Canis lupus familiaris (dog): 610161
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Entry
610161 CDS
T01007
Symbol
CLP1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
610161 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfa03019
]
610161 (CLP1)
Enzymes [BR:
cfa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
610161 (CLP1)
Messenger RNA biogenesis [BR:
cfa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
610161 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
ATP_bind_1
MMR_HSR1
AAA_18
TniB
AAA_16
AAA_22
nSTAND3
CbiA
Motif
Other DBs
NCBI-GeneID:
610161
NCBI-ProteinID:
XP_005631257
Ensembl:
ENSCAFG00000007815
VGNC:
39354
UniProt:
A0A8C0SK63
A0A8I3P8U6
LinkDB
All DBs
Position
18:complement(38075104..38078316)
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AA seq
425 aa
AA seq
DB search
MGEEANDDKKPTTKFELERETELRFEVEASQSVQLELLAGMAEIFGTELTRNKKFTFDAG
AKVAVFTWHGCSLQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEKEEERGPRVMVV
GPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADVEEGFSI
QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQ
ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDER
IREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD
MVHHLLSVSTAEGTEENLSETSVAGFIVVTSVDLEHQVFTVLSPAPRPLPKNFLLIMDIR
FMDLK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgggagaggaagccaatgacgacaagaagccaacaactaaatttgaactagagcgagaa
acagaacttcgctttgaggtggaggcatctcagtcagttcagttggagctgctggctggc
atggcagaaatatttggcacagagctgacccgaaacaagaaattcacctttgatgctggt
gccaaggtggctgttttcacttggcatggttgttctttacagctgagtggccgcaccgag
gtggcttatgtctccaaggacactcctatgttgctttatctcaacactcacacagccttg
gagcagatgaggaggcaggcggagaaggaagaagagcgaggtccccgggtgatggtcgtg
ggccccactgatgtgggcaagtccacagtgtgccgtctgctgctcaactatgcagtgcgt
ttgggccgccgtcccacttatgtggagctggatgtgggccaggggtctgtttccatccct
ggtaccatgggggccctctacattgagcggccagcagatgtcgaagagggattctctatc
caggcccctctggtgtatcattttggctccaccactcctggcaccaacatcaagctttat
aataagattacatctcgtttagcggatgtgttcaatcaaaggtgtgaagtgaaccgaagg
gcctctgtgagtggctgtgtcattaacacctgtggctgggtcaagggttctgggtatcag
gccctggtgcatgcagcctcagcctttgaggtagacgtggttgtggttctggatcaagaa
cgactgtacaatgaactaaaacgggacctgcctcacttcgtccgaactgtgctgctccct
aaatcagggggtgtggttgaacgctccaaagacttccggcgggagtgtagggatgagcgt
atccgtgagtatttctatggattccggggctgtttctatccccatgccttcaatgtcaaa
ttttcagatgtgaaaatctacaaagttggggcacccaccatcccagactcctgtttgcct
ttgggtatgtctcaggaggacaatcagctcaagctagtaccagtcacacctggacgagat
atggtgcaccaccttctgagtgttagcactgctgagggcacagaggagaacctttctgag
accagtgtggctggcttcatcgtggtgaccagtgtggacctggaacatcaggtgtttact
gttctctctccagccccccgcccactgcctaagaacttccttctcatcatggatatccgg
ttcatggatcttaagtag
DBGET
integrated database retrieval system
