcagcctcaagtgtgaggccagt
ggcaaaccggaagtgcagttccgctggactcgggatggcgtccacttcaaacccaaggaa
gagctgggtgtgaccgtgcaccaggcgccacattctggctccttcaccatcacgggcaac
aacagcaactttgcccagaggttccagggcacctaccgctgctttgccagcaataagctg
ggcacggccatgtcccatgagatccagctcatggccgagggtgcccccaagtggccgaaa
gagatggtgaaacccgtggaggtggaggaaggggagtcggtcattttgccttgccacccg
ccacccagcgccgagccgctgcgcatctactggatgaatagcaagatcttgcacatcaaa
caggatgagcgggtgacaatgggccagaacggcaatctctacttcgccaacgtgctcacc
tcggacaaccactcagactacatctgccatgcccactttcctggcacccggaccatcatc
cagaaggaacccattgacctccgggtcaaggccaccaacagcatgatcgacaggaagcct
cgcctgctcttccccaccaactccagcagccacctggtagccctgcaggggcagccactg
gtcctggagtgcatcgccgagggcttccccacacccagcatcaagtggctgcgccccagt
ggccccatgccagccgaccgagtcacctaccagaaccacaacaagaccctgcagctgctg
aacgtggcagaggaggacgacggcgagtaccggtgcctggccgagaactcgctgggcagc
gaccggcacacctactacgtcacggtggaggctgccccctactggctgcacaagccccag
agccacctgtacggccccggagagactgcccgcctggactgccaagtgcaggggaggccc
caacccgaggtcacctggaggatcaacgggattcctgtggaggagctggccaaggaccag
aagtaccggatccagcgtggggccctgatcctgagcaacgtgcagcccagcgacacgatg
gtgacgcagtgcgaggctcgcaacaggcacgggctcctgctggccaatgcctacatctat
gtcgttcagcttccggccaagatcctgacccctgacaacgagacgtacatggcggtcgag
ggcagcacggcctatcttctgtgcaaggcctttggagctcctgtgcccagtgtccagtgg
ctcgacaaggaagggaagaccgtgctacaggatgaacgcttcttcccctacaccaacggg
accctgggcatccgggacctccaggccaatgacactggccactacttctgccaggctgcc
aacgaccagaacaacgtgaccattgtggctaacctgcaggtcaaagatgccactcagatc
acacaggggccacagagtgcaatcgagaaaaaaggctcaaaagtgactttcacgtgccag
gcctcctttgacccttccttgcagcacagcatcacctggcgaggggacggtcgaaacctc
caggagtttggggacagtgacaagtacttcatagaggacgggcgcctggtcatccacagc
gtggactacagtgaccagggcaactacagctgtgtggccggcaccgagctggacatggtg
gagggcagggcggagctgctggtggtggggagccccgggccggtgcctcacctggagctg
tccgatcgccacctgctgaagcagagccaggtgcgcctgtcctggagacccgccgaggac
cacaacgcccccatcgagaagtatgacattgaatttgaagacaaggagatggcgcctgag
aaatggtacagtttgggcaaggtgcccgggaaccagacctccaccaccctcaagctgtcg
ccctacatccactacacctttagagtgacggccatcaacaaatacggccccggggagccc
agcccagcctctgagactgtggtcacacccgaggcagccccagagaagaaccctgtggac
gtgaagggggaagggaacgagaccagcaacatggtcatcacttggaagccgcttaggtgg
atggactggaatgccccccaggttcagtaccgcgtccaatggcgccctcaggggacacgg
ggtgcctggcaggaacagatcgtgagcgaccccctcctggtcgtgtccaacacctccacc
ttcgtgccttatgagatcaaagtccaggccgtcaacagccagggcaagggccctgagccc
cagattaccatcggctactctggggaagattacccgcaggcaagccctgagatggaaggc
atcaagatcctcaattcgagcgccgtgctggtccggtggtggcctgtggacccagcccag
gtcaagggccacctccgaggatacaacgtgacgtactggtgggagggcagtcagaggagg
cacagcaaaaggcatgtccacagaggccacgtggtggtggccgccaacaccaccagcgcc
gtcctggggggcctgaggccctacagctcctaccgtctggagttgagggccttcaatggc
cgaggactggggcccgccagcgagatgaccttcagcaccccggagggagtgccgggccac
cctgaggcgctgcacctggagtgccagtcggataccagcctgctgctgcactggcagccc
ccgctcagccacaacggcgtgctcaccggctacgtgctctcctaccaccccctggacgac
ggggacaaggagcagctgtccttcgaccttccggaccccgagctgcggacacacaacctg
accaatctgagcccccacctgcgctaccgcttccagctgcaggccaccaccaaggagggc
cccggggaggccatcgtgcgcgagggaggcaccatggccttgtccgggaccccggatttt
ggcaacatctcggccatggctggcgagaactacagcgtggtctcctgggtccccaaggag
ggccagtgcaacttcggcttccagatctggttcaaagccctgggggacgagaagatgggc
cctcacctgccgccgcagtacgtcagctacaaccagagctcctacacgcagtgggacctg
cagcccgacaccgactatgagatccacctgctcaaggagcgggtgctgctgaagatggcc
gtgaagaccaacggcaccggccgcgtgaggctcccgcccgccggcttcgccacggagggc
tggttcatcggcttcatcagcgccatcattctcttgctgctcatcctgctcatcctctgc
tttatcaagcgcagcaaagggggcaaatactcagtgaaggataaggaggacacccaggtg
gactccgaggcccggccgatgaaggacgagaccttcggcgagtacaggtccctggagagt
gacaacgaggagaaggcctttggcagcagccagccgtccctcaatggggacatcaagccc
ctgggcagtgacgacagcctggccgactacgggggcagcgtggacgtgcagttcaacgag
gacggctccttcatcggccagtacagcggcaagaaggagaaggaggcagcaggcggcaac
gacagctcaggggccgcctcccccatcaaccctgccggggccctagagtag
DBGET
integrated database retrieval system
