Canis lupus familiaris (dog): 611552
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Entry
611552 CDS
T01007
Symbol
PRPF19
Name
(RefSeq) pre-mRNA-processing factor 19 isoform X1
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03040
Spliceosome
cfa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
611552 (PRPF19)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
611552 (PRPF19)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfa03041
]
611552 (PRPF19)
04121 Ubiquitin system [BR:
cfa04121
]
611552 (PRPF19)
03400 DNA repair and recombination proteins [BR:
cfa03400
]
611552 (PRPF19)
Enzymes [BR:
cfa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
611552 (PRPF19)
Spliceosome [BR:
cfa03041
]
Complex B
Other components
Prp19 complex
611552 (PRPF19)
Complex C
Prp19-CDC5 complex
611552 (PRPF19)
Ubiquitin system [BR:
cfa04121
]
Ubiquitin ligases (E3)
U-box type E3
611552 (PRPF19)
DNA repair and recombination proteins [BR:
cfa03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
611552 (PRPF19)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
Beta-prop_IFT122_1st
WD40_WDHD1_1st
Beta-prop_EML_2
Prp19
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
DSE1_N
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_Aladin
Beta-prop_NOL10_N
Beta-prop_EIPR1
Beta-prop_TEP1_C
CFAP251_N
Beta-prop_WDR41
NBCH_WD40
Beta-prop_HPS5
ASA1
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_DCAF4
PAC11
PEP5_VPS11_N
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_VPS8
Beta-prop_WDR19_1st
U-box
Beta-prop_SPT8
PROPPIN
Beta-prop_Nup120_160
Beta-prop_ACSF4
DNAI3_WD
Cytochrom_D1
RMC1_N
Beta-prop_WDR35_TULP_N
B-prop_COPA_B_2nd
Beta-prop_DCAF12
Alpha_humulene_synt
DUF1830
zf-Nse
CCDC13
ATG16
Cep57_MT_bd
Motif
Other DBs
NCBI-GeneID:
611552
NCBI-ProteinID:
XP_013976791
Ensembl:
ENSCAFG00000016438
VGNC:
45019
UniProt:
A0A8I3PCM8
LinkDB
All DBs
Position
18:53963071..53973417
Genome browser
AA seq
522 aa
AA seq
DB search
MCTGCLLGICIALEVRPAVIPVLRVSNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPI
NNQPLSEEQLIDIKVAHPIRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQE
LSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGLIVPQAVPSSQPSVAGAGEPMDL
GELVGMTPEIIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIP
GILALDLCPADTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSA
SPDATIRIWSVPNASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLT
KVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSE
NGYYLATAADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYIC
KQWTEILHFTEHSGLTTGVAFGHHAKFIASTGMDRSLKFYSL
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaccgggtgcctgctgggcatctgcatcgcgctggaagtcagaccagctgtaatc
cctgtcctcagagtctccaatgaagtgccagagcacccgtgtgtgtcccctgtctctaat
catgtgtatgagcggcggctcattgagaagtatattgcggagaatggcacagaccccatc
aacaaccagcctctgtctgaggagcagctcatcgatatcaaagttgctcacccaatccgg
cccaagcctccctctgcaaccagcatcccagccattctgaaagctttgcaggatgagtgg
gatgcagtcatgctgcacagcttcactctgcgccagcagctgcagacaacccgtcaagag
ctgtcccacgctctgtaccagcatgatgctgcctgccgtgttattgcccggctcactaag
gaagttacagccgcccgagaagctctggccaccctgaaaccacaggctggactcatcgtg
ccccaggctgtgccgagctcacagccaagtgttgcaggtgcaggtgagccgatggatttg
ggtgagctggtgggaatgacccccgagattatccagaagcttcaagacaaggccactgtg
ctcaccacggagcgtaagaagagagggaagacggtacccgaagagctggtgaagccagag
gagctaagcaaataccggcaggtggcatcccacgtgggcttgcacagtgccagcattcct
gggatcctcgccctggacctctgccctgctgacaccaacaagatccttactggtggggcc
gacaaaaatgttgttgtcttcgacaagagttctgagcaaatcctggccacccttaaaggc
cataccaagaaagtcaccagtgtggtgtttcacccttcccaggagctggtgttttctgcc
tctccagatgctactatcaggatttggtcagtcccgaatgcgtcctgtgtgcaggtggtt
cgggcccatgagagtgctgtgacaggcctcagcctccatgccactggggactatctcctg
agctcctctgatgaccagtactgggccttctctgacatccagacagggcgggtgctcacg
aaggtgacagatgagacctctggctgttctctaacctgtgcgcagttccatcctgatgga
ctcatttttggaacaggcaccatggactcacagatcaagatctgggacttgaaggagcgc
accaatgtggccaacttccccggccactcgggccccatcaccagcattgccttctcagag
aatggctactacttggctacagcggctgatgactcctctgtcaagctctgggatctgcgc
aagcttaaaaacttcaagacgctgcagctggataacaactttgaggtgaagtcactgatc
tttgaccagagcggcacctacctggcccttgggggcacggatgtccagatctacatctgc
aagcagtggacagagattcttcatttcacagagcatagtggcctgaccacaggggtggcc
tttgggcaccacgccaagttcatcgcttcaacgggcatggacaggagcctcaagttctac
agcctgtag
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integrated database retrieval system
