Canis lupus familiaris (dog): 608906
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Entry
608906 CDS
T01007
Symbol
TRERF1
Name
(RefSeq) transcriptional-regulating factor 1 isoform X6
KO
K26583
transcriptional-regulating factor 1
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cfa03036
]
608906 (TRERF1)
Chromosome and associated proteins [BR:
cfa03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
608906 (TRERF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_6
ELM2
zf-C2H2_4
zf-C2H2
Myb_DNA-binding
zf-C2H2_2
zf-met
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
608906
NCBI-ProteinID:
XP_005627408
Ensembl:
ENSCAFG00000001642
VGNC:
47796
UniProt:
A0A8C0MFI3
A0A8I3MRL1
LinkDB
All DBs
Position
12:complement(10871264..11074860)
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AA seq
1220 aa
AA seq
DB search
MGDQQLYKTNHVAHSGENLFYQQPPLGIHGGLNHNYGNTVTGAGMDAPQASPISPHFPQD
TRDGLGLPVGSKNVGQVDPSRQGGWGGHTGPGNHVQLRSNLTNSNMVWGTPAQAEPADGY
QYTYSQASEIRTQKLTSGVLHKLDSFTQVFANQNLRIQVNNMAQVLHTQSAVMDGAPDSA
LRQLLSQKPMEPPAPALPARYQQVPQQAHPGFPSGLSKSALQVGPHASQGHLYYDYQQPL
AQMPVQGGQPLQAPQVLSQHMQQMQQHQYYPPPQQQQQQAGQQHMSLQEMQQQQQIRPPQ
PQQQQQQQLQLQQRQGPMQIPQYYQSQPMMQHLQEQQQQQQQQMHLQPPSYHRDPHQYAP
EQAHAVQLIQLGSMPQYYYQEPQQPYGHPLCQQSHLPQHQQREDSQPKTYPSDRQAQTML
SSHGDLGPPDAGMGDPASSDLNRLSGALPHRPLLSPSGIHLNNMGPQHQQLSPSALWPQM
HLPDGRAQPGSPESSSQPKGVFGEQFDAKNKLTCSICLKEFKSLPALNGHMRSHGGMRAS
PSLKQEEGEKALPPQPQPQPQPPLPPPPPPPPQLPPEAESLTPMVMPVSIPVKLLPPKPG
SQGFANSIVAAPSARDKPASSMSDDEMPVLVRMTLSPPHSPQGAAPHPPAEIPRKHQPGA
AKAEEPLRSLPEKKKFRHRPEPLFIPPPPSYTASPAASASGATLYQSQLRSPRVLGDHLL
LDPAHELPPYTPPPMLSPVRQGSGLFSNVLIAGHGPGAHPQLPLTPLTPTPRVLLCRSNS
IDGSNVTVTPGPGEQTIDVEPRINIGLRFQAEIPELQDVSALAQDTHKATLVWKPWPELE
NHDLQQRVENLLNLCCSSALPGGGTNSEFALHSLFEAKGDVMAALEMLLLRKPVRLKCHP
LANYHYAGSDKWTSLERKLFNKALATYSKDFIFVQKMVKSKTVAQCVEYYYTWKKIMRLG
RKHRTRLAEIDDSVTSEEEEELEEEEEDPEEDRKSTREEESEVPKSPEPPPGPVLAPAEG
PPLQALGQPSGSFICEMPNCGAVFSSRQALNGHARIHGGTNQVTKARGAIPSGKQKPGNA
QSGYCSVKSSPSHSTTSGETDPTTIFPCKECGKVFFKIKSRNAHMKTHRQQEEQQRQKAQ
KAAFAAEMAATIERTTGPAGAPGLLPLDQLSLIKPIKDVDILDGDVVQQLGGVMEEAEVV
DTDLLLDDQDSVLLQGDAEL
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgggggatcagcagctgtacaagaccaatcacgtggcccacagtggtgagaaccttttc
taccaacagccaccacttggcatccatggtgggctgaaccacaactatgggaatacggtc
acaggggctggaatggatgccccgcaggcgtcacccatctccccccacttccctcaagat
actcgggatggtctaggcttgcctgttggttccaaaaacgttggccaagtggatccctcg
aggcagggagggtggggaggtcatactgggcctggaaaccacgtccagctacgcagcaac
ctgaccaactctaacatggtgtgggggacaccggcccaggctgagcccgccgatggctac
caatatacctactcccaggccagcgagatccggacccagaaactcaccagcggcgtcctg
cacaagctagactccttcacccaggtattcgccaaccaaaacctgcgaattcaggtcaac
aatatggcccaggtgctgcacacccagtcggcagtgatggacggagcccctgacagcgcc
ctccgccagctgctgtcccagaagcccatggagcccccagcgccggctcttcctgctcgc
taccagcaggtgccccagcaggctcaccctggtttccccagtgggctgtccaaatcagct
cttcaggtggggccacacgctagccagggccacctgtattatgactaccagcagccactg
gctcagatgccagtgcagggaggacagccactgcaagcccctcaggtgctgtcccagcac
atgcagcagatgcagcagcaccagtattacccgccgccacagcagcaacagcagcaggct
gggcagcagcatatgtccctgcaggaaatgcagcagcagcagcagatccgcccgccacag
cctcagcagcagcagcaacagcagctgcagctgcagcagcggcagggtccgatgcagata
cctcagtattaccagtcccaacccatgatgcagcacttgcaagaacagcagcagcagcaa
cagcagcaaatgcacctacagcccccttcgtatcacagggacccccaccagtatgccccg
gagcaggcgcatgccgtccagctgatccagctgggctccatgccccagtactactaccag
gagccccagcagccctacggccaccccctctgccagcagagccacctgccccagcaccag
cagcgcgaggacagtcagcccaagacttacccaagcgacaggcaggcccagaccatgctg
agctcccatggcgacctggggcctcccgatgcaggaatgggagacccggcaagctcggac
ctgaaccggctcagcggggccctcccccatcggccgctcctatcccccagcgggatccac
ctcaacaacatggggcctcagcaccagcagctgtctcccagtgccctgtggccccagatg
cacctacctgatggcagagcccagccagggtcccccgagtcaagtagccaaccaaaagga
gtgtttggggagcagtttgatgccaagaacaaactgacgtgctccatctgcctgaaggaa
ttcaagagtctgcctgccctgaatggccacatgcggtcccatgggggaatgagagcctcc
cccagtctcaaacaggaggaaggagagaaggccctgccgcctcagcctcagcctcagccc
cagccgccactgccacctccgcctccgccgccaccgcagctccctcccgaggcagaaagc
ctcacgcccatggtcatgcccgtgtctatccctgtcaagcttctcccgcccaagccaggc
tctcagggcttcgccaacagcatcgttgccgccccctccgccagagacaagccagccagc
tcgatgtcggacgacgagatgcccgtgctcgtgaggatgaccctctctcccccacactca
ccccaaggggctgccccccacccgcctgctgagattcccaggaagcaccagcccggcgcg
gccaaagccgaggagcccctcaggagcttgccggagaagaagaagttccggcaccggccc
gagccgctcttcatcccgcccccgccctcctacaccgccagccccgccgcctcggcctcg
ggcgccacgctgtatcagagccagctgcgctccccgcgcgtgctcggggaccacctgctg
ctggaccccgcccacgagctgcccccctacacgcccccgcccatgctgagcccggtgcgc
cagggctcggggctcttcagcaacgtcctcatcgcgggccacggccccggcgcccacccg
cagctgcccctcacgcccctgacgcccacgccgcgggtgctgctgtgccgctccaacagc
attgatggcagcaacgtgacagtcaccccggggcctggagagcagaccattgatgttgaa
ccacgcatcaacattggcttgaggttccaagcagagatcccagaacttcaggatgtctct
gccttggcccaggacacacacaaggccacactggtttggaagccctggccagaactagaa
aaccatgacctccagcaaagagtggagaacctcctgaacttgtgctgttcaagtgcattg
cccggtggagggaccaattctgaatttgctttgcactctctcttcgaggccaaaggtgat
gtgatggctgctctggaaatgctgctgctgcggaagccagtcaggttaaaatgtcatcct
ttagcaaattaccactatgccggttcggacaagtggacctccctcgaaagaaaactgttt
aataaagcactagccacttacagcaaagactttatttttgtacagaagatggtgaagtct
aagacagtggctcagtgtgtggagtactactacacgtggaaaaagataatgcgcttgggg
cggaaacaccggacacgcctcgcagaaatcgatgattctgtgacaagtgaagaagaggaa
gagttagaggaggaggaggaggacccagaggaagataggaaatccacaagagaagaggag
agtgaagtgcccaagtctcctgagccaccaccaggccctgtgctagctcctgcggagggg
ccgcccctgcaggccctcggccagccctctggctccttcatctgtgagatgcccaactgt
ggcgctgtgttcagctcccgacaggcactgaatggccatgcccgcatccatggtggcacc
aaccaggtgaccaaagcccgaggtgccatcccctctggaaagcagaagccgggcaacgcc
cagagtgggtactgctcagtgaagagctcaccctctcacagcaccaccagcggtgagaca
gaccccactaccatcttcccctgcaaggagtgtggcaaagtcttcttcaagatcaaaagc
cgaaacgcccacatgaaaacgcacaggcagcaggaggaacagcagaggcaaaaggctcag
aaggcagcttttgccgccgaaatggccgccactattgagaggactacggggcccgcgggg
gcgccggggctgctgcctctggaccagctgagcctgatcaaacccatcaaggacgtggac
atcctcgatggcgacgttgtccagcagctgggaggcgtcatggaagaggccgaggtcgtg
gacacggatctcctcttggatgaccaagattcggttttgcttcaaggggacgcggaacta
taa
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