Canis lupus familiaris (dog): 609622
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Entry
609622 CDS
T01007
Symbol
TAF1C
Name
(RefSeq) TATA box-binding protein-associated factor, RNA polymerase I, subunit C isoform X2
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfa03021
]
609622 (TAF1C)
Transcription machinery [BR:
cfa03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
609622 (TAF1C)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1C_HB
TAF1C_beta-prop
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
609622
NCBI-ProteinID:
XP_005620703
Ensembl:
ENSCAFG00000019962
VGNC:
47079
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All DBs
Position
5:68189403..68198337
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AA seq
661 aa
AA seq
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MRWEQLLLDDAFTGGALAWVPGKTPQVGQLVYPAGGALDKLYFQEVNLTPDGDPQALGDP
GHIQLRGPVRQVVTRTVQGESLLAVRSDYHCALWKVSKQGHPAPLQVLQVGKGASGISLS
PHLPGELAVCSRSGAVCLWTPQDGLQQVYKDPETLVFWDPSPWRWADFTAHPRVLTVGDR
TGVKMIDTKGPPGCGLLLFRGGAEASCQKGERVLLTQYLGKCGPEPLLPTVHLICTQFSL
YLVDERLPLVPMLKWDHGLPSAPLWAQLQPPPRPGHPQPLLLGGQGGHLQLLHLAGEGAS
VPRLAGPPQSLPSSSDSLSAFPLLEPRSQWRLQERLKAPTIGLAATIPSSASEPVLSLFQ
LSAAGDVFYQRLRLQAEPRHHSRAPTASWTPQATACCSRWLKTLLEVPPTPPVWAAPTFS
NRCLLTQVEPSKVEQKVPEGLRAAMAEGRLLQQRDLGSLPSAEPPPAPEPGPENELSARL
EAAWEGQVAAWWEKQQGRSSGPRKPPKRHKRRTQLSNTFSSLSGRLDLSDATSPPHSPDR
TSSEARPQPLVTPPSQELTQELWAQGVPSERQQTLRDYMAKLPVQGDAPGEVSSSLSQTA
TPSWQQTLQGGATQLPPRRNPPRGAALPSSQTSSFQATPSRQQTPVLSGSQRHRKKPRMG
F
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgcggtgggagcagctgcttctggatgatgcgttcacggggggcgctctggcctgggtg
cccggcaagacgccccaggttggacagttggtctacccagcgggaggtgctctagacaag
ctctatttccaagaggtcaatctgaccccagatggtgaccctcaggctcttggggaccct
ggccacatccagcttcgaggacctgtccggcaggtggtgacccgcactgtgcaaggggaa
tccctgctggctgtccgctctgactaccactgtgccctgtggaaggtcagtaagcaggga
caccccgcccctctccaggtgctgcaggtcgggaagggggcctcagggatcagcctcagc
cctcacctgcctggggagctggctgtctgcagccgttctggagccgtctgtctgtggact
ccccaggatgggctgcagcaagtctacaaggaccctgagacccttgtgttctgggacccc
tctccctggcgttgggcagacttcactgctcatccccgggtgctgactgtgggtgaccgc
acgggagtgaaaatgattgacactaagggcccacccggatgtggcctgctgctattccgt
gggggagcagaagcatcatgccagaaaggggaacgtgtcctgctgacccagtacctgggg
aagtgcggccctgagcctctgcttcccacggtccatctcatctgtacccagttctcgctc
tacctggtggacgagcgcctccccctggtgcccatgctgaagtgggaccacggcctcccc
tctgctcctctgtgggcccagctgcagccgccaccgcgccccgggcacccacagccactg
ctcctggggggccagggcgggcacctgcagctgctgcacctcgcaggagagggggcgtct
gtaccccggctggcggggcccccccagtctctcccttccagtagcgactccctctccgca
ttccccctgctggagcccaggagtcagtggcggctgcaggagcgtctgaaagcaccaacc
ataggcctggctgccaccatcccgtcctcggcttccgagccagtcctgtcactcttccaa
ctctctgcggctggggatgttttctaccagcgcctccgcctccaggcagaacccaggcat
cactcccgtgcacccacagcttcctggactccccaagccactgcctgctgcagccggtgg
ctaaagaccctgctggaggtacccccgactccgcctgtgtgggcagcacccaccttttcc
aaccgctgtctgctcacccaggtggaaccaagcaaggtggagcagaaagtgccggagggt
ctccgagcagccatggctgaaggacggttgctacagcagagggacttgggctcactcccc
tctgcggagccgccccccgcccctgagccaggccctgagaatgagcttagtgcacgtttg
gaggcagcctgggaaggccaggtggctgcctggtgggagaagcagcagggcaggagctcc
gggcccagaaaaccacctaagcggcacaagcgccggactcagctgtccaatactttctcc
tcactcagtggccgcctggacctctcagatgccaccagcccccctcacagcccagaccgg
acttcatctgaggccaggccacaacccctggtgaccccaccctcccaggagttgactcag
gagctgtgggctcagggtgtcccctcagagcggcagcagaccctccgggactatatggcc
aagctgccagtccaaggggatgccccaggagaggtctcctcatccctctcccagactgcc
acgccctcctggcagcagaccctccagggtggtgcgacccagctgccaccacgaaggaac
cccccgagaggtgcggctctcccgtcttcccagacctccagcttccaggccaccccctcc
aggcaacagacacccgtcctctccggctctcaacgacaccggaagaagccccgcatgggc
ttctga
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