KEGG   Canis lupus familiaris (dog): 610625
Entry
610625            CDS       T01007                                 
Symbol
TIA1
Name
(RefSeq) nucleolysin TIA-1 isoform X3
  KO
K13201  nucleolysin TIA-1/TIAR
Organism
cfa  Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cfa03019]
    610625 (TIA1)
   03041 Spliceosome [BR:cfa03041]
    610625 (TIA1)
Messenger RNA biogenesis [BR:cfa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     610625 (TIA1)
Spliceosome [BR:cfa03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    610625 (TIA1)
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 RRM_Nup35 RRM_3 Nup35_RRM_2 Calcipressin XOO_2897-deam
Other DBs
NCBI-GeneID: 610625
NCBI-ProteinID: XP_005626250
Ensembl: ENSCAFG00000003341
VGNC: 47363
UniProt: A0A8P0S911 A0A8I3Q2U2
LinkDB
Position
10:complement(68656350..68687391)
AA seq 395 aa
MSNNEDNLSSLRPVYKSRYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFV
EFYEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVG
DLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQW
LGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMR
QTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMI
NPVQQQNQIGYPQAYGQWGQWYGNAQQIGQYMPNGWQVPAYGMYGQAWNQQGFNQTQSSA
PWMGPNYGVQPPPGQNGSMLPNQPAGYRVAGYETQ
NT seq 1188 nt   +upstreamnt  +downstreamnt
atgtcaaataatgaagacaacctcagctctctcaggccagtctacaaaagcagatatgtt
ggcaacctttccagagacgtgacggaagctctaattctccagctctttagccagattgga
ccttgtaaaaactgcaaaatgattatggatacagctggaaatgatccatattgttttgtg
gagttttatgagcatcgtcatgcagctgcagcgctagctgctatgaatgggcggaagata
atgggtaaggaagtcaaagtgaattgggcaacaacccccagcagtcaaaagaaagataca
agcagtagtaccgttgtcagcacacagcgttcacaagatcatttccatgtctttgttggt
gatctcagtccagaaattacaactgaagatataaaagctgcttttgcaccatttggaaga
atatcagatgccagagtggtaaaagacatggcaacaggaaaatctaaaggatatggcttt
gtctcctttttcaacaaatgggatgccgaaaacgccattcaacagatgggtggccagtgg
cttggtggaagacaaatcagaactaactgggcaacccgaaaacctccagctccaaagagt
acatatgagtcaaacaccaaacagctatcctatgatgaggttgtaaatcagtctagtcca
agcaactgtactgtatactgtggaggtgtcacttctgggctgacagaacaactaatgcgt
cagactttttcgccatttggacaaataatggaaattcgagtctttccagataaaggatat
tcatttgttcggttcaattcccatgaaagtgcagcacatgcaattgtttctgttaatgga
actaccattgaaggtcatgttgtgaaatgctattggggtaaagaaactcttgacatgata
aatcctgtgcagcagcagaatcaaattggatatccacaagcttatggccagtggggccag
tggtatggaaatgcacaacaaattggccagtatatgcctaatggttggcaagtacctgca
tatggaatgtatggccaggcatggaatcaacagggatttaatcaaacacagtcttctgca
ccgtggatgggaccaaattatggagtgcagccacctccaggacagaatggcagcatgttg
cctaatcagcctgcagggtatcgagtggcagggtatgaaacccagtga

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