Canis lupus familiaris (dog): 608117
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Entry
608117 CDS
T01007
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like isoform X1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03040
Spliceosome
cfa05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
608117
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
608117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfa03019
]
608117
03041 Spliceosome [BR:
cfa03041
]
608117
Messenger RNA biogenesis [BR:
cfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
608117
mRNA cycle factors
Common to processing body (P body) and stress granule
608117
Spliceosome [BR:
cfa03041
]
Common components
Common spliceosomal components
hnRNP proteins
608117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
PHM7_cyt
RRM_5
Motif
Other DBs
NCBI-GeneID:
608117
NCBI-ProteinID:
XP_038311544
LinkDB
All DBs
Position
20:17575955..17577042
Genome browser
AA seq
328 aa
AA seq
DB search
MSKSESPKGPEQLQKLFIGGWSFETTDESLRSHFKQRGILTDCVVMRDPNTKRSRGFGFV
TYTAVEEVDPAMHARPHKVDGRVVEPKRTSSKEDSQRPGAHLTVKKIFAGGIKEDTEEHH
LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNWEVRKA
LSKQEMASASCSQRGQSGSGNFGGFRGCGFGGNDNFGHGGNFRGRGGFGGSGGGGGYGGR
GDGYNGFDNDGSNFGGGRRHNDFGNYNNQSSNVGPMKGRNFGGRSSGPYGGGGQILSATK
RPILAKPRNQGGYGSSSSSSSYSGSRRF
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagtcagagtctcccaaagggcctgagcagctacagaagctcttcatcggaggt
tggagcttcgaaacaaccgatgagagtctgaggagccattttaagcaacgggggattctt
acagactgtgtggtaatgagagaccccaacaccaagcgctccagaggctttgggtttgtc
acatacaccgccgtggaggaggtggacccagccatgcacgcaaggccacacaaggtggat
ggaagagtcgtggaaccaaagaggactagctcaaaagaagattctcaaagacctggtgcc
cacttaactgtgaaaaagatttttgctggtggcattaaagaagacactgaagaacatcat
ctaagagattattttgaacagtatgggaaaattgaagtgattgagatcatgactgaccga
ggcagtggcaaaaagagaggttttgcttttgtgacctttgatgaccatgactctgtagac
aagattgtcattcaaaaataccatactgtgaatggccacaactgggaagtaaggaaagcc
ctatcgaagcaagagatggctagtgcttcttgcagccaaagaggccaaagtggttctggc
aactttggtggttttcgtggatgtggttttggtgggaatgacaactttggtcacggaggg
aacttcaggggtcgaggtggcttcggtggcagtggaggtggtggtggatatggtggccgt
ggggatggctataacggatttgataatgatggaagcaactttggaggtggcagacgccat
aacgattttggcaattacaacaatcaatcctcaaatgttggacccatgaaaggacgaaat
tttggaggcagaagctctggcccttatggtggtggaggccaaatactttcggccacgaaa
aggccaatacttgccaaaccacgaaaccaaggtggttatggcagttccagcagcagtagc
agctatagcggtagcagaaggttttaa
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