Canis lupus familiaris (dog): 611686
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Entry
611686 CDS
T01007
Symbol
LSM5
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03018
RNA degradation
cfa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
611686 (LSM5)
09123 Folding, sorting and degradation
03018 RNA degradation
611686 (LSM5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfa03019
]
611686 (LSM5)
03041 Spliceosome [BR:
cfa03041
]
611686 (LSM5)
Messenger RNA biogenesis [BR:
cfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
611686 (LSM5)
mRNA degradation factors
5'-3' decay
Lsm complex
611686 (LSM5)
Spliceosome [BR:
cfa03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
611686 (LSM5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM14
Motif
Other DBs
NCBI-GeneID:
611686
NCBI-ProteinID:
XP_013974691
Ensembl:
ENSCAFG00000048678
UniProt:
A0A8C0N6W8
A0A8I3S385
LinkDB
All DBs
Position
14:complement(44292332..44295390)
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AA seq
91 aa
AA seq
DB search
MAANATTNPSQLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEIT
PEGRRITKLDQILLNGNNITMLVPGGEGPEV
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaacgctaccactaacccgtcgcagctgctgcctctagagctcgtggacaaa
tgtataggatcaagaattcacattgtgatgaagagtgataaagaaattgttggcacactt
ttgggatttgatgactttgtcaatatggtactggaggatgtcactgagtttgaaatcaca
ccagaaggaagaaggatcactaaattagatcaaattttgctaaatggaaataatataaca
atgctagttcctggaggagaaggtcctgaagtatga
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