Canis lupus familiaris (dog): 607803
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Entry
607803 CDS
T01007
Symbol
DHX58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58 isoform X1
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
607803 (DHX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cfa04054
]
607803 (DHX58)
Enzymes [BR:
cfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
607803 (DHX58)
Pattern recognition receptors [BR:
cfa04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
607803 (DHX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_19
AAA_22
Terminase_6N
Motif
Other DBs
NCBI-GeneID:
607803
NCBI-ProteinID:
XP_013972040
Ensembl:
ENSCAFG00000015720
VGNC:
39951
UniProt:
A0A8C0LX22
A0A8I3NFT8
LinkDB
All DBs
Position
9:20248380..20256796
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AA seq
678 aa
AA seq
DB search
MELRPYQWEVIMPALEGKNIIVWLPTGAGKTRAAAYVAKRHLETVDQAKVVVLVNRVHLV
TQHCEEFSRMLGKRWAIITLSGDMGPRAGFGHLARSHDLIICTAELLQMALTSPEEEEHV
ELNAFSLLVVDECHHTHKDTVYNLILSRYLEHKLQRTRPLPQVLGLTASPGTGGASTLDG
AIDHILQLCANLDTWHIMSPENHRPQLQEHSAQPCKQYSLCHRRSQDPFGDMLKKLMDRI
HNRLEMPALNRDFGTQTYEQQVVELSQDAAQAGLQQRRVYALHLRRYNDALLIHDTVRAV
DALKSLGDFYDRERATKTQVLQAERWLLALFDDYKNELAHLATQTPENPKLEMLEQILRE
QFGHSDSPRGIIFTQTRQSTHSLLLWLQQQPGLQTVDIRADLLIGAGNSSQNTHMTQRDQ
QEVIRKFRVGTLNLLVATSVAEEGLDIPQCNVVVRYGLLSNEISMVQARGRARAGRSIYS
FVATQGSRELRRELINEVLETLMERAVAAVQKMDQAEYQAKIRDLQQAALVKRAVQAAQR
DNQRQQFLAEQVQLLCVNCMVAVGHGSDLRKVEGAHHVNVNPNFSIYYNVSRGPVVIDRT
FKDWRPGGTIHCRNCGEAWGLQMIYKSVKLPALKVRSMLLETPRGRVQAKKWSRVPFPVP
DFDYLQHCAQNLADLSLD
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcgaccctaccagtgggaggtgatcatgcctgccctggagggcaagaatatc
atcgtgtggctgcccactggagctgggaaaacccgggctgctgcttatgtggccaagagg
catctagagactgtggaccaagccaaggtggttgtactggtcaacagggtgcacctggtg
acccagcattgtgaggagttcagccgcatgctgggcaaacgctgggccattataaccctg
agtggggacatggggccacgagctggctttggccacctggccaggagccatgacctgatc
atctgcacagctgagctgctacagatggcgctgaccagcccggaggaggaggagcacgtg
gagctcaatgccttctccctgctcgtggtggatgagtgtcaccacacgcacaaagacact
gtctacaacctcatcctgagccggtacctagagcataaactccagaggacacggccgctg
ccccaggtgctgggtctcacagcctccccgggcactggcggggcctccacgctcgatgga
gcaattgaccacatcctacagctctgtgccaacctggacacgtggcacatcatgtcaccg
gagaaccatcgcccccagctgcaggaacacagtgctcagccatgcaaacagtacagtctc
tgccataggcgcagccaggacccatttggggacatgctgaagaagctcatggaccgaatc
cacaaccgcctggagatgcccgcgttaaaccgcgactttgggacacagacttatgagcag
caggtggtggagctgagccaggatgcggcccaggccggactccagcagcgccgggtatac
gctcttcacctgcggcgctacaatgatgcgctgctcatccacgacacggtccgcgctgtg
gacgccctgaagtcgctgggagatttctacgacagggagcgcgccacgaagacccaggtc
ctgcaggctgagcgctggctgctggcactgttcgatgattacaagaatgagctggcccac
ctggcaacacagaccccagagaacccaaaactggagatgctagaacagatcctgcgggag
cagtttgggcattccgacagccccaggggcatcatcttcacccagacccgccagagcact
cactccctcctactctggctccagcagcagccaggcctgcagacagtggacattagggct
gacctgctgattggggctggaaatagtagccaaaacacccatatgacccagagagaccag
caagaagtgatccgaaagttccgggttggcactctgaacctcctggtggccacaagtgtg
gcagaagaggggctggacatcccccagtgcaatgtggtggtacgttacgggctcctgtcc
aacgagatctccatggtccaggcaaggggccgggcccgggctggtcggagcatatactca
tttgtggcaacccaaggcagtcgggagctacgacgggagctgataaacgaggtgctggag
actttgatggagcgggccgtggctgctgtgcagaagatggaccaggctgagtaccaggcc
aagatccgagatctgcagcaggcagccctggtcaagagggcagtccaggcagcccagcgg
gacaaccagcggcagcagttcctggccgagcaggtgcagctcctctgtgtcaactgcatg
gtggctgtgggccacgggagtgacctgcggaaggtggagggcgctcaccacgtcaatgtg
aaccccaacttctcgatctactacaatgtctcccgggggccggtggtcattgacagaacc
ttcaaggactggaggcctgggggtaccattcactgcaggaactgtggggaggcctggggc
ctgcagatgatctacaagtcagtgaagctgccggcactcaaagtccgcagcatgcttcta
gagacaccccgagggagagtccaggccaagaagtggtcccgtgtgcccttccccgtgcct
gacttcgactacctgcagcactgtgcccagaacctggcggacctctccctggactga
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