Canis lupus familiaris (dog): 610649
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Entry
610649 CDS
T01007
Symbol
COL6A6
Name
(RefSeq) collagen alpha-6(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04151
PI3K-Akt signaling pathway
cfa04510
Focal adhesion
cfa04512
ECM-receptor interaction
cfa04820
Cytoskeleton in muscle cells
cfa04974
Protein digestion and absorption
cfa05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
610649 (COL6A6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
610649 (COL6A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
610649 (COL6A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
610649 (COL6A6)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
610649 (COL6A6)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
610649 (COL6A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cfa04147
]
610649 (COL6A6)
00536 Glycosaminoglycan binding proteins [BR:
cfa00536
]
610649 (COL6A6)
Exosome [BR:
cfa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
610649 (COL6A6)
Glycosaminoglycan binding proteins [BR:
cfa00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
610649 (COL6A6)
Hyaluronan
Extracellular matrix or blood plasma proteins
610649 (COL6A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
vWA_SIBA-E
VWA_CoxE
Integrin_beta
Motif
Other DBs
NCBI-GeneID:
610649
NCBI-ProteinID:
XP_022264328
Ensembl:
ENSCAFG00000006035
VGNC:
49850
LinkDB
All DBs
Position
23:27732899..27874490
Genome browser
AA seq
2200 aa
AA seq
DB search
MKMLLILFLIIICSPVSMNKDSGPEYADVVFLVDSSDHLGAKSFPLVKTFINRMISSLPI
EAHKYRVALAQYSDQLHSEFQLGTFKSRNPMLNHLKKNFGFVGGSLRIGQALREAHRTYF
SRPDSGRDKKQFPPILVVLASAESEDDVEEPSKALRGDGVRIISVGLQSASEQELKAMAT
GQFHFNLRSARDLGAFAPNMTQIIKEATQYREVATDDILVEVCQGPSVADLVFLLDVSVN
GSQENFDYLKEFLEESVSALDIKENCMRVGLVTYSNETKVINSLSRGVNKSEVLQNIQNL
SPRAGKAYTGAAIRKIRKEVFSARNGSRKNQGVPQIAVLVTHRPSEDNVTKAAVNLRREG
VTIFTMGIEGASDSQLEKIASHPAEQHVSKLKTFSELAAHNQTFLKKLRNQITLTVSVFS
ERTETLKSGCVDTEEADIYLLIDGSGSTQATDFHEMKTFLSEVVGMFNIAPQKVRVGAVQ
YADSWDLEFEINKYTNKHDLGKAIENIRQMGGNTNTGAALNFTLGLLQKAKKQRGNRVPC
HLVVLTNGMSKDSILEPANRLREELIRVYAIGVKEANQTQLREIAGEDKRVYYVHDFDAL
KDIRNQVVQEICAEEACKEMKADIMFLVDSSGSIGLENFIKMKTFMKNLVSKSQIGADRV
QIGVVQFSDINKEEFQLNRYMSQNEISNAIDRMAHIGETTLTGSALTFVSQYFSPAKGAR
PNVRRFLILITDGEAQDIVKDPAVALRQEGIIIYSVGVFGSNVTQLEEISGRPEMVFYVE
NFDILQHIEDDLVFGICSPREECKRIEVLDVVFVIDSSGSIDHDEYNIMKDFMVDLVKKA
DVGKNQVRFGALKYADDPEVLFYLDDLSTKWEVISVLQKDQPMGGNTYTAEALGFSDHMF
TEARGSRLHKGVPQVLIVITDGESHDADKLNDTAKALRDKGILVLAVGIAGANPVELLAM
AGSSDKYFFVETFGGLKGIFSDVSASVCNSSKVDCEIEKVDLVFLMDGSNSIHPDDFKKM
KEFLASVVQDFDVSVNRVRIGAAQFSHTYRPEFPLGTFIGKKEISFQIENIQQIFGYTHI
GAALREVGDYFRPDMGSRINAGTPQVLLVLTDGQSQDEVAQAAEELRHKGIDIYSVGIGD
VDDQQLIQITGTADKKLTVHNFDELTKVKKRIVRNICTSGGESNCFVDVVVGFDMSTHEN
GQTLLEGQSWIETYLQDLLRAISSLNGVSCEVGTETQVSVAFQVTNAVEKYSPKFEIYSE
NILNSLKDITVKGPSLLNANLLSSLWDAFQNKSAARGKVVLLFSDGLDDDTEKLEQKSDE
LRKEGLNALITVALDGATDSSDLADLLYIEFGKGFEYRTQLTIGMRDLGSRLSKLLVNVA
ERTCCCLFCKCIGGDGTMGDPGPPGKKGSPGFKGSEGYLGEEGVAGDRGASGPMGEQGTK
GCYGAKGPKGNRGLNGQEGEVGESGIGGLNGEPGDSGLPGEKGEKGNEGSQGSPGKRGVS
GDRGSKGQRGDPGVPGFDNTIEGPKGLKGERGRQGRRGWPGPPGTPGSRRKTAAHGRRGH
TGPQGKTGIPGPDGLEGSWGVKGPQGPRGETGVKGEKGGLGSKGPQGPPGQGGEAGSPGH
LGSQGTKGEPGDLGEKGAIGLPGPRGLPGDDGNPGYGSIGRKGAKGQDGFPGESGPKGEM
GDLGGPGETGPKGARGKRISTGLPGEMGSPGEPGPPGRKGVKGARGLASFSMCELIQYVR
DHSPGGHGKPECPVHPTELVFALDQSRDVTKQEFERMKELMSSLVRGVRVRENSCPVGAR
IAILTYTSHARHLVRFSDAYKKQQLLREIEAIPYERSSDSREIGGVMRFISRNVFKRTLP
GSHTRRIATFFSSGQSADAQTIATAAMEFSALDIVPVVIAFSNVPSIKRAFAIDDTGTFQ
VIMVPSGTDYAPALERLQRCTFCYDVCKPDTFCDEAKPPPAQSYMDAAFLLDSSRHVQSA
EFEDMRHFLGALLDHFEISPEPETSVTGDRVALLSHAPPNFLPNTQKSPVKTEFNLTTYN
SKRLMKRHMEQSVQQLNGDAFIGHALQWTLDNIFLNTPNMRRNKVIFVISAGETNHLDRE
TLKKESLRAKCQGYALFVFSLGPAWNDKELEDLASYPLDHHLVQLGRIHKPDHRYSVNFV
KSFVNSIRRAINKYPPISFKMKCNRLTSTDVKQPPRQWRR
NT seq
6603 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgctgctgattttattcctcataataatttgttctcctgtctctatgaacaaa
gattctggtcctgagtatgcagatgtcgtgtttctggtggacagctccgatcacctggga
gctaagtccttccctcttgtgaaaacattcatcaacagaatgatcagcagcctccccatc
gaggcccacaagtaccgcgtggccctggcccagtacagcgaccagctccacagtgagttc
cagctgggcacgttcaagagcaggaaccccatgctgaaccacctcaagaagaacttcggc
ttcgttggtggctccctgcgcataggccaagccctccgggaggcccacaggacctacttc
tccaggcccgacagcgggagggacaagaagcagtttcccccgattctggtggtcctggct
tcggccgagtccgaggatgacgtggaggagccctcgaaggccctgcggggagatggagtg
agaatcatctccgtggggctgcagagcgcgtctgagcaggagctgaaggccatggccacg
gggcagtttcatttcaacctgcggtcggccagggaccttggagcgtttgccccaaacatg
acgcagatcatcaaggaagccacccagtacagggaggtagccaccgatgacattcttgtg
gaagtttgccaaggcccgtctgtggctgacttggtgttcctgttggatgtgtccgtcaac
ggcagccaggagaactttgactatcttaaggaattcctggaagagagtgtatctgccctt
gacataaaggaaaactgcatgagggttggcctggtgacctacagcaatgagacgaaggtg
ataaactcactcagcaggggcgtaaataagtcggaggttctccagaatatacagaacctc
tctccccgggccgggaaggcctacacaggggctgccatcagaaaaatcaggaaggaagtg
ttcagtgcacgcaacggcagtcggaagaatcagggggtgccccagattgcggtgctggtg
acccacaggccctcagaggataacgtgaccaaggcagctgttaacctccggcgcgagggg
gtgaccatcttcaccatgggcatagagggggccagcgacagccagctggagaagatcgcc
tctcaccctgccgagcagcacgtgtccaaactgaaaaccttctccgagctggccgcgcac
aaccagacgttcctgaagaagctgcggaaccagatcacgctcactgtctctgtcttctcg
gaacgcactgaaacgctcaaatccggttgtgtggatactgaagaagcagacatctatctg
ctcattgatggctctggaagcacccaggccacagacttccacgaaatgaagaccttcctg
tccgaggttgtaggaatgttcaacattgcaccccaaaaggtgcgggttggggctgttcag
tatgcggacagctgggacctggaatttgagatcaataaatacactaataagcatgacttg
ggaaaggccattgagaacattcggcagatgggtgggaacacaaacacgggtgcagcccta
aatttcacactagggctgttgcaaaaagcaaagaagcaacgaggaaacagagtgccctgt
catcttgttgtcctgacgaatggcatgtccaaggatagcatcttagagcctgcaaacaga
ctgagagaagaactcattcgcgtttatgccatcggggtcaaggaggccaaccaaacacag
ctgcgagaaattgcaggcgaggacaagagggtgtactatgtgcatgactttgatgcttta
aaagacataagaaaccaagttgttcaagaaatctgtgctgaagaagcatgcaaagagatg
aaagcagacatcatgtttctggtggacagttctggcagtataggacttgaaaacttcatc
aaaatgaaaacatttatgaaaaacctggtgagcaaatctcagattggggcagatcgagtg
cagatcggcgtagtccagttcagtgacatcaataaggaggaattccagctcaacagatat
atgtcccaaaacgaaatttcaaatgcaatagaccggatggctcacattggggaaaccacc
ttgactggtagtgccctgaccttcgtttctcagtacttcagccctgccaaaggggcccgg
cccaatgtcaggaggtttctcatcctcatcactgacggtgaagctcaggacatagtcaag
gacccagcagtagcacttcgacaagaaggcataattatctactctgtgggggtgtttggt
tccaatgtcactcagctcgaggaaatcagcgggaggccggagatggttttttatgttgag
aattttgatattctgcaacacattgaagatgatcttgtttttggaatatgcagcccccgt
gaagaatgcaagcggattgaggttttggatgttgtgtttgtaattgacagttctggaagc
attgaccatgatgaatataatatcatgaaagactttatggttgacttggtgaaaaaagct
gatgttggcaagaatcaagtccgatttggggctctgaagtatgcagatgacccggaggtg
ctgttttatctggatgaccttagcacaaaatgggaggtgatttcggtgcttcagaaggac
cagcccatggggggcaatacttacactgctgaggcattaggcttctcagaccacatgttc
accgaagcccgtggcagccgtctgcacaaaggggtcccccaagtcctcattgtgatcact
gatggggaatcccacgatgcggataagctcaatgacacagccaaggccttgagggacaaa
ggcatccttgtcctggctgtggggatcgccggtgcaaatcctgtggagctgctagctatg
gcaggatcgagtgataagtacttcttcgtggagacgtttggaggcctgaagggaatattt
tcagatgtgtcagccagtgtatgtaactcttcaaaagtagattgtgaaattgaaaaagta
gatcttgtcttcctcatggatggttcaaacagcattcatccagatgacttcaagaagatg
aaggaattcttggcatctgttgttcaagactttgatgtcagtgtcaacagagtgcgtata
ggtgctgcccagtttagccatacctatcggccagaatttccactaggaactttcataggc
aaaaaggagatctcatttcagattgaaaacatccagcaaatctttggatacacacacatc
ggtgccgcactccgagaggtgggggattacttccggccagacatgggcagccggataaac
gcaggtaccccacaggtattgctggtcctcacagatggccagtctcaagacgaggtggct
caggctgctgaagagctgagacacaaaggtattgacatttattctgtgggcattggggat
gtggatgaccagcagctcattcagatcaccgggactgcagataaaaaactgacggttcat
aactttgatgaactgacaaaggtcaagaaaaggatagttcgcaacatctgtacctcgggg
ggtgagagcaattgttttgtcgatgttgtggtgggatttgacatgtcaactcatgagaat
gggcaaactttgctcgaaggtcaatcttggatagaaacctaccttcaagaccttttacgt
gccatcagctccctcaatggggtaagctgtgaggtgggcacagagactcaagttagcgtg
gcttttcaagtgacgaatgctgtggaaaaatattcccccaagtttgagatctatagtgaa
aacatactgaacagcttgaaggatataactgttaaaggaccatctctactcaatgcaaat
ctcttgagttctctgtgggatgcatttcagaataaatcagctgctcgaggaaaggtggtt
ctcttattttcagatggattggatgatgacactgaaaagcttgaacaaaaatctgatgaa
cttagaaaagaaggcctgaatgccctcataactgttgccctggatggagccactgattca
agtgacctggctgatcttctctacattgaattcgggaaagggtttgagtacaggacgcag
ctcactattggaatgagagaccttgggagccgactgtcaaagctactggttaatgttgct
gaaaggacatgctgctgtttgttctgcaaatgcattggaggggatggcacaatgggagat
cctggaccaccggggaaaaagggatccccaggttttaaaggcagtgagggctatctggga
gaggaaggtgttgctggagacagaggagccagtggaccaatgggagagcaaggtactaag
ggatgctatggcgccaaaggtcctaagggaaacaggggactaaatggacaggagggagaa
gttggagaaagcggaattggcggattaaatggagaaccgggtgacagtggtcttcctgga
gaaaaaggagaaaagggtaatgaaggatcccagggaagcccaggaaagcgaggagtttct
ggtgaccgaggctcaaaggggcagcgaggagaccccggagttcctggatttgacaatacc
atagaaggacctaagggcttgaaaggagaacgtggaagacaaggtagaagaggctggcca
ggcccccctggaacaccaggctccagaagaaagacagcagctcatggccgaaggggacat
acaggcccacaggggaaaacaggcatcccaggcccagatggacttgaaggctcatgggga
gttaagggccctcagggtcccagaggagagactggtgtgaaaggcgaaaaaggaggtctg
ggaagtaaaggtcctcaggggcctccaggacaaggaggagaagcagggagtccaggccat
ctgggaagccaaggaactaaaggagaacctggagatttgggagaaaaaggagctattggc
ctcccgggtcctcgaggcttaccgggtgatgatggcaacccaggttatggtagcattgga
aggaaaggagcaaaggggcaagatggatttcctggagaaagtggtcctaagggtgagatg
ggggaccttggtggtccaggagaaactggacccaagggagctagaggcaagaggatatcc
actgggcttccgggagagatgggatcccctggggagccaggacctcctggacgcaagggt
gtgaaaggggccagaggattggcttcattttctatgtgtgagctcattcagtatgtacgg
gatcacagccctggcggacatggaaaaccagaatgccccgtgcatcccaccgaattggtg
tttgccttggaccagtctcgggatgtcaccaagcaggaattcgagcgcatgaaggagctg
atgtcttccctggtgagaggcgtccgggtccgggagaacagctgcccggtgggcgcccgc
atcgccatcctcacctacacctctcacgcccggcacctcgtccgcttctcagacgcctac
aagaagcagcagctcctccgggagattgaagctatcccttacgagaggtcctcggacagc
agggagatcggcggggtgatgaggtttatctccaggaatgtcttcaagcgaacgcttcca
ggctctcacacaagaagaatcgccaccttcttcagcagcggtcagtctgcagatgcccag
accattgccacggcagccatggaattcagtgcccttgacatcgttccggtggtcatcgcg
ttcagcaacgtgccctccatcaagcgtgcatttgcaattgatgacactggcacattccaa
gtaataatggttccatccgggactgactacgcgccagcattagagagactacagcggtgt
actttctgctatgatgtatgcaagccagacactttttgcgatgaagccaaaccaccccct
gcacagtcttacatggatgctgctttccttctggacagctctcggcatgtgcaaagtgct
gaatttgaagacatgagacactttttgggagcactcttagatcactttgagattagccca
gagcctgagacctctgtcactggagaccgggtggccctattaagccatgctccccccaat
ttcctacccaacactcagaagagtcctgttaaaactgagttcaaccttaccacctacaat
agtaaacgcctcatgaagaggcacatggaacaatcagttcaacaactaaatggagatgct
tttattggtcatgccttacagtggaccctggacaatatctttttaaatacacccaacatg
agaagaaacaaagtcatatttgtcatatctgctggggaaaccaatcacttggacagggaa
accttaaagaaagaatccttaagagccaaatgtcaaggttatgccctatttgtgttttcc
cttggccctgcttggaatgacaaagaactagaagatctagccagctaccctttggatcac
cacttggtccagcttggccgaattcataaacctgatcacagatatagtgtgaattttgtg
aaatcctttgtaaactcaatcaggcgtgcaatcaacaaatatccaccaataagcttcaaa
atgaagtgcaatagactcacctctacagatgtgaagcagcctccacggcagtggagaagg
taa
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integrated database retrieval system
