Canis lupus familiaris (dog): 493995
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Entry
493995 CDS
T01007
Symbol
ERCC2
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD isoform X1
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03022
Basal transcription factors
cfa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
493995 (ERCC2)
09124 Replication and repair
03420 Nucleotide excision repair
493995 (ERCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfa03021
]
493995 (ERCC2)
03036 Chromosome and associated proteins [BR:
cfa03036
]
493995 (ERCC2)
03400 DNA repair and recombination proteins [BR:
cfa03400
]
493995 (ERCC2)
Enzymes [BR:
cfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
493995 (ERCC2)
Transcription machinery [BR:
cfa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
493995 (ERCC2)
Chromosome and associated proteins [BR:
cfa03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
493995 (ERCC2)
DNA repair and recombination proteins [BR:
cfa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
493995 (ERCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
ResIII
DEAD
AAA_22
SesA
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
493995
NCBI-ProteinID:
XP_038282872
Ensembl:
ENSCAFG00000004487
VGNC:
40442
LinkDB
All DBs
Position
1:109658382..109676142
Genome browser
AA seq
760 aa
AA seq
DB search
MKLNVDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQ
RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPE
VMPLRFGKDVDGKCHSLTASYVRAQYQQDSSLPHCRFYEEFDVHGRQVPLPAGIYNLDDL
KALGQRQGWCPYFLARYSILHANVVVYSYHYLLDPKIAELVSKELARKAVVVFDEAHNID
NVCIDSMSVNITRRTLDRCQGNLETLQKTVLRIKETDEQRLREEYRRLVEGLREASAARE
TDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSG
LAQRVCIQRKPLRFCAERLRSLLHTLEIADLADFSPLTLLANFATLVSTYAKGFTIIIEP
FDDRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT
FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFT
SYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVA
RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYF
LRQMAQPFHREDQLGLSLLSLEQLESEETLRRIEQIAQQL
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaacgtggacgggctgctggtctacttcccttacgactacatctacccggag
cagttctcctacatgctggagctcaagcgcacgctggacgccaagggtcatggagtcctg
gagatgccctcaggcactgggaagacagtgtccctgttggcactgatcatggcataccag
agggcatatccactggaagtgactaaactcatctactgctcaagaactgtgcctgagatt
gagaaggtcattgaagagctgcgaaagttgctcaacttctatgagaagcaggagggtgag
aagctgccatttttggggcttgctctgagctcccggaagaacctgtgtattcatcctgag
gtgatgcccttgcgctttgggaaagatgtcgacgggaaatgccacagcctcacagcctcg
tacgtgcgggcgcagtaccagcaggactccagcttgccccactgccgcttctacgaggaa
tttgatgtccatgggcgccaggtgcccctccctgctgggatctacaacctggatgacctg
aaggccctggggcagcgccagggctggtgcccatacttccttgcccgctactcgatcctg
cacgccaatgtggtggtttacagttaccactacctcttggaccccaagattgcagagctg
gtgtctaaggagctggcccggaaggctgtcgtggtctttgatgaggcccacaacattgac
aatgtctgcatcgactcgatgagtgtcaacatcactcgccggacccttgaccgctgccag
ggcaacctggagaccttacagaagacggtgctcaggatcaaggagacagatgagcagcgt
ctgcgggaggagtaccgacgcctggtagaggggctgcgggaggccagtgctgcccgggag
accgatgcccacctggccaaccccgtgcttcctgatgaggtgctacaggaggcggtcccc
ggctccatccgcacggctgaacacttcctgggcttcctacggcggctgctggaatacgtc
aagtggcggctgcgggtacagcacgtggtgcaggagagcccccctgccttcctcagcggc
ctggcccagcgtgtgtgcatccagcgcaagcccctcagattctgtgccgaacgcctccgc
tccctcttgcacaccctggagattgccgatcttgcggacttctctcccctcaccctcctc
gctaacttcgccaccctcgtcagcacctatgccaagggtttcaccatcatcatcgagccc
tttgatgacaggacccccaccattgccaaccccatcctgcacttcagctgcatggatgct
tcactggccatcaaacccgtgtttgagcgtttccagtctgtcatcatcacatctgggacg
ctgtccccactggacatctaccccaagattctggacttccaccccgtcaccatggcaacc
ttcaccatgacgctggcccgggtctgcctctgccctatgatcattggtcgtggcaatgac
caggtggccattagctctaaatttgagacccgggaagatattgcggtgatccggaactat
gggaacctcctgctggagatgtctgctgttgtccctgatggcatcgtggccttcttcacc
agctaccagtacatggagagcaccgtggcttcctggtatgagcagggcattcttgaaaac
atccagaggaataagctgctcttcattgagacccaagatggggctgagaccagcgttgcc
ctggagaagtaccaggaggcctgtgagaatggccgtggagccatcctgctgtcagtggcc
cgaggcaaagtgtccgagggaattgactttgtgcaccactacgggcgggctgtcatcatg
ttcggtgtcccctacgtctacacccagagccgtattcttaaggcacggctggagtaccta
cgtgaccagttccagatccgagaaaatgacttcctcaccttcgatgccatgcgccacgca
gcccagtgtgtgggtcgtgccattcggggcaagacggactatggcctcatggtctttgct
gataagcggtttgcccgggcagacaagcgtgggaaactgcctcgctggatccaggagcac
ctcactgatgccaacctcaacctgactgttgacgagggagtccaggttgccaagtacttc
ctgaggcagatggctcagccattccaccgggaggaccagctgggcctgtccctgcttagc
ctggagcagctggaatcagaagagacgctgcggaggatagagcagattgctcagcagctg
tag
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integrated database retrieval system
