Canis lupus familiaris (dog): 610614
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Entry
610614 CDS
T01007
Name
(RefSeq) collagen alpha-4(VI) chain-like isoform X4
KO
K06238
collagen type VI alpha
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04151
PI3K-Akt signaling pathway
cfa04510
Focal adhesion
cfa04512
ECM-receptor interaction
cfa04820
Cytoskeleton in muscle cells
cfa04974
Protein digestion and absorption
cfa05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
610614
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
610614
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
610614
09142 Cell motility
04820 Cytoskeleton in muscle cells
610614
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
610614
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
610614
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cfa04147
]
610614
00536 Glycosaminoglycan binding proteins [BR:
cfa00536
]
610614
Exosome [BR:
cfa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
610614
Glycosaminoglycan binding proteins [BR:
cfa00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
610614
Hyaluronan
Extracellular matrix or blood plasma proteins
610614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
Kunitz_BPTI
VWA_3
vWA_SIBA-E
VWA_CoxE
SRPRB
Motif
Other DBs
NCBI-GeneID:
610614
NCBI-ProteinID:
XP_013962275
Ensembl:
ENSCAFG00000024259
UniProt:
A0A8C0PSY2
LinkDB
All DBs
Position
23:27396311..27504530
Genome browser
AA seq
2349 aa
AA seq
DB search
MKTWKTFWEFIFLAASFGFIKSQRIVCREASVGDVVFLVDTSLNTQDIRSVRNFLYIMVN
SFNVSKDSIRVGLAQYGDVPRSEFLLSTYPRKGDVLKHIQKLQPKSWGHKMGLALQFLLD
HHFQATAGSRASQGVPQMAMVISNSPAEDPVQEAAKALKRAGVLLYTVGVKDAVLAELKE
IASSPAEKFTSFVPNFPDLGSHAQKLRQQVCDTLAKAAQPVDSVFPACREAALADIVFLV
DSSTSIGPQNFQKVKNFLYSVILGLDISSDQVRVGLAQYNDNIYPAFQLNQYPLKSVVLE
QIQNLPYRTGDTNTGSALEFIRMHYLTEAAGSRAKDSVPQIVILVTDGESNDEVQEAANK
LKEDGVVVYVVGVNVQDVQELQKIASEPFEKFLFNIENFNILQDFSGGILQTLCSAVEGK
IKEFTQAYADVVFLADTSQNTSQASFQWMQNFISRVVGLLDVGRDKYQIGLAQYGGQGHT
EFLLNTYHTRDEMIAHIREHFLLRGGSRRTGKALRYLHQTFFQEAAGSRFLQGIPQYAVV
MTSGKSEDEVWDAAQTLREKGVKVMSVGVQDFDRKELEGMATPPLIYEMQGEDGVRQLMQ
DVSVVIQGTGKPQFGIASEKETRVACPMAIPADLVFLVEEFSRDKQWNFQQVIDFLKTTV
SSLNVHPDGVRIGLVFYSEEPRLEFSLDTFQTPAKMLEHLDKLTYRRRSGRTKTGAALDF
LRNEVFVEERGSRSKQGVLQMAVVITEGFSQDQLSEPASLLRRAGVTIYAVGTHRASESK
DLENIASYPPWKHVISLESFLQLSVVGSKIKNQLCPETVDTSVSISGMGQAPQEDCVHIQ
RADIYFLIDGSSSIKDANFLEMKVFMNEAIKRFQIGPDRVQFGVVQYSDGINIQFALSQY
SSMAELKAAIDDIQQRKGGTMTGEALSRMAQVFVDTARSNVPWYLIIITDGKSEDPVAEP
AEALRGEGVIIYAIGVKNANVMELKEIAKDKTFFTPEFDSLKVIQRDVVQDICSSETCKN
RQADIIFLIDGSESISPNDFEKMKGFVKRMVNQANIGADEIQIGLLQFSSSPQEEFRLNQ
YSSKADIHRAISKVVQMNDGTRTGKALTFTLPFFDSSRGGRPNVHQYLIVITDGVAQDDV
AIPAKALRDRNIVIFAIGVGEAKSAQLLQITDDVQKVYYEENFESLQNLEKKILLKVCIP
QECNIDLSVGIDISTSTRQVQQKLQGLLPGVMQQLALLSNISCSGSGGLNIMFRYLVPGS
NGQLMFDSGFKKYSDEIIKTFLINQTAKNNHMDVDFLQSLGDHTVHLSSAKVKVLLVFTD
GLDDNFQRLKETSELLRSKGLSGLLFVGLEGVHKLEELQELEFGRGFIYNQPLSITLKSL
PSILLKQLDTIVERRCCNIYMKCFGEDGYQGDGGNPGNKGEKGTDGLPGYPGEEGGHGER
GPQGLPGPQGEEGCPGVRGPKGTRGFSGEKGSPGDEGVDGLVGEQGNRGAPGSPGEKGNR
GNRGLPGPPGWPGERGEPGLRGDPGNPGADSYIQGPKGEKGRRGHQGSSSFDGPQGVPGN
VGPQGPRGRRGMPGLKGVRGESGEQGYQGELGSPGSQGLRGRQGPPGNSGHKGLPGAEGV
PGPPGPVGAKGKVGLTGMKGELGVEGATGPQGPQGLRGQPGLLGPDGYGHPGRKGKKGEP
GFPGFPGAQGEDGDPGHRGEKGAKGIRGRRGNAGFPGLIGTPGDQGPPGPVGIKGPKGLA
DVTPCEIIDVIQEKCPCSAGVSKCPVFPSEVVFALDMSNDVSQSDFERMRNILLFLLMKM
EISDSNCPTGARVAIVSYNAKTDYLIRFSDHKGKPSLLQAVRRIPLQGSSGSRNLGDAMR
FVARHVFKRVRSGLLMRKVAVFFQAGWTHGRDAFSTATLELSALDITSTVITFTEEHNLP
SALWADGTNRFHLFVWETEIQQDLEHMAYCTLCYDKCRPSPECVQSMPGPLAGDIDIAFV
VDSSYGVPADVYRTALSLVDAVLEDLEVAAQPGVSPHGSRAALVMHTTPDFWPGAGLPPV
LEGFHLTSYGQKTQMRRYLREALGHPLQGAPALGHALEWTLEKVLLAAPLPRRVQVLFAI
VASETSSWDQEKLRTLSLEAKCKGITLFVLALGQGVGTHELAELEGVASLPSEQHLLHLE
GISGPEVAYAQGFTQAFLNLLKSGINQYPSPELIGKCGGPNRGDTLLQPFRPIRRLPKRQ
FGLSGFADDLEVLEAADVLVEENRKATMKSVTQQEALENYEKNGYGAERNRQERPTRQKQ
TGKERNSGTAYGPCSMDPMVGECQDYILKWYYNKERKVCEQFWYGSCGGNANRFETKEEC
EARCVPTPL
NT seq
7050 nt
NT seq
+upstream
nt +downstream
nt
atgaagacttggaagacattttgggagttcatcttccttgcagctagttttggcttcatc
aagtcacagagaattgtctgcagggaggcatctgtgggagatgttgtgtttctagtggac
accagcctcaacacccaggatatacgcagtgtgcggaacttcttgtacatcatggtaaac
agcttcaatgtcagcaaagacagcatccgcgtggggctggctcagtatggtgatgtgccc
cggtctgaattcctgctttctacctacccccgcaaaggtgatgtgttgaaacacattcaa
aaacttcagcctaaatcttggggccacaagatgggcctggctctgcagtttcttctagat
caccacttccaggcaacagcagggagtcgggccagccagggtgtgcctcagatggccatg
gtgatcagcaacagcccagctgaggatcctgtgcaggaagctgccaaggctttgaagagg
gcaggcgtactactttataccgttggtgtcaaagatgcagttttggcggagctcaaggag
atcgccagcagtcctgcggagaagttcacctcttttgttcccaacttccctgatctgggc
agtcatgctcagaagctgcggcaacaggtctgtgatactttggcaaaggcagctcaacct
gttgacagtgtctttccagcttgcagagaggcagctctggcagacattgtcttcctagta
gatagctcaaccagcattgggccccagaacttccagaaagtgaagaacttcctttactct
gtcatcttggggcttgacatcagcagtgaccaggtccgagtgggacttgctcagtataat
gacaacatctacccagcctttcagctgaaccagtaccctctgaagagtgtggtcctggag
cagattcagaatcttccctaccgtacaggagacacaaacacagggagtgccctggagttt
atcaggatgcactacttgacagaggcagctggcagccgggccaaggacagtgttcctcag
atagttatcctggtgacagatggggagtcaaatgatgaagttcaggaggcagccaacaag
ttaaaagaagatggagttgttgtgtatgtagtaggggtcaatgtccaggatgtccaggaa
ctgcaaaaaatagccagcgagccatttgagaagtttctcttcaacatcgaaaacttcaac
atccttcaggatttctcaggaggcattcttcagactctgtgctcagcagtagagggtaag
ataaaagaattcactcaagcttatgcagatgtggtctttcttgctgacacctcacagaat
acatcacaggccagtttccagtggatgcagaatttcatctccagagtggttggcctgctg
gatgttggcagggacaagtaccagattggtctggctcagtatggtggtcaaggtcatact
gaatttttgctcaatacctaccatacccgggatgagatgattgctcacatccgtgagcac
tttttgctccggggtggctccaggaggacgggcaaagctctgcgataccttcatcagacc
ttcttccaggaggcagcaggaagccggtttctccagggcattccccaatatgcagtggtc
atgacctcaggcaaatctgaagatgaggtctgggatgctgcacaaacactgagggagaaa
ggagtgaaagtcatgtctgtgggtgtacaggactttgacaggaaagaactggaggggatg
gcaactccaccccttatatacgagatgcaaggagaagatggagtcagacagttgatgcag
gatgtgagtgtggttatccaagggactgggaagcctcaattcgggattgcgtctgagaag
gagactcgagtagcatgtccaatggccatcccagctgatttagtcttccttgttgaggaa
ttcagcagggacaagcaatggaatttccaacaagttatcgacttcttaaagaccaccgtc
agctctctaaatgttcatcctgatggtgtgagaattggcttggtcttttacagtgaggaa
ccacgactggagttttccctggacacatttcagaccccagccaaaatgttggagcatttg
gacaaattaacctaccggagaagaagtggaaggaccaagactggtgctgccttggatttc
ctgagaaatgaggtttttgttgaggagaggggcagccgatccaagcagggtgtgctgcag
atggccgtggtcatcacagaaggtttctcccaagaccagttgtctgagccagcttctctc
ctccgtagggcaggggttaccatctatgcggtaggcacccaccgtgcctcagagagtaaa
gacctggaaaatatagcatcatatcctccttggaagcatgtcatctcactggagtccttt
ctacaactctctgttgtgggaagcaagattaagaaccaactctgccctgagactgtggac
acaagtgtttccatttctgggatgggccaggccccgcaagaagactgtgtgcacattcag
agggccgacatttacttcctcatcgatgggtctagcagcatcaaagatgccaattttctc
gaaatgaaggtgttcatgaatgaggcaataaagaggttccaaattgggcccgacagagta
cagtttggagtcgttcagtactcagatggaattaatattcaatttgcccttagccagtat
tccagtatggcagagctgaaagcagccattgatgacatccagcagaggaaaggtggcacc
atgactggtgaggccttgagcaggatggctcaggtctttgtggatactgctcgcagcaat
gtgccttggtatctcataatcatcactgacggtaaatctgaagatccagtggctgagcct
gcagaggcactgaggggagaaggagtcatcatttatgctattggagtcaagaatgctaat
gttatggagctcaaggagatagctaaagataagacctttttcacacctgagtttgattcc
ttgaaggtcatccaaagagatgtggttcaggacatctgctcttcagagacctgtaagaat
aggcaagctgatattatcttcctgatagacggttcagaatccatctccccaaatgacttt
gagaagatgaagggattcgtgaagaggatggtgaaccaagctaatattggtgctgatgaa
attcagattggccttttgcagttcagctcatccccccaggaagaattcaggctcaaccaa
tactcctcaaaggcagacatccacagagccatctcaaaagttgtgcaaatgaatgatggc
actcgtactgggaaagccctgacttttactctgcctttttttgacagttcaagaggaggg
agacccaatgttcatcagtatttgattgtgatcactgatggggttgcacaggatgacgta
gccataccagccaaggctctcagggacaggaacatcgttatttttgccattggggtggga
gaagccaaaagtgctcagcttttgcagattactgatgatgtgcagaaagtgtactatgaa
gagaatttcgagtccctgcagaacttggagaagaaaattcttcttaaggtctgcattcca
caagaatgcaacatagatttgtctgtaggaattgatatttccacttccacaaggcaagtt
cagcagaagcttcaaggattactgccaggggtgatgcaacagttggccctgctttccaac
atcagctgtagtggttctggtggcctcaacatcatgttccgctacttggtccctggttca
aatggccagcttatgtttgactcaggctttaagaagtatagtgatgagattattaagacc
ttcttaattaatcagactgccaagaacaaccatatggatgtggattttttgcagtccctg
ggagatcatactgtccatctctcttctgctaaagtgaaggtccttctagtgtttacagat
gggctagatgataatttccagagactgaaggaaacatcagagcttctccgcagcaaagga
ttgtctgggctcctctttgttggcctggaaggtgtgcataaattagaagagctccaggaa
ctagaatttggcagaggattcatatataatcaacctctgagcatcacactgaaatcactc
ccaagcattttactgaagcaacttgacacaattgtggaaagaagatgctgcaatatatat
atgaagtgttttggagaagatgggtaccagggtgatggcgggaaccctgggaacaaggga
gagaagggtactgatggattacctggttatcctggtgaagaaggtggacatggagaaaga
ggcccccaaggccttcctggaccccaaggtgaggaaggatgcccaggtgtgagaggacct
aagggaactagaggattttcaggagagaagggaagccctggtgatgaaggtgttgatggc
ttggttggggaacagggtaatcgtggagccccagggtcacctggagaaaaaggaaatagg
ggaaatcggggcttgccgggaccacctggatggcctggagagcgcggagagcctgggtta
aggggagaccctgggaatcctggagcagatagttacattcaaggccctaagggagaaaaa
ggaaggcgtggacaccagggaagttctagttttgatgggcctcagggagtacctggaaat
gttggtcctcaggggccaagaggaagacgaggcatgccagggctaaagggtgtgcgtgga
gaatctggtgaacaaggttaccaaggagagcttggatctccaggctcacagggactgaga
ggaaggcaaggaccaccagggaattctggacacaaaggcttaccgggtgctgagggggtt
cctgggcctccagggccagttggtgcgaaaggaaaagttggactaacaggaatgaaggga
gagcttggtgttgaaggagccacaggcccacagggcccacaaggactgagagggcaacct
ggtcttttaggtccagatggatatggacatccgggaagaaaaggaaaaaagggtgaacct
ggatttcctggctttcctggtgcacaaggagaagatggtgacccaggccaccgaggagag
aagggggcaaagggaatcagagggaggaggggtaatgctggctttcctggacttattgga
actccaggcgaccaaggccctccaggaccagtgggtatcaagggccccaaaggtttggca
gatgtgacgccttgtgaaatcattgatgtcatacaagaaaagtgcccttgttcagcaggt
gtttccaaatgcccagtgttccctagcgaagtggtctttgctttggacatgtcgaatgat
gtttcccagtcggattttgagaggatgagaaacattctattgtttctgttaatgaagatg
gaaatcagtgacagtaactgcccaacgggtgccagagtggccatcgtttcatacaatgcc
aaaacagactacctgattcgcttctcagaccacaaggggaagccctcactcctgcaggca
gtcaggaggatccccctgcaagggtcatctggcagcaggaacctcggggatgccatgagg
tttgtggcaagacatgtattcaaacgtgtgcgctctggacttctcatgaggaaagtggct
gtgttcttccaggcaggctggactcatggtagggatgcctttagcactgccactctggaa
ctcagtgcgctggatatcacctctacggtcatcaccttcacggaggaacacaacctcccc
agtgccctgtgggcggatggaaccaacagatttcatctgtttgtctgggagactgagatt
cagcaggacctggagcacatggcctattgtaccctctgctatgacaagtgcagaccatcc
ccagagtgtgtacagagcatgccaggacccctggcaggggacattgacattgcgttcgtg
gtggacagctcctatggcgttccggctgatgtgtaccgcacggccctgagtctagtggat
gccgtgctcgaggacctagaggtggctgcacagcctggcgtgtccccccatgggtcacgt
gctgccctggtgatgcacacaactccagacttctggccgggtgcagggctcccccctgta
ctggagggcttccacctgacatcctatggccaaaagacacagatgcggaggtaccttcgc
gaggctttgggtcaccctctgcagggagctcccgccctgggacatgccctggagtggact
ctggagaaggtgctcctggcagcccctctgcccaggcgggtgcaggtcctctttgccatc
gtggccagtgagaccagcagctgggaccaggagaagctacggactctgtccctggaggcc
aagtgcaagggcatcactctatttgtgctggccttgggccagggcgtgggtacccacgag
ctggccgagctagagggtgtggccagccttccctctgagcagcacctgttgcacctggag
ggaatctcaggcccagaagtagcctatgcccagggattcacacaagccttcctgaacctt
ctaaaaagtggaataaaccagtacccatcccctgaactcattggaaaatgtgggggccca
aaccgaggggacactctgctacaaccttttaggcctatcaggaggttgcctaagcgccag
tttggcctatctggctttgctgatgatctggaagtacttgaagcagcggatgttttggta
gaggagaatagaaaagccacaatgaaatctgtaactcagcaagaagcacttgaaaattat
gaaaagaatggatatggtgctgagagaaaccgacaagaaaggcctacaagacagaaacaa
accggaaaagaaagaaattcaggcactgcctatggtccttgttccatggatccaatggtg
ggtgagtgccaggattacatcctgaaatggtactacaacaaggagaggaaggtctgtgaa
cagttctggtatggaagctgtgggggcaacgctaatcggtttgaaaccaaggaagagtgt
gaggcgcggtgtgtcccaacacccctatag
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integrated database retrieval system
